Factsheet for Bra008815.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69627	Canola	cytosol	97.2	97.2
AT5G13600.1	Thale cress	cytosol	79.08	81.22
Bra023423.1-P	Field mustard	cytosol	68.53	75.36
VIT_13s0019g04420.t01	Wine grape	cytosol	55.02	53.96
GSMUA_AchrUn_...	Banana	cytosol	36.9	52.71
Bra005737.1-P	Field mustard	cytosol	49.42	51.02
KRH34860	Soybean	cytosol	50.41	49.51
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	41.19	49.51
KRG91918	Soybean	cytosol	50.25	49.43
GSMUA_Achr2P02890_001	Banana	cytosol	44.81	48.23
Zm00001d043271_P001	Maize	cytosol	48.11	45.13
Os01t0780600-01	Rice	plasma membrane	48.93	45.07
HORVU3Hr1G076740.1	Barley	cytosol	47.61	44.95
TraesCS3B01G349200.1	Wheat	cytosol	47.78	44.82
Os04t0636500-01	Rice	plasma membrane	47.45	44.72
EES03716	Sorghum	cytosol	47.94	44.7
TraesCS3A01G317300.1	Wheat	cytosol	47.45	44.38
TraesCS3D01G314000.1	Wheat	cytosol	47.45	44.17
Bra010771.1-P	Field mustard	cytosol, mitochondrion, nucleus	47.45	43.9
Zm00001d002146_P001	Maize	cytosol	44.81	43.87
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	47.61	43.72
EES11510	Sorghum	cytosol	44.65	42.61
TraesCS2B01G557300.2	Wheat	cytosol	44.15	41.42
TraesCS2D01G529600.1	Wheat	cytosol	44.15	41.23
TraesCS2A01G526900.1	Wheat	cytosol	44.15	41.1
Bra025440.1-P	Field mustard	cytosol	38.22	40.49
Bra036858.1-P	Field mustard	cytosol	35.26	37.28
Bra032187.1-P	Field mustard	cytosol	28.34	35.91
Bra012082.1-P	Field mustard	cytosol	38.72	35.13
Bra037606.1-P	Field mustard	cytosol	37.07	35.1
Bra012166.1-P	Field mustard	cytosol	31.14	33.57
Bra037460.1-P	Field mustard	cytosol	33.11	32.42
Bra001349.1-P	Field mustard	plastid	30.97	32.25
Bra037846.1-P	Field mustard	cytosol	27.84	32.13
Bra012158.1-P	Field mustard	cytosol	31.8	32.11
Bra017837.1-P	Field mustard	cytosol	30.48	32.01
Bra010603.1-P	Field mustard	cytosol	30.31	32.0
Bra018309.1-P	Field mustard	cytosol, plastid	30.81	31.64
Bra024285.1-P	Field mustard	cytosol	36.74	30.76
Bra025208.1-P	Field mustard	cytosol	29.0	30.66
Bra022805.1-P	Field mustard	cytosol	29.0	30.61
Bra031830.1-P	Field mustard	cytosol	27.68	30.43
Bra004064.1-P	Field mustard	cytosol	31.47	30.37
Bra011301.1-P	Field mustard	cytosol	28.5	29.98
Bra029894.1-P	Field mustard	plastid	31.63	29.72
Bra037773.1-P	Field mustard	cytosol	36.08	29.72
Bra032401.1-P	Field mustard	cytosol	29.65	29.65
Bra039820.1-P	Field mustard	cytosol	30.31	29.35
Bra033365.1-P	Field mustard	cytosol	30.15	29.05
Bra032564.1-P	Field mustard	cytosol, plastid	30.15	28.68
Bra024915.1-P	Field mustard	cytosol	26.03	28.16
Bra036043.1-P	Field mustard	cytosol	25.37	28.1
Bra009047.1-P	Field mustard	cytosol	29.0	27.94
Bra010770.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra008815	EnsemblPlants:Bra008815.1	EnsemblPlants:Bra008815.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:M4CX68	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002543789
SEG:seg	:	:	:	:	:

Description

AT5G13600 (E=2e-257) | phototropic-responsive NPH3 family protein

Coordinates

chrA10:-:13959781..13961966

Molecular Weight (calculated)

68089.2 Da

IEP (calculated)

5.526

GRAVY (calculated)

-0.273

Length

607 amino acids

Sequence
(BLAST)

001: MACLKLGSKS EVFHLSGHTW VCSTGLKPDV VIQVQDQTFH LHKFPLLSRS GYLEALFSKA SETASHHAQL HDIPGGPDTF LHVANFCYGV RIEVTAENVV
101: SLRCAAEYLQ MSENYGNANL IYLTESFLND DVCTNWEDSI RALESCEKKL LPIAEELGIV SRCISSLAVK ASYAEDKSLF NWPISAPETT TTTLWNGIQT
201: KSTSGSNWWF NDVSSFLDFP IYKRFIQTIA SRGVKADVVA ASVTHYAKRN LPLLGCSRHC GSSSSDEGTN YGDDIYYSHD DQRSLLEEIV ELLPSEKRVA
301: STRFLLRLLR TSMVLHASAV TQDSLERKIG VQLDEAGLED LLIPNMGYSA ETLYDIDSVQ RILDHFMLTF DSSSRCYNNV EEKQLMGDSH PLRAMTKVAS
401: LIDGYLAEVG SDENLKLLKF QALGALIPED VRPMDDGIYR AIDIYIKAHP WLTEYEREQL CLLMNCQKLS LEACTHAAQN ERLPVRVIVQ VLFFEQMRLR
501: TSISELVMDT DSSNEDTNGM NPALEGGSKI KGNAKMGIKE MKERVYELEK ECTSMKQDLY KLVKPKEERN FFSKIFGLKS KTKTSPCGGK GKGGEEDALL
601: MIRETKN

Best Arabidopsis Sequence Match ( AT5G13600.1 )
(BLAST)

001: MASLKLGSKS EVFHLSGHTW LCKTGLKPDV MIQVVDESFH LHKFPLLSRS GYLETLFSKA SETTCVAQLH DIPGGPETFL LVAKFCYGVR IEVTPENAVS
101: LRCAAEYLQM SENYGDANLI YLTESFLNDH VFVNWEDSIK ALEKSCEPKV LPLAEELHIV SRCIGSLAMK ACAEDNTSFF NWPISLPEGT TTTTIYWNGI
201: QTKATSENWW FNDVSSFLDL PMYKRFIKTV ESRGVNAGII AASVTHYAKR NLPLLGCSRK SGSPSEEGTN YGDDMYYSHE EQRSLLEEIV ELLPGKKCVT
301: STKFLLRLLR TSMVLHASQV TQETLEKRIG MQLDEAALED LLIPNMKYSG ETLYDTDSVQ RILDHFMLTF DSSIVEEKQM MGDSHPLKSI TKVASLIDGY
401: LAEVASDENL KLSKFQALGA LIPEDVRPMD DGIYRAIDIY IKAHPWLTES EREQLCLLMN CQKLSLEACT HAAQNERLPL RVIVQVLFFE QMRLRTSIAG
501: WLFGSEENND TSGALEGNKN TNANMVMHGM RERVFELEKE CMSMKQDLDK LVKTKEGRNF FSKIFGSRSK TKTSPCGKGG EDALVIPETK N

Arabidopsis Description

Putative BTB/POZ domain-containing protein At5g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.