Factsheet for Bra032564.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
plasma membrane 1
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32492	Canola	cytosol	99.69	99.69
Bra033365.1-P	Field mustard	cytosol	91.85	93.02
AT1G03010.1	Thale cress	cytosol	88.56	89.12
VIT_07s0104g01440.t01	Wine grape	plastid	71.32	72.11
Solyc09g074630.2.1	Tomato	cytosol	57.37	71.62
PGSC0003DMT400029528	Potato	cytosol	57.05	71.51
KRH71541	Soybean	plastid	70.06	70.95
KRH31912	Soybean	cytosol	69.59	70.7
KRH68133	Soybean	cytosol, plastid	69.59	70.59
KRG96392	Soybean	plastid	68.97	70.06
GSMUA_Achr8P30170_001	Banana	plastid	56.27	64.34
GSMUA_Achr1P11260_001	Banana	plastid	56.9	63.35
Bra029894.1-P	Field mustard	plastid	60.34	59.6
TraesCS5D01G463700.1	Wheat	plastid	58.31	56.97
HORVU1Hr1G055870.1	Barley	plastid	58.46	56.09
TraesCS7A01G184200.2	Wheat	plastid	58.62	55.99
Zm00001d047483_P002	Maize	plastid	56.27	55.49
OQU92601	Sorghum	plastid	57.05	55.07
Os03t0347700-01	Rice	mitochondrion, plastid	57.84	54.99
TraesCS5B01G461900.4	Wheat	plastid	56.27	54.64
Bra037460.1-P	Field mustard	cytosol	41.69	42.9
Bra001349.1-P	Field mustard	plastid	38.71	42.37
Bra012158.1-P	Field mustard	cytosol	38.4	40.77
Bra032401.1-P	Field mustard	cytosol	38.71	40.69
Bra031830.1-P	Field mustard	cytosol	32.76	37.86
Bra036043.1-P	Field mustard	cytosol	30.88	35.95
Bra018309.1-P	Field mustard	cytosol, plastid	33.07	35.7
Bra022805.1-P	Field mustard	cytosol	31.82	35.3
Bra005737.1-P	Field mustard	cytosol	30.25	32.82
Bra032187.1-P	Field mustard	cytosol	24.45	32.57
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.76	31.86
Bra012166.1-P	Field mustard	cytosol	27.9	31.62
Bra039820.1-P	Field mustard	cytosol	30.72	31.26
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.13	31.01
Bra037846.1-P	Field mustard	cytosol	25.08	30.42
Bra008815.1-P	Field mustard	cytosol	28.68	30.15
Bra036858.1-P	Field mustard	cytosol	27.12	30.14
Bra010603.1-P	Field mustard	cytosol	27.12	30.09
Bra017837.1-P	Field mustard	cytosol	27.12	29.93
Bra012082.1-P	Field mustard	cytosol	31.19	29.75
Bra011301.1-P	Field mustard	cytosol	26.65	29.46
Bra024285.1-P	Field mustard	cytosol	32.92	28.97
Bra023423.1-P	Field mustard	cytosol	24.92	28.8
Bra025208.1-P	Field mustard	cytosol	25.86	28.75
Bra009047.1-P	Field mustard	cytosol	28.37	28.73
Bra037773.1-P	Field mustard	cytosol	32.76	28.36
Bra004064.1-P	Field mustard	cytosol	27.74	28.14
Bra025440.1-P	Field mustard	cytosol	25.24	28.1
Bra037606.1-P	Field mustard	cytosol	27.43	27.3
Bra024915.1-P	Field mustard	cytosol	23.04	26.2
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:Bra032564.1	EnsemblPlants:Bra032564.1-P	EnsemblPlantsGene:Bra032564	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf
ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF30	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SUPFAM:SSF54695	UniParc:UPI0002543015	UniProt:M4EUT2	MapMan:35.1	:

Description

AT1G03010 (E=3e-311) | phototropic-responsive NPH3 family protein

Coordinates

chrA09:-:36631446..36634838

Molecular Weight (calculated)

71556.1 Da

IEP (calculated)

9.020

GRAVY (calculated)

-0.245

Length

638 amino acids

Sequence
(BLAST)

001: MGLSTVGEVK PTFTGKRGFR LNSSIRHASE WPISEVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLTDS KTFNICLSSV PGGSEAFELA AKFCYGINIE
101: INLLNVAKLR CASHYLEMAE DFSEDNLAIK TEHYFKETVL PSISNSILVL HHCEALTPVS EDLNLVNRLV IAIANNACKE QLTSGLLKLD YTFSGANMEP
201: ETPLDWWGKS VAVLNLEFFQ RVVSAVRSKG LRQDVISKIL ISYTNKSLQG LIVRDTKLDK ERVIDSEAKK KQRMIVETIV RLLPTQGRKS SVPIAFLSSL
301: LKMVIATSSS SASISSCRSD LERRIGLQLD QAILEDVLIP TSPNGVNNTM YDIDSILRIF SILLNLDEED DDEEEDRHHR NRFGDETEMI FDFDSPGSPK
401: QSSILKVSKL MDNYLAEIAL DTNLTTSKFI ALAELLPDHA RIISDGLYRA VDIYLKVHPN IKDSERYRLC KTIDSQKLSQ EACSHAAQNE RLPVQMAVQV
501: LYFEQIRLRN AMSSSISPTQ FLFSGNCHQF PQRGGSGAGS GAISPRDNYA SVRRENRELK LEVARMRMRL TDLEKDHISI RQELVKTNPG TKLFKSFAKK
601: ISKLNSLFSF ASLKPSLKGK ASTESRFLFQ RKRRHSVS

Best Arabidopsis Sequence Match ( AT1G03010.1 )
(BLAST)

001: MGLVTVGELK PAFTGKRGFR LNSTIRHASE WPISDVSSDL TVQVGSSSFC LHKFPLVSRS GKIRKLLADP KISNVCLSNA PGGSEAFELA AKFCYGINIE
101: INLLNIAKLR CASHYLEMTE DFSEENLASK TEHFLKETIF PSILNSIIVL HHCETLIPVS EDLNLVNRLI IAVANNACKE QLTSGLLKLD YSFSGTNIEP
201: QTPLDWWGKS LAVLNLDFFQ RVISAVKSKG LIQDVISKIL ISYTNKSLQG LIVRDPKLEK ERVLDSEGKK KQRLIVETIV RLLPTQGRRS SVPMAFLSSL
301: LKMVIATSSS ASTGSCRSDL ERRIGLQLDQ AILEDVLIPI NLNGTNNTMY DIDSILRIFS IFLNLDEDDE EEEHHHLQFR DETEMIYDFD SPGSPKQSSI
401: LKVSKLMDNY LAEIAMDPNL TTSKFIALAE LLPDHARIIS DGLYRAVDIY LKVHPNIKDS ERYRLCKTID SQKLSQEACS HAAQNERLPV QMAVQVLYFE
501: QIRLRNAMSS SIGPTQFLFN SNCHQFPQRS GSGAGSGAIS PRDNYASVRR ENRELKLEVA RMRMRLTDLE KDHISIKQEL VKSNPGTKLF KSFAKKISKL
601: NSLFSFSSLK PSLSGKASSE SRFLFQRKRR HSVS

Arabidopsis Description

BTB/POZ domain-containing protein At1g03010 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA69]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.