Factsheet for VIT_04s0008g06630.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15648	Soybean	cytosol	74.68	75.28
PGSC0003DMT400022573	Potato	cytosol	74.35	74.96
KRH05372	Soybean	cytosol	74.35	74.84
Solyc08g006870.2.1	Tomato	cytosol	74.03	74.63
KRH52322	Soybean	cytosol	70.97	72.01
GSMUA_Achr4P01950_001	Banana	cytosol	46.29	70.34
KRH61660	Soybean	cytosol	69.35	68.15
GSMUA_Achr3P04740_001	Banana	cytosol	61.45	64.58
AT4G31820.1	Thale cress	cytosol	56.77	61.65
CDX68790	Canola	cytosol	55.16	59.79
Os09t0420900-01	Rice	cytosol	59.03	59.22
Bra011301.1-P	Field mustard	cytosol	54.52	58.58
CDX75198	Canola	cytosol	54.52	58.58
EER98911	Sorghum	cytosol	57.9	58.0
TraesCS5B01G222700.2	Wheat	cytosol	58.55	56.99
TraesCS5D01G231300.1	Wheat	cytosol	58.39	56.83
HORVU5Hr1G064620.1	Barley	cytosol	58.39	56.83
Zm00001d005769_P001	Maize	cytosol	57.1	56.64
EER89339	Sorghum	cytosol	57.26	55.91
Zm00001d045098_P001	Maize	cytosol	56.77	55.26
Os06t0184500-00	Rice	cytosol	56.94	54.81
TraesCS5A01G223800.1	Wheat	cytosol	58.39	54.6
Zm00001d020512_P001	Maize	cytosol	57.1	54.55
TraesCS7B01G052800.1	Wheat	cytosol	55.97	53.14
TraesCS7D01G150700.2	Wheat	cytosol	55.97	53.06
TraesCS7A01G149100.1	Wheat	cytosol	55.97	52.98
VIT_07s0129g00250.t01	Wine grape	cytosol	53.06	52.31
VIT_03s0091g00680.t01	Wine grape	cytosol	52.42	52.08
HORVU7Hr1G030460.8	Barley	cytosol	53.23	50.0
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	45.16	43.14
HORVU7Hr1G097110.6	Barley	cytosol	37.26	42.62
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	42.9	42.22
VIT_00s1395g00010.t01	Wine grape	cytosol	30.16	40.04
VIT_00s0665g00050.t01	Wine grape	cytosol	30.32	37.52
VIT_00s0194g00080.t01	Wine grape	cytosol	34.68	36.26
VIT_13s0019g04420.t01	Wine grape	cytosol	35.65	35.7
VIT_10s0003g04490.t01	Wine grape	cytosol	35.65	34.97
VIT_08s0040g01800.t01	Wine grape	cytosol	34.68	34.46
VIT_03s0038g00270.t01	Wine grape	cytosol	35.81	32.94
VIT_08s0056g00610.t01	Wine grape	cytosol	31.45	32.39
VIT_06s0004g08230.t01	Wine grape	mitochondrion	29.68	32.17
VIT_00s0207g00230.t01	Wine grape	cytosol	32.58	31.81
VIT_07s0005g06300.t01	Wine grape	cytosol	31.45	31.66
VIT_07s0129g00380.t01	Wine grape	cytosol	31.45	30.66
VIT_07s0104g01440.t01	Wine grape	plastid	30.48	29.95
VIT_06s0061g01140.t01	Wine grape	cytosol	26.77	28.62

Protein Annotations

EntrezGene:100264499	wikigene:100264499	Gene3D:3.30.710.10	MapMan:35.1	EMBL:AM428196	InterPro:BTB/POZ_NPY1
InterPro:BTB/POZ_dom	ProteinID:CAN82247	ProteinID:CAN82247.1	ProteinID:CCB46866	ProteinID:CCB46866.1	ncoils:Coil
UniProt:F6H337	EMBL:FN595231	GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0060918	GO:GO:0099402	InterPro:IPR000210
InterPro:IPR027356	EntrezGene:LOC100264499	wikigene:LOC100264499	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF7	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF54695	TIGR:TC66729	UniParc:UPI0002109804	ArrayExpress:VIT_04s0008g06630	EnsemblPlantsGene:VIT_04s0008g06630	EnsemblPlants:VIT_04s0008g06630.t01
unigene:Vvi.5685	RefSeq:XP_002285522	RefSeq:XP_002285522.2	RefSeq:XP_002285523	RefSeq:XP_002285523.1	SEG:seg

Description

No Description!

Coordinates

chr4:-:6608918..6615568

Molecular Weight (calculated)

69459.8 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.333

Length

620 amino acids

Sequence
(BLAST)

001: MKFMKLGSKP DAFQADGNSV RYVSSELATD VIIIVGGVKF YLHKFPLLSK SNRLQKLVVK ASEENSDEIR LVDFPGGPKA FEICAKFCYG MTVTLNAYNV
101: VAARCAAEYL EMTEDVDRGN LIFKIEVFLN SSVFRSWKDS IIVLQTTKSL LPWSEDLKVI GRCIDSIASK TSVDPANISW SYTYNRKLAV PDKIIEDGMK
201: LQERIESVPK DWWVEDICEL EIDLYKRVMI AVKSKGRMDA NVIGEALKTY AVRWLPDSLD ALVSDDHTRR NKSLVETIIC LLPSDKGVGC SCSFLLKLLK
301: VAILVGADDS QREELVKRIS LKLDEASVND LLIRARSPQT TVYDVELVQS IVNRFVLHEK RCQDLDISEK NEKGTSDFIL GHGPLLKVGK LMDGYLAEIA
401: HDPNLTLSSF NDIVRSTPES ARPIHDGLYK AIDIYLKAHQ NLTKAERKKL CGLMDVKKLT MDASMHAAQN DRLPLRVVVQ VLFFEQVRAA AGAQAPNSIP
501: RDTSQAMTNM DEEWEKPAIV RGPESCKSLR RQMNQMKIKD EEFRKNGKLT KKGSKNSRSG VQLLPSRSRR MFDKLWAVGK KHGENRSSET SGSSQSPTSV
601: APGETKSSGS SSRQRRHSIS

Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)

001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S

Arabidopsis Description

NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.