CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72506	Canola	cytosol	22.03	99.21
CDY10395	Canola	cytosol	91.96	96.87
AT5G03250.1	Thale cress	cytosol	88.81	85.81
CDX80858	Canola	cytosol	86.71	84.35
CDY11245	Canola	cytosol	86.19	82.44
KRH21111	Soybean	cytosol	65.03	60.88
KRH32482	Soybean	cytosol	62.24	60.44
KRH19874	Soybean	cytosol	61.71	59.93
VIT_08s0040g01800.t01	Wine grape	cytosol	63.64	58.33
Solyc09g007820.1.1	Tomato	cytosol	60.84	58.29
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	61.01	57.21
PGSC0003DMT400093531	Potato	cytosol	52.97	56.32
GSMUA_AchrUn_...	Banana	cytosol	40.38	54.35
GSMUA_Achr2P02890_001	Banana	cytosol	52.62	53.37
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	46.85	53.07
CDX85639	Canola	cytosol	51.05	51.05
Zm00001d043271_P001	Maize	cytosol	55.42	49.0
CDX69627	Canola	cytosol	51.92	48.93
CDY09812	Canola	cytosol	51.22	48.19
Os01t0780600-01	Rice	plasma membrane	55.42	48.1
TraesCS3B01G349200.1	Wheat	cytosol	54.2	47.91
HORVU3Hr1G076740.1	Barley	cytosol	53.85	47.9
CDX90249	Canola	cytosol, mitochondrion, nucleus	52.8	47.86
EES03716	Sorghum	cytosol	54.2	47.62
TraesCS3A01G317300.1	Wheat	cytosol	53.85	47.46
Zm00001d002146_P001	Maize	cytosol	51.22	47.26
TraesCS3D01G314000.1	Wheat	cytosol	53.67	47.09
Os04t0636500-01	Rice	plasma membrane	52.45	46.58
CDY09586	Canola	cytosol	53.15	46.34
CDY02293	Canola	cytosol, mitochondrion, nucleus	53.32	46.28
CDY27653	Canola	cytosol	49.13	45.47
EES11510	Sorghum	cytosol	50.17	45.13
TraesCS2B01G557300.2	Wheat	cytosol	50.0	44.2
CDX99692	Canola	cytosol, mitochondrion, nucleus	49.83	44.19
TraesCS2A01G526900.1	Wheat	cytosol	50.0	43.87
TraesCS2D01G529600.1	Wheat	cytosol	49.65	43.69
CDX77951	Canola	cytosol	36.89	38.5
CDY45241	Canola	cytosol	40.21	38.46
CDY72267	Canola	cytosol	33.22	37.55
CDY72257	Canola	cytosol	33.04	37.35
CDX73781	Canola	cytosol	35.49	37.25
CDY30765	Canola	cytosol	41.26	37.22
CDX89539	Canola	cytosol	30.59	36.53
CDY38923	Canola	cytosol	30.24	36.34
CDY68489	Canola	cytosol, plastid	27.8	35.41
CDX81314	Canola	cytosol	32.17	34.98
CDX83620	Canola	cytosol	33.39	34.92
CDY69095	Canola	cytosol	33.92	34.58
CDY18660	Canola	cytosol	31.82	34.47
CDY13635	Canola	cytosol	34.44	34.32
CDY12846	Canola	cytosol	33.57	33.98
CDX85365	Canola	cytosol	36.19	33.39
CDY29723	Canola	cytosol	40.56	33.29
CDX86278	Canola	cytosol	36.01	33.23
CDX68790	Canola	cytosol	32.87	32.87
CDY20341	Canola	cytosol	40.73	32.82
CDX75198	Canola	cytosol	33.04	32.76
CDY57436	Canola	cytosol	34.44	32.67
CDY29566	Canola	cytosol	32.87	32.53
CDX72639	Canola	cytosol	32.69	32.35
CDY44035	Canola	cytosol	32.52	32.35
CDY22422	Canola	cytosol	32.52	32.35
CDY12841	Canola	cytosol	33.74	32.01
CDY37857	Canola	cytosol	33.57	32.0
CDY30615	Canola	cytosol	27.8	31.86
CDX73937	Canola	plastid	32.52	31.85
CDY00659	Canola	plastid	32.34	31.62
CDX81462	Canola	cytosol	33.22	31.51
CDY10743	Canola	cytosol	31.99	31.5
CDY57361	Canola	cytosol	27.45	31.46
CDY02075	Canola	cytosol	31.47	31.03
CDX84827	Canola	cytosol	30.59	30.97
CDY37223	Canola	cytosol	32.52	30.85
CDY23992	Canola	cytosol	30.42	30.8
CDX84515	Canola	cytosol	38.81	30.58
CDY52208	Canola	plastid	34.44	30.5
CDY18715	Canola	cytosol	38.46	30.39
CDX89922	Canola	cytosol	33.39	30.32
CDY18140	Canola	cytosol	33.39	30.32
CDY50369	Canola	cytosol	26.92	30.02
CDX81221	Canola	cytosol	38.29	30.0
CDY32492	Canola	cytosol	33.39	29.94
CDY37449	Canola	cytosol	25.35	29.84
CDY02305	Canola	cytosol	31.47	29.65
CDX69851	Canola	cytosol	32.52	29.52
CDX96986	Canola	cytosol	32.17	29.39
CDY09561	Canola	cytosol	30.94	29.3
CDX77798	Canola	cytosol	27.97	28.52
CDY17704	Canola	cytosol	27.97	28.52
CDX83030	Canola	plastid	25.35	27.1
CDY12056	Canola	plasma membrane	52.1	18.46

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDX70320	ProteinID:CDX70320	ProteinID:CDX70320.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00136473001	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF46	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE9AE4
SEG:seg	:	:	:	:	:

Description

BnaA10g26690D

Coordinates

chrLK031790:-:4100643..4108693

Molecular Weight (calculated)

64167.0 Da

IEP (calculated)

4.890

GRAVY (calculated)

-0.260

Length

572 amino acids

Sequence
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES SNDDGSACVL TLDEIPGGGK TFELITKFCY GVKIELTALN
101: VVALRCAAEY LDMTDSYGER NLVGTTETFL NEVFGNWTDS IKALQTCEEV TDHAEDLNII SRCVDSLASK ACADPSLLGK KKNEDETHLW NGISMLQPNG
201: EDWWFDDASL LILPLFKRLI TAIKSRGMKP ENIAMAVMYY TRKHIPLMNR DDEQATSPSE AEQKTTLEEI VELLPSKKGV NPTKFLLRLL QTAMVLHASQ
301: SSREDLETRI GNQLDQAALV DLLIPNMGYS ETLYDVECVL RMIEQFVSST EQAGIVPSPS ITEGDLGKDG DDLLTPTTLV ATLVDGYLAE VAPDVNLKLT
401: KFEAIAAAIP DYARPLDDGV YHAIDVYLKA HAWITDSERE QICRLMNCQK LSLEASTHAA QNERLPLRVI VQVLFFEQLR LRTSISGWFF VSENLDNPEL
501: LHQSGGNGGL LKPRGENVRE KVCELEKECM NMKEELQKLV RSKRSWKNFT RKLNFKKKSE CFNPKDQAKP AV

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.