Factsheet for Os06t0184500-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89339	Sorghum	cytosol	79.81	80.94
Zm00001d045098_P001	Maize	cytosol	78.11	78.96
TraesCS7B01G052800.1	Wheat	cytosol	72.2	71.21
TraesCS7D01G150700.2	Wheat	cytosol	72.2	71.1
TraesCS7A01G149100.1	Wheat	cytosol	72.05	70.84
HORVU7Hr1G030460.8	Barley	cytosol	69.88	68.18
GSMUA_Achr4P01950_001	Banana	cytosol	42.08	66.42
GSMUA_Achr3P04740_001	Banana	cytosol	55.28	60.34
Os09t0420900-01	Rice	cytosol	55.43	57.77
HORVU7Hr1G097110.6	Barley	cytosol	48.45	57.56
VIT_04s0008g06630.t01	Wine grape	cytosol	54.81	56.94
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	56.52	56.09
KRH05372	Soybean	cytosol	52.33	54.71
KRH15648	Soybean	cytosol	52.02	54.47
PGSC0003DMT400022573	Potato	cytosol	51.24	53.66
Solyc08g006870.2.1	Tomato	cytosol	50.62	53.01
CDX68790	Canola	cytosol	46.74	52.62
KRH52322	Soybean	cytosol	49.84	52.54
AT4G31820.1	Thale cress	cytosol	46.12	52.01
Bra011301.1-P	Field mustard	cytosol	46.58	51.99
CDX75198	Canola	cytosol	46.58	51.99
KRH61660	Soybean	cytosol	47.67	48.65
Os03t0205700-01	Rice	cytosol	43.48	46.28
Os03t0609800-02	Rice	cytosol	45.34	46.06
Os12t0583500-01	Rice	cytosol, plasma membrane	45.19	45.61
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	32.3	33.17
Os12t0613250-00	Rice	plasma membrane	32.45	32.15
Os04t0636500-01	Rice	plasma membrane	31.99	31.99
Os08t0130600-01	Rice	plasma membrane	31.83	31.98
Os01t0780600-01	Rice	plasma membrane	31.37	30.65
Os09t0266600-01	Rice	cytosol	18.79	29.09
Os03t0206700-00	Rice	plasma membrane	28.11	28.91
Os02t0568200-00	Rice	cytosol	33.07	27.95
Os03t0767600-01	Rice	cytosol	28.42	26.79
Os03t0347700-01	Rice	mitochondrion, plastid	27.64	26.53
Os03t0738900-00	Rice	nucleus, plasma membrane, plastid	26.4	25.91
Os11t0118500-00	Rice	plastid	25.31	25.35
Os12t0117600-01	Rice	plastid	25.62	25.35
Os12t0117400-01	Rice	plasma membrane	20.81	23.51
Os11t0118300-01	Rice	cytosol, mitochondrion, nucleus	21.27	22.2
Os02t0594700-01	Rice	cytosol, mitochondrion	6.37	21.58
Os12t0613300-02	Rice	nucleus	0.93	2.02

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4340329	ProteinID:BAD72520.1	ProteinID:BAF18908.1	ProteinID:BAS96498.1
InterPro:BTB/POZ_dom	ProteinID:EAZ36060.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	EnsemblPlantsGene:Os06g0184500	EnsemblPlants:Os06t0184500-00	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF75	UniProt:Q5SMN3	InterPro:SKP1/BTB/POZ_sf
SUPFAM:SSF54695	UniParc:UPI000046D50E	RefSeq:XP_015644472.1	SEG:seg	:	:

Description

BTB domain containing protein. (Os06t0184500-00)

Coordinates

chr6:-:4229401..4233324

Molecular Weight (calculated)

70018.5 Da

IEP (calculated)

5.969

GRAVY (calculated)

-0.124

Length

644 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQTDGGGD SRYVLSELPS DIVIHVEEAR FYLHKFPLLS KSSLLQRLII EASQNGTDEV YIHDIPGGVK IFEICAKFCY GMVVTLNAYN
101: VVAARCAAEL LGMTEDVDKS NLVFKIEVFL NSGIFRSWKD SIIALQTTDA LLPWSEQLKL AARCIDSIAS KATSNPCNVV WSYTYNRKSA SSDEIVEARK
201: NSQPVPKDWW VEDLCELDVD LYKRVMVAVK SRGRITSDVV GEALKAYASR WLPECFDTAA IDDDAYSMAY NHLLETIVWL LPSDKGSSCC SCRFFLKLLK
301: VAVLIGSGEM LKEELMDRVI LQLHKASVCD LLIPARPPAL TTYDIQLVLT LVGRFMRRAG VTEDGIFLNN LDQEMFETDV DDESLLALSK IVDGYLAEVA
401: SDPNLSVSSF VAVATSMPDA ARATHDGLYT AIDVFLKLHP NLPKAEKRKI SSLMDVKKLS KEACIHAAQN DRLPLRVVVQ VLFFEQLRAA AGGNNPAAAA
501: AAASGGIARL LVEEEDDDDD DVGGGGGGDW SKSRALPTPT PSLLKKQLGS LKLAAAGDEG GGGDDGRQLA RVSSVANQSS RLSLSSRSRR MFDRLWAGGK
601: PPGGEVVSKS SDTSGSSQSP RSSAKPPASK SSSSSSRNRR YSVS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.