Factsheet for Solyc02g064720.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033866	Potato	cytosol	95.04	95.67
Solyc02g092560.2.1	Tomato	cytosol, nucleus	67.11	68.12
VIT_07s0129g00380.t01	Wine grape	cytosol	68.26	64.94
CDY68489	Canola	cytosol, plastid	48.1	64.81
KRH77099	Soybean	cytosol	65.79	64.4
KRH04469	Soybean	cytosol	61.82	64.15
KRH58066	Soybean	cytosol	62.48	64.07
KRH28386	Soybean	cytosol	65.95	63.33
AT5G67385.1	Thale cress	cytosol	61.98	62.09
CDY12841	Canola	cytosol	61.49	61.69
CDY37857	Canola	cytosol	60.83	61.33
Bra012158.1-P	Field mustard	cytosol	60.83	61.23
CDY57436	Canola	cytosol	60.83	61.03
CDY30615	Canola	cytosol	48.59	58.92
CDY57361	Canola	cytosol	48.1	58.32
Bra031830.1-P	Field mustard	cytosol	53.06	58.15
GSMUA_Achr7P26300_001	Banana	cytosol	56.53	57.77
AT3G49970.2	Thale cress	extracellular	48.43	56.89
Bra036043.1-P	Field mustard	cytosol	48.76	53.83
TraesCS4B01G255500.1	Wheat	cytosol	51.57	51.57
TraesCS4A01G049300.1	Wheat	cytosol	51.74	51.48
TraesCS4D01G255500.1	Wheat	cytosol	51.9	51.31
HORVU4Hr1G069480.3	Barley	cytosol	51.74	51.06
Zm00001d028056_P001	Maize	cytosol	49.92	50.59
Os03t0206700-00	Rice	plasma membrane	51.24	49.52
KXG39906	Sorghum	cytosol	50.25	49.43
Solyc09g048980.2.1	Tomato	cytosol	35.21	40.34
Solyc07g043130.2.1	Tomato	cytosol	37.02	38.89
Solyc09g061250.2.1	Tomato	cytosol	38.51	38.39
Solyc09g074630.2.1	Tomato	cytosol	29.75	35.23
Solyc09g007820.1.1	Tomato	cytosol	30.74	31.16
Solyc02g021640.2.1	Tomato	nucleus	31.74	30.52
Solyc02g090070.2.1	Tomato	nucleus	32.56	30.26
Solyc05g013570.2.1	Tomato	nucleus	30.08	29.84
Solyc01g105680.2.1	Tomato	nucleus	32.89	29.75
Solyc10g047530.1.1	Tomato	cytosol	32.89	29.53
Solyc08g006870.2.1	Tomato	cytosol	29.92	29.43
Solyc01g107180.2.1	Tomato	cytosol	29.42	28.43
Solyc10g049660.1.1	Tomato	cytosol	28.26	27.99
Solyc11g066730.1.1	Tomato	cytosol	29.09	27.89
Solyc05g051580.2.1	Tomato	cytosol	28.59	27.72
Solyc03g044090.2.1	Tomato	cytosol	28.76	27.62
Solyc02g092480.2.1	Tomato	cytosol	27.93	26.91
Solyc01g098820.2.1	Tomato	cytosol, extracellular	24.3	26.53

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356	UniProt:K4B6Q8	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	EnsemblPlantsGene:Solyc02g064720.2	EnsemblPlants:Solyc02g064720.2.1	UniParc:UPI000276883F	SEG:seg

Description

No Description!

Coordinates

chr2:-:35825774..35829784

Molecular Weight (calculated)

68163.7 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.171

Length

605 amino acids

Sequence
(BLAST)

001: MMDLGSEQTT QPSTHVNRKV LLSNVMKRTS EWILSQDIPS DITIHVGRTS FALHKFPLVS KCGYIRKLVS KSNDAKLSTI EIPDIPGGPE AFELAAKFCY
101: EINFEISPEN IALIRCVAEY LEMTDDYAVG NLVGLTETYL TEVGLKSIAS SVSILHSSEK LLPIAEDIKL VNRSIDTIAY IVCKDSQYGL NSSTFDWWAD
201: DLTVLRIEFF QRVLIAMMAR GFKQYALGPI LMLYAQKSLG GLDISGKGRK QIEARIEHEK RVVLETIVSL LPREKNALSV SFLSLLLRAA IYLETTVSCR
301: VDLERRMSLQ LGQAVLDDVL FPSYSLTGDT FFDVETVKHI MMNFLEYEMV GNRLGFNDEE NMFPSASDME KVGKLMQDYL AEIASDSNLS VSEFISVAEV
401: IPEQLRITED MMYKAIDMYL KAHPALSDVE RKKVCSVMNC QKLTREACAH AAQNDRLPVQ IVVQVLYYEQ QRLRQVMDVS LVGADPPLPP PRPSKFNWFS
501: SGISPVTDEI SSLKRENQDL KFELMKLKMK CREIEKCDDK SAASTPLGIT TPPSDKPRLP RKSFITAVSR KLGKLYPSFG ADEVTIPSPS KRKNKPRRDR
601: RNSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.