CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008815.1-P	Field mustard	cytosol	97.2	97.2
CDY09812	Canola	cytosol	95.55	95.39
CDX85639	Canola	cytosol	76.28	80.94
AT5G13600.1	Thale cress	cytosol	78.75	80.88
VIT_13s0019g04420.t01	Wine grape	cytosol	54.86	53.8
CDY10395	Canola	cytosol	47.45	53.04
GSMUA_AchrUn_...	Banana	cytosol	36.9	52.71
CDX70320	Canola	cytosol	48.93	51.92
CDX80858	Canola	cytosol	49.59	51.19
CDY72506	Canola	cytosol	10.71	51.18
CDY11245	Canola	cytosol	49.59	50.33
KRH34860	Soybean	cytosol	50.41	49.51
KRG91918	Soybean	cytosol	50.25	49.43
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	40.69	48.91
GSMUA_Achr2P02890_001	Banana	cytosol	44.15	47.52
Os01t0780600-01	Rice	plasma membrane	48.6	44.76
Zm00001d043271_P001	Maize	cytosol	47.61	44.67
CDX90249	Canola	cytosol, mitochondrion, nucleus	46.29	44.53
HORVU3Hr1G076740.1	Barley	cytosol	47.12	44.48
Os04t0636500-01	Rice	plasma membrane	47.12	44.41
TraesCS3B01G349200.1	Wheat	cytosol	47.28	44.36
EES03716	Sorghum	cytosol	47.45	44.24
CDY09586	Canola	cytosol	47.61	44.05
TraesCS3A01G317300.1	Wheat	cytosol	46.95	43.91
TraesCS3D01G314000.1	Wheat	cytosol	46.95	43.71
CDY02293	Canola	cytosol, mitochondrion, nucleus	47.45	43.7
Zm00001d002146_P001	Maize	cytosol	44.32	43.39
CDY27653	Canola	cytosol	43.99	43.2
EES11510	Sorghum	cytosol	44.32	42.3
CDX99692	Canola	cytosol, mitochondrion, nucleus	44.48	41.86
TraesCS2B01G557300.2	Wheat	cytosol	43.66	40.96
TraesCS2D01G529600.1	Wheat	cytosol	43.66	40.77
TraesCS2A01G526900.1	Wheat	cytosol	43.66	40.64
CDY45241	Canola	cytosol	37.4	37.96
CDX77951	Canola	cytosol	34.1	37.77
CDX73781	Canola	cytosol	33.77	37.61
CDY30765	Canola	cytosol	39.21	37.54
CDY72267	Canola	cytosol	30.97	37.15
CDY72257	Canola	cytosol	30.81	36.96
CDY38923	Canola	cytosol	28.17	35.92
CDY68489	Canola	cytosol, plastid	26.19	35.41
CDX89539	Canola	cytosol	27.84	35.28
CDY69095	Canola	cytosol	30.81	33.33
CDY12846	Canola	cytosol	30.64	32.92
CDY37857	Canola	cytosol	32.45	32.83
CDY29723	Canola	cytosol	37.56	32.71
CDX81314	Canola	cytosol	28.34	32.7
CDX85365	Canola	cytosol	33.28	32.58
CDX86278	Canola	cytosol	33.28	32.58
CDX73937	Canola	plastid	31.3	32.53
CDY00659	Canola	plastid	31.3	32.48
CDY18660	Canola	cytosol	28.01	32.2
CDY10743	Canola	cytosol	30.81	32.19
CDY57436	Canola	cytosol	31.8	32.01
CDY02075	Canola	cytosol	30.48	31.9
CDY12841	Canola	cytosol	31.63	31.84
CDX72639	Canola	cytosol	30.31	31.83
CDY29566	Canola	cytosol	30.31	31.83
CDY44035	Canola	cytosol	30.15	31.83
CDY20341	Canola	cytosol	37.07	31.69
CDY22422	Canola	cytosol	29.65	31.3
CDX84827	Canola	cytosol	29.0	31.15
CDY23992	Canola	cytosol	29.0	31.15
CDX83620	Canola	cytosol	28.01	31.08
CDX68790	Canola	cytosol	29.0	30.77
CDX84515	Canola	cytosol	36.74	30.72
CDX81462	Canola	cytosol	30.31	30.51
CDY13635	Canola	cytosol	28.67	30.31
CDY09561	Canola	cytosol	30.15	30.3
CDY18715	Canola	cytosol	36.08	30.25
CDY52208	Canola	plastid	32.13	30.19
CDY37223	Canola	cytosol	29.98	30.18
CDY57361	Canola	cytosol	24.71	30.06
CDX75198	Canola	cytosol	28.5	29.98
CDY30615	Canola	cytosol	24.55	29.86
CDY02305	Canola	cytosol	29.82	29.82
CDX89922	Canola	cytosol	30.81	29.68
CDX81221	Canola	cytosol	35.58	29.59
CDY18140	Canola	cytosol	30.64	29.52
CDY32492	Canola	cytosol	30.97	29.47
CDY50369	Canola	cytosol	24.88	29.43
CDY37449	Canola	cytosol	23.23	29.01
CDX77798	Canola	cytosol	26.19	28.34
CDY17704	Canola	cytosol	26.19	28.34
CDX96986	Canola	cytosol	29.16	28.27
CDX69851	Canola	cytosol	29.32	28.25
CDX83030	Canola	plastid	23.72	26.92
CDY12056	Canola	plasma membrane	46.29	17.41

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX69627	ProteinID:CDX69627	ProteinID:CDX69627.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00135645001	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniPathway:UPA00143
UniParc:UPI0004EE3E80	SEG:seg	:	:	:	:

Description

BnaA10g19760D

Coordinates

chrLK031790:-:1082973..1085255

Molecular Weight (calculated)

68071.2 Da

IEP (calculated)

5.647

GRAVY (calculated)

-0.285

Length

607 amino acids

Sequence
(BLAST)

001: MACLKLGSKS EVFHLSGHTW VCSTGLKPDV VIQVQDQTFH LHKFPLLSRS GYLEALFSKA SETASHHAQL HDIPGGPDTF LHVANFCYGV RIEVTAENVV
101: SLRCAAEYLQ MSENYGNANL IYLTESFLND DVCTNWEDSI RALESCEKKL LPIAEELGIV SRCVSSLAIK ASYAEDKSLF NWPISAPETT TTTLWNGIQT
201: KSTSGGNWWF NDVSSFLDFP VYRRFIQTVA SRGVKADVIA ASVTHYAKRN LPLLGCSRHG GSSSSDEGTN YGDDVYYSHD DQRSLLEEIV ELLPSEKRVA
301: STRFLLRLLR TSMVLHASAV TQDSLERKIG VQLDEAGLED LLIPNMGYSA ETLYDIDSVQ RILDHFMLTF DSSSRCYSNV EEKQLMGDSH PLRAMTKVAS
401: LIDGYLAEVG SDENLKLLKF QALGALIPED VRPMDDGIYR AIDIYIKAHP WLTEYEREKL CLLMNCQKLS LEACTHAAQN ERLPVRVIVQ VLFFEQMRLR
501: TSISELVMDT DSNNEETSGK NLELEGGSKI KGNAKMGIKE MKERVYELEK ECTSMKQDLY KLVKPKEERN FFSKIFGLKS KTKTSPCGGK GKGGEEDALL
601: MIRETKN

Best Arabidopsis Sequence Match ( AT5G13600.1 )
(BLAST)

001: MASLKLGSKS EVFHLSGHTW LCKTGLKPDV MIQVVDESFH LHKFPLLSRS GYLETLFSKA SETTCVAQLH DIPGGPETFL LVAKFCYGVR IEVTPENAVS
101: LRCAAEYLQM SENYGDANLI YLTESFLNDH VFVNWEDSIK ALEKSCEPKV LPLAEELHIV SRCIGSLAMK ACAEDNTSFF NWPISLPEGT TTTTIYWNGI
201: QTKATSENWW FNDVSSFLDL PMYKRFIKTV ESRGVNAGII AASVTHYAKR NLPLLGCSRK SGSPSEEGTN YGDDMYYSHE EQRSLLEEIV ELLPGKKCVT
301: STKFLLRLLR TSMVLHASQV TQETLEKRIG MQLDEAALED LLIPNMKYSG ETLYDTDSVQ RILDHFMLTF DSSIVEEKQM MGDSHPLKSI TKVASLIDGY
401: LAEVASDENL KLSKFQALGA LIPEDVRPMD DGIYRAIDIY IKAHPWLTES EREQLCLLMN CQKLSLEACT HAAQNERLPL RVIVQVLFFE QMRLRTSIAG
501: WLFGSEENND TSGALEGNKN TNANMVMHGM RERVFELEKE CMSMKQDLDK LVKTKEGRNF FSKIFGSRSK TKTSPCGKGG EDALVIPETK N

Arabidopsis Description

Putative BTB/POZ domain-containing protein At5g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.