CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY37857	Canola	cytosol	98.66	73.83
CDY12841	Canola	cytosol	93.32	69.49
CDY57436	Canola	cytosol	93.1	69.32
AT5G67385.1	Thale cress	cytosol	92.65	68.87
CDY30615	Canola	cytosol	62.81	56.51
CDY57361	Canola	cytosol	62.58	56.31
Solyc02g092560.2.1	Tomato	cytosol, nucleus	71.27	53.69
KRH77099	Soybean	cytosol	73.72	53.56
VIT_07s0129g00380.t01	Wine grape	cytosol	75.72	53.46
KRH28386	Soybean	cytosol	74.16	52.86
KRH58066	Soybean	cytosol	69.27	52.71
KRH04469	Soybean	cytosol	68.37	52.66
GSMUA_Achr7P26300_001	Banana	cytosol	69.04	52.36
PGSC0003DMT400033866	Potato	cytosol	64.81	48.42
Solyc02g064720.2.1	Tomato	cytosol	64.81	48.1
TraesCS4B01G255500.1	Wheat	cytosol	60.36	44.79
Zm00001d028056_P001	Maize	cytosol	59.24	44.56
TraesCS4A01G049300.1	Wheat	cytosol	60.13	44.41
TraesCS4D01G255500.1	Wheat	cytosol	60.36	44.28
HORVU4Hr1G069480.3	Barley	cytosol	59.91	43.88
KXG39906	Sorghum	cytosol	58.8	42.93
Os03t0206700-00	Rice	plasma membrane	58.35	41.85
CDY37449	Canola	cytosol	40.09	37.04
CDY72267	Canola	cytosol	38.53	34.19
CDY72257	Canola	cytosol	38.53	34.19
CDX86278	Canola	cytosol	44.99	32.58
CDX85365	Canola	cytosol	44.77	32.42
CDX84827	Canola	cytosol	40.53	32.21
CDX89539	Canola	cytosol	33.63	31.52
CDY10743	Canola	cytosol	40.76	31.5
CDY23992	Canola	cytosol	39.42	31.33
CDX89922	Canola	cytosol	43.88	31.27
CDY02075	Canola	cytosol	40.31	31.21
CDY52208	Canola	plastid	44.77	31.11
CDY38923	Canola	cytosol	32.96	31.09
CDY18140	Canola	cytosol	43.43	30.95
CDY32492	Canola	cytosol	43.43	30.56
CDY09561	Canola	cytosol	40.09	29.8
CDX73937	Canola	plastid	38.31	29.45
CDY00659	Canola	plastid	38.31	29.4
CDY02305	Canola	cytosol	39.42	29.16
CDY10395	Canola	cytosol	34.3	28.36
CDX85639	Canola	cytosol	36.08	28.32
CDY12846	Canola	cytosol	35.63	28.32
CDX73781	Canola	cytosol	34.08	28.07
CDY69095	Canola	cytosol	34.74	27.81
CDX70320	Canola	cytosol	35.41	27.8
CDY45241	Canola	cytosol	36.97	27.76
CDX83030	Canola	plastid	32.74	27.48
CDX83620	Canola	cytosol	33.41	27.42
CDX80858	Canola	cytosol	35.86	27.38
CDX77951	Canola	cytosol	33.18	27.19
CDX68790	Canola	cytosol	34.52	27.1
CDX81314	Canola	cytosol	31.63	27.0
CDY11245	Canola	cytosol	35.63	26.76
CDY30765	Canola	cytosol	37.64	26.66
CDY44035	Canola	cytosol	34.08	26.61
CDX72639	Canola	cytosol	34.08	26.47
CDY37223	Canola	cytosol	35.41	26.37
CDX81462	Canola	cytosol	35.41	26.37
CDX69627	Canola	cytosol	35.41	26.19
CDX75198	Canola	cytosol	33.63	26.17
CDY09812	Canola	cytosol	35.41	26.15
CDY18660	Canola	cytosol	30.73	26.14
CDY29566	Canola	cytosol	33.63	26.12
CDX90249	Canola	cytosol, mitochondrion, nucleus	36.53	25.99
CDY13635	Canola	cytosol	33.18	25.96
CDY27653	Canola	cytosol	35.63	25.89
CDY22422	Canola	cytosol	32.96	25.74
CDY09586	Canola	cytosol	37.42	25.61
CDY02293	Canola	cytosol, mitochondrion, nucleus	37.19	25.34
CDY18715	Canola	cytosol	40.53	25.14
CDX84515	Canola	cytosol	40.53	25.07
CDX81221	Canola	cytosol	40.76	25.07
CDX99692	Canola	cytosol, mitochondrion, nucleus	35.63	24.81
CDX69851	Canola	cytosol	34.52	24.6
CDY50369	Canola	cytosol	27.84	24.37
CDX96986	Canola	cytosol	32.74	23.48
CDX77798	Canola	cytosol	28.06	22.46
CDY17704	Canola	cytosol	28.06	22.46
CDY29723	Canola	cytosol	33.18	21.38
CDY20341	Canola	cytosol	32.96	20.85
CDY12056	Canola	plasma membrane	36.97	10.29
CDY72506	Canola	cytosol	2.45	8.66

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078JNY6	InterPro:BTB/POZ_dom	EnsemblPlants:CDY68489	ProteinID:CDY68489
ProteinID:CDY68489.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00074806001	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE8BA8

Description

BnaCnng59210DBnaCnng59210D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNY6]

Coordinates

chrLK037415:+:110..2695

Molecular Weight (calculated)

50327.8 Da

IEP (calculated)

5.162

GRAVY (calculated)

-0.102

Length

449 amino acids

Sequence
(BLAST)

001: MSAKKKDLLS SAMKRTSVWI SSQEVSSDVT VHVGEASFSL HKFPLLSKCG LFKKLVSEST NDSDATVIKI PDIPGGSEAF ELTTKFCYGI NFDMSTENIA
101: MLRCASEYLE MTEEHSVENL VSRSEAYLNE VALKSLSSAI TVLHKSEELL PIAERVKLVS RCIDAIAYMT CQESQFCSPT SNNSNSEVVS KQPVVDWWAE
201: DLTVLNIDSF QRVLIAMMAR GFKQYGLGPV LMLYAQKSLR GLEIFGKGTK EIEPKQEHEK RVILETIVSL LPRERNAMSV SFLSMLLRAA IYLETTVACR
301: LDLEKRMRLQ LPQAVLDDLL IPSYSFTGEH SLFDTDTVQR ILMNYLEFEV EGVRLSNNGV DLAGDMERVG KLMETYLAEI ASDRNVSLQK FTGLAELIPE
401: QSRVTEDGMY RAVDIYLKAH PNMSDVERKK VCSLMDCQKL SREACAHAA

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.