Factsheet for VIT_07s0104g01440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g074630.2.1	Tomato	cytosol	69.73	86.11
KRH31912	Soybean	cytosol	85.1	85.51
KRH71541	Soybean	plastid	85.26	85.4
PGSC0003DMT400029528	Potato	cytosol	68.78	85.27
KRG96392	Soybean	plastid	82.57	82.96
KRH68133	Soybean	cytosol, plastid	82.57	82.83
GSMUA_Achr8P30170_001	Banana	plastid	65.29	73.84
Bra033365.1-P	Field mustard	cytosol	73.38	73.49
CDX89922	Canola	cytosol	73.38	73.49
AT1G03010.1	Thale cress	cytosol	73.69	73.34
CDY18140	Canola	cytosol	73.06	73.17
GSMUA_Achr1P11260_001	Banana	plastid	66.24	72.95
CDY32492	Canola	cytosol	72.27	71.47
Bra032564.1-P	Field mustard	cytosol, plastid	72.11	71.32
CDY37449	Canola	cytosol	51.35	66.67
Bra029894.1-P	Field mustard	plastid	67.19	65.63
CDY52208	Canola	plastid	66.88	65.33
CDX83030	Canola	plastid	54.68	64.49
AT2G47860.3	Thale cress	plastid	66.09	63.37
TraesCS5D01G463700.1	Wheat	plastid	64.34	62.17
Zm00001d047483_P002	Maize	plastid	63.55	61.98
OQU92601	Sorghum	plastid	64.18	61.27
TraesCS7A01G184200.2	Wheat	plastid	64.34	60.78
HORVU1Hr1G055870.1	Barley	plastid	63.87	60.6
Os03t0347700-01	Rice	mitochondrion, plastid	63.23	59.46
TraesCS5B01G461900.4	Wheat	plastid	61.65	59.21
VIT_07s0005g06300.t01	Wine grape	cytosol	46.12	47.24
VIT_08s0056g00610.t01	Wine grape	cytosol	44.53	46.68
VIT_07s0129g00380.t01	Wine grape	cytosol	42.16	41.82
VIT_06s0004g08230.t01	Wine grape	mitochondrion	33.28	36.71
VIT_00s1395g00010.t01	Wine grape	cytosol	26.78	36.19
VIT_10s0003g04490.t01	Wine grape	cytosol	35.34	35.28
VIT_13s0019g04420.t01	Wine grape	cytosol	33.28	33.93
VIT_00s0207g00230.t01	Wine grape	cytosol	33.76	33.54
VIT_00s0665g00050.t01	Wine grape	cytosol	26.62	33.53
VIT_08s0040g01800.t01	Wine grape	cytosol	32.81	33.17
VIT_07s0129g00250.t01	Wine grape	cytosol	32.17	32.27
VIT_03s0038g00270.t01	Wine grape	cytosol	32.96	30.86
VIT_04s0008g06630.t01	Wine grape	cytosol	29.95	30.48
VIT_03s0091g00680.t01	Wine grape	cytosol	29.48	29.81
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	29.32	29.37
VIT_00s0194g00080.t01	Wine grape	cytosol	25.2	26.81
VIT_06s0061g01140.t01	Wine grape	cytosol	24.41	26.55

Protein Annotations

EntrezGene:100251110	wikigene:100251110	Gene3D:3.30.710.10	MapMan:35.1	EMBL:AM445156	InterPro:BTB/POZ_dom
ProteinID:CAN74119	ProteinID:CAN74119.1	ProteinID:CBI32255	ProteinID:CBI32255.3	ncoils:Coil	UniProt:D7TP32
EMBL:FN596005	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150
GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049
GO:GO:0030154	GO:GO:0040007	GO:GO:0046872	InterPro:IPR000210	InterPro:IPR027356	EntrezGene:LOC100251110
wikigene:LOC100251110	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI00015CAC94	ArrayExpress:VIT_07s0104g01440
EnsemblPlantsGene:VIT_07s0104g01440	EnsemblPlants:VIT_07s0104g01440.t01	RefSeq:XP_002267241	RefSeq:XP_002267241.2	RefSeq:XP_002267273	RefSeq:XP_002267273.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:2440897..2445249

Molecular Weight (calculated)

70484.7 Da

IEP (calculated)

9.122

GRAVY (calculated)

-0.267

Length

631 amino acids

Sequence
(BLAST)

001: MGVVTVGELK PSISGKRSFR PSSSTRHATE WPISDVSSDL TIEVGASSFA LHKFPLVSRS GRIRKLLLEA KDSKVSRIAI PSVPGGPEAF ELAAKFCYGV
101: NIEITLSNVA MLRCVAHFLE MTEEFAEKNL ETRTEGYLKE TVFPNISSSI SVLHQCETLL PIPEEVNLVS RIITAIANNA CKEQLTSGLS KLDHNFPSKP
201: IPTVEPETPS DWWGKSLTVL NLDFFQRVLS AVKSKGLKQD LISKILINYA HNSLQGLAVR DPQLVKGSFL DLELQKKQRV IVEAIVSLLP TQSRKSSVPM
301: AFLSSLLKTA ISASASTACR SDLERRIGLQ LDQAILEDIL IPANSHGNNH GPIYDTDSIL RIFSIFLNLD EDDDEDNHLR DESEMVYDFD SPGSPKQSSI
401: IKVSKLLDNY LAEVALDSNL TPSKFIALSE LLPDHARIVN DGLYRAADIF LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMNG GHNQFFFGSV NGQFPQRSSS GAGSGAISPR DNYASVRREN RELKLEVARM RMRLTDLEKD HVSMKQELVR SHPANKIFKS FTKKLCKLNT
601: LFRIRDIKPI GGKANSETRF LFPKRRRHSV S

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.