CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68489	Canola	cytosol, plastid	73.83	98.66
Bra031830.1-P	Field mustard	cytosol	85.67	93.12
CDY12841	Canola	cytosol	92.17	91.71
CDY57436	Canola	cytosol	92.0	91.54
AT5G67385.1	Thale cress	cytosol	91.67	91.06
CDY57361	Canola	cytosol	61.17	73.55
CDY30615	Canola	cytosol	61.17	73.55
VIT_07s0129g00380.t01	Wine grape	cytosol	71.83	67.77
KRH04469	Soybean	cytosol	65.67	67.58
KRH77099	Soybean	cytosol	69.5	67.48
Solyc02g092560.2.1	Tomato	cytosol, nucleus	66.67	67.11
KRH58066	Soybean	cytosol	65.67	66.78
KRH28386	Soybean	cytosol	69.5	66.19
GSMUA_Achr7P26300_001	Banana	cytosol	64.67	65.54
PGSC0003DMT400033866	Potato	cytosol	61.33	61.23
Solyc02g064720.2.1	Tomato	cytosol	61.33	60.83
TraesCS4B01G255500.1	Wheat	cytosol	57.17	56.69
TraesCS4A01G049300.1	Wheat	cytosol	57.0	56.25
Zm00001d028056_P001	Maize	cytosol	55.83	56.11
TraesCS4D01G255500.1	Wheat	cytosol	57.17	56.05
HORVU4Hr1G069480.3	Barley	cytosol	56.67	55.46
KXG39906	Sorghum	cytosol	55.17	53.82
Os03t0206700-00	Rice	plasma membrane	55.5	53.19
CDX84827	Canola	cytosol	38.5	40.88
CDX86278	Canola	cytosol	42.17	40.81
CDX85365	Canola	cytosol	42.0	40.65
CDY10743	Canola	cytosol	38.83	40.1
CDY23992	Canola	cytosol	37.67	40.0
CDY02075	Canola	cytosol	38.5	39.83
CDX89922	Canola	cytosol	41.33	39.37
CDY18140	Canola	cytosol	40.83	38.89
CDY32492	Canola	cytosol	41.0	38.56
CDY52208	Canola	plastid	41.17	38.24
CDY09561	Canola	cytosol	37.67	37.42
CDY37449	Canola	cytosol	30.17	37.24
CDX73937	Canola	plastid	36.0	36.99
CDY00659	Canola	plastid	35.83	36.75
CDY02305	Canola	cytosol	37.17	36.74
CDY72257	Canola	cytosol	30.67	36.36
CDY72267	Canola	cytosol	30.67	36.36
CDX83030	Canola	plastid	32.17	36.07
CDX89539	Canola	cytosol	27.67	34.66
CDY72506	Canola	cytosol	7.33	34.65
CDY38923	Canola	cytosol	27.33	34.45
CDY10395	Canola	cytosol	31.17	34.44
CDX85639	Canola	cytosol	32.5	34.09
CDY45241	Canola	cytosol	33.83	33.95
CDX70320	Canola	cytosol	32.0	33.57
CDX73781	Canola	cytosol	30.33	33.39
CDX90249	Canola	cytosol, mitochondrion, nucleus	34.67	32.96
CDY30765	Canola	cytosol	34.33	32.49
CDX80858	Canola	cytosol	31.83	32.48
CDX77951	Canola	cytosol	29.67	32.48
CDX69627	Canola	cytosol	32.83	32.45
CDY27653	Canola	cytosol	33.17	32.2
CDY09812	Canola	cytosol	32.33	31.91
CDY12846	Canola	cytosol	30.0	31.86
CDY11245	Canola	cytosol	31.67	31.77
CDY09586	Canola	cytosol	34.67	31.71
CDX68790	Canola	cytosol	30.0	31.47
CDY02293	Canola	cytosol, mitochondrion, nucleus	34.5	31.41
CDY69095	Canola	cytosol	29.17	31.19
CDY37223	Canola	cytosol	31.33	31.18
CDX81462	Canola	cytosol	31.33	31.18
CDX99692	Canola	cytosol, mitochondrion, nucleus	33.5	31.16
CDX81314	Canola	cytosol	27.0	30.8
CDY44035	Canola	cytosol	29.17	30.43
CDX72639	Canola	cytosol	29.17	30.28
CDX75198	Canola	cytosol	29.0	30.16
CDY29566	Canola	cytosol	29.0	30.1
CDY50369	Canola	cytosol	25.67	30.02
CDY18660	Canola	cytosol	26.33	29.92
CDX84515	Canola	cytosol	36.0	29.75
CDY18715	Canola	cytosol	35.83	29.7
CDX81221	Canola	cytosol	36.0	29.59
CDY22422	Canola	cytosol	28.33	29.57
CDX83620	Canola	cytosol	26.83	29.43
CDX69851	Canola	cytosol	30.83	29.37
CDX96986	Canola	cytosol	30.0	28.75
CDY13635	Canola	cytosol	26.67	27.87
CDY29723	Canola	cytosol	29.83	25.68
CDY20341	Canola	cytosol	29.83	25.21
CDX77798	Canola	cytosol	23.17	24.78
CDY17704	Canola	cytosol	23.17	24.78
CDY12056	Canola	plasma membrane	35.17	13.07

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A078HJ18	InterPro:BTB/POZ_dom	EnsemblPlants:CDY37857	ProteinID:CDY37857
ProteinID:CDY37857.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00064816001
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF14	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniPathway:UPA00143	UniParc:UPI0004EE28EA
SEG:seg	:	:	:	:	:

Description

BnaAnng05180DBnaAnng05180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HJ18]

Coordinates

chrLK032409:-:342444..345226

Molecular Weight (calculated)

67342.2 Da

IEP (calculated)

7.474

GRAVY (calculated)

-0.361

Length

600 amino acids

Sequence
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLLSKCG LFKKLVSEST NDSDATVIKI PDIPGGSEAF ELTTKFCYGI NFDMSTENIA
101: MLRCASEYLE MTEEHSVENL ISRSEAYLNE VALKSLSSAI TVLHKSEELL PIAERVKLVS RCIDAIAYMT CQESQFCSPT SNNSNSEVVS KQPVVDWWAE
201: DLTVLRIDSF QRVLIAMMAR GFKQYGLGPV LMLYAQKSLR GLEIFGKGTK KIEPKQEHEK RVILETIVSL LPRERNAMSV SFLSMLLRAA IYLETTVACR
301: LDLEKRMGLQ LPQAVLDDLL IPSYSFTGEH SLFDTDTVQR ILMNYLEFEV EGVRLSNNGV DLAGDMEPVG KLMETYLAEI ASDRNVSLQK FTGLAELIPE
401: QSRVTEDGMY RAVDIYLKAH PNMSDVERKK VCSLMDCQKL SREACAHAAQ NDRLPVQTIV QVLYYEQQRL RGEVTNDSDS PAPPPPQPTA TVLPPPKLSS
501: YNDELSKVKR ENQDLKLELL KMKMKLKEFE KENNEKKSST TTTMSSNHSS PRSTASMDKP PLPRKSFINS VSKKLGKLNP FGIPPRGRTK PPKDRRHSIS

Best Arabidopsis Sequence Match ( AT5G67385.1 )
(BLAST)

001: MSAKKKDLLS SAMKRTSEWI SSQEVSSDVT VHVGEASFSL HKFPLMSKCG FIKKLVSESS KDSDSTVIKI PDIPGGSEAF ELAAKFCYGI NFDMSTENIA
101: MLRCAAEYLE MTEEHSVENL VVRAEAYLNE VALKSLSSSI TVLHKSEKLL PIAERVKLVS RCIDAIAYMT CQESHFCSPS SSNSGNNEVV VQQQSKQPVV
201: DWWAEDLTVL RIDSFQRVLI AMMARGFKQY GLGPVLMLYA QKSLRGLEIF GKGMKKIEPK QEHEKRVILE TIVSLLPREK NAMSVSFLSM LLRAAIFLET
301: TVACRLDLEN RMGLQLGQAV LDDLLIPSYS FTGDHSMFDT DTVQRILMNY LEFEVEGVRL SNNGVDLAGD MERVGKLLEN YMAEIASDRN VSLQKFIGLA
401: ELIPEQSRVT EDGMYRAVDI YLKAHPNMSD VERKKVCSLM DCQKLSREAC AHAAQNDRLP VQTIVQVLYY EQQRLRGEVT NDSDSPAPPP PQPAAVLPPK
501: LSSYTDELSK LKRENQDLKL ELLKMKMKLK EFEKESEKKT SSSTISTNPS SPISTASTGK PPLPRKSFIN SVSKKLGKLN PFSITPYNGR GRTKPPKDRR
601: HSIS

Arabidopsis Description

SR1IP1BTB/POZ domain-containing protein At5g67385 [Source:UniProtKB/Swiss-Prot;Acc:Q66GP0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.