Factsheet for TraesCS4A01G049300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G255500.1	Wheat	cytosol	97.37	96.73
TraesCS4B01G255500.1	Wheat	cytosol	96.22	96.69
HORVU4Hr1G069480.3	Barley	cytosol	95.72	94.94
Os03t0206700-00	Rice	plasma membrane	78.29	76.04
Zm00001d028056_P001	Maize	cytosol	69.9	71.19
KXG39906	Sorghum	cytosol	70.39	69.59
GSMUA_Achr7P26300_001	Banana	cytosol	59.38	60.98
CDY68489	Canola	cytosol, plastid	44.41	60.13
Solyc02g092560.2.1	Tomato	cytosol, nucleus	57.57	58.72
KRH04469	Soybean	cytosol	55.1	57.46
VIT_07s0129g00380.t01	Wine grape	cytosol	59.87	57.23
CDY37857	Canola	cytosol	56.25	57.0
KRH77099	Soybean	cytosol	57.57	56.63
AT5G67385.1	Thale cress	cytosol	56.25	56.62
KRH58066	Soybean	cytosol	54.77	56.44
KRH28386	Soybean	cytosol	58.06	56.03
Bra012158.1-P	Field mustard	cytosol	55.26	55.91
CDY12841	Canola	cytosol	55.43	55.89
CDY57436	Canola	cytosol	55.26	55.72
CDY30615	Canola	cytosol	42.93	52.3
CDY57361	Canola	cytosol	42.76	52.1
AT3G49970.2	Thale cress	extracellular	44.08	52.04
PGSC0003DMT400033866	Potato	cytosol	51.15	51.75
Solyc02g064720.2.1	Tomato	cytosol	51.48	51.74
Bra031830.1-P	Field mustard	cytosol	46.88	51.63
Bra036043.1-P	Field mustard	cytosol	43.42	48.18
TraesCS5A01G146300.1	Wheat	plastid	36.02	34.76
TraesCS4A01G192900.1	Wheat	cytosol	31.41	33.99
TraesCS7A01G184200.2	Wheat	plastid	36.02	32.78
TraesCS7A01G309700.1	Wheat	cytosol	32.07	30.33
TraesCS4A01G048200.1	Wheat	cytosol	29.61	29.7
TraesCS5A01G042600.1	Wheat	cytosol	30.59	29.38
TraesCS5A01G379300.1	Wheat	cytosol, plastid	31.09	29.03
TraesCS3A01G317300.1	Wheat	cytosol	30.92	28.97
TraesCS5A01G375500.3	Wheat	peroxisome	30.59	28.88
TraesCS5A01G403400.1	Wheat	cytosol	31.09	27.96
TraesCS5A01G070700.1	Wheat	cytosol	28.45	27.81
TraesCS2A01G526900.1	Wheat	cytosol	29.61	27.61
TraesCS6A01G085100.1	Wheat	cytosol	32.89	27.36
TraesCS4A01G236100.1	Wheat	cytosol	28.45	27.29
TraesCS7A01G149100.1	Wheat	cytosol	28.62	26.56
TraesCS6A01G208800.2	Wheat	cytosol	27.14	26.32
TraesCS5A01G171100.1	Wheat	cytosol	24.18	25.61
TraesCS5A01G223800.1	Wheat	cytosol	26.32	24.13

Protein Annotations

EnsemblPlants:TraesCS4A01G049300.1	EnsemblPlantsGene:TraesCS4A01G049300	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr4A:-:40250716..40253174

Molecular Weight (calculated)

66491.8 Da

IEP (calculated)

6.979

GRAVY (calculated)

-0.356

Length

608 amino acids

Sequence
(BLAST)

001: MQTDTQFTSA AMKRTSDWIR SQEFPSDITI QVGESSFNLH KLPLASKCGY IRKLVSGANG SRVTHLEIAG MPGDAKAFDL VIKFCYGVNF EITADNVAML
101: RCAAEHLEMT EECKPGNLVG RTEAYLEEVA LASLEGAVTA LRRAEELLPA SDKVQLIGRC IDVIATMTCG DGGHEGLDDV DAPPKPVDNW WADELTALRI
201: DTFQRVMIAM KARGFKGIAM GTMIMLYAQK SLRRLDMNGR ERKKMEPRQE HEKRVVLETI VSLLPREKNT MSVSFLSMLL RAAIYLDTSL ACRLDLETRM
301: AAQLGQAVLD DLLIPSSSPE GAGTAYDVDA VQRILAGYLE NEGEATRLDY NTDDDFASAA SPPNDVGPVG KLMESYLAEI SSDVNLPVDK FTGLAELIPE
401: RARFNEDGMY RAIDIYLKAH PSVGEGERTK VCGVMDCQKL SREACAHAAQ NDRLPVQTVV QVLYHEQRRL RVPPPSQAQS YAGGESPALS YRPTPSFNGR
501: DRSAPSSEVS RLQRENDELR MELMQMKMRL RDPSVAAPAP APTLAAGGTR SFPSSGKPPL PKKQGGSGGG GGGGFMKKLG RLNPFVRDPL AGGKVRTKPP
601: KDRRHSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.