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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024285.1-P Field mustard cytosol 99.17 99.31
AT5G64330.1 Thale cress cytosol 91.87 89.41
CDX81221 Canola cytosol 89.67 89.18
CDY18715 Canola cytosol 88.71 88.95
VIT_03s0038g00270.t01 Wine grape cytosol 73.0 78.64
PGSC0003DMT400083737 Potato cytosol 70.8 78.0
Solyc01g105680.2.1 Tomato nucleus 71.63 77.73
Solyc10g047530.1.1 Tomato cytosol 72.04 77.6
KRH42114 Soybean cytosol 71.76 77.53
GSMUA_Achr3P20380_001 Banana cytosol 61.16 77.22
PGSC0003DMT400006173 Potato cytosol 71.63 76.92
KRH23618 Soybean cytosol 53.03 76.09
KRH10586 Soybean cytosol 69.01 74.55
KRH21782 Soybean cytosol 69.01 74.0
KRH49804 Soybean endoplasmic reticulum, nucleus, plasma membrane, plastid 72.45 70.42
TraesCS6B01G117400.1 Wheat cytosol 63.77 62.74
TraesCSU01G114000.1 Wheat cytosol 63.5 62.64
TraesCS6A01G085100.1 Wheat cytosol 62.95 62.52
HORVU6Hr1G015480.1 Barley cytosol 62.95 62.52
Zm00001d016898_P001 Maize cytosol 62.53 60.61
Os02t0568200-00 Rice cytosol 63.36 60.37
EES07014 Sorghum nucleus 63.5 59.64
Zm00001d004440_P001 Maize cytosol 47.93 54.55
KXG25806 Sorghum cytosol 46.83 51.99
GSMUA_Achr1P21440_001 Banana cytosol 42.98 51.32
CDY72267 Canola cytosol 29.75 42.69
CDY72257 Canola cytosol 29.75 42.69
CDY68489 Canola cytosol, plastid 25.07 40.53
CDY38923 Canola cytosol 26.31 40.13
CDX89539 Canola cytosol 26.17 39.67
CDX90249 Canola cytosol, mitochondrion, nucleus 34.44 39.62
CDX96986 Canola cytosol 34.02 39.46
CDY10395 Canola cytosol 29.2 39.04
CDX69851 Canola cytosol 33.75 38.89
CDX70320 Canola cytosol 30.58 38.81
CDY09586 Canola cytosol 34.99 38.72
CDY02293 Canola cytosol, mitochondrion, nucleus 35.12 38.7
CDX85639 Canola cytosol 30.44 38.64
CDX81314 Canola cytosol 27.82 38.4
CDY12846 Canola cytosol 29.75 38.23
CDY18660 Canola cytosol 27.69 38.07
CDY22422 Canola cytosol 30.03 37.91
CDY27653 Canola cytosol 32.23 37.86
CDX73781 Canola cytosol 28.37 37.8
CDY69095 Canola cytosol 29.2 37.79
CDX80858 Canola cytosol 30.58 37.76
CDY44035 Canola cytosol 29.89 37.74
CDX72639 Canola cytosol 29.75 37.37
CDY11245 Canola cytosol 30.58 37.12
CDY45241 Canola cytosol 30.44 36.96
CDX77951 Canola cytosol 27.82 36.86
CDY29566 Canola cytosol 29.34 36.85
CDY09812 Canola cytosol 30.85 36.84
CDX99692 Canola cytosol, mitochondrion, nucleus 32.64 36.74
CDX69627 Canola cytosol 30.72 36.74
CDY50369 Canola cytosol 25.76 36.45
CDX81462 Canola cytosol 30.03 36.15
CDY37857 Canola cytosol 29.75 36.0
CDY30765 Canola cytosol 31.41 35.96
CDX68790 Canola cytosol 28.24 35.84
CDY37223 Canola cytosol 29.75 35.82
CDY30615 Canola cytosol 24.38 35.47
CDY10743 Canola cytosol 28.24 35.28
CDY57361 Canola cytosol 24.24 35.27
CDX84827 Canola cytosol 27.41 35.22
CDY23992 Canola cytosol 27.41 35.22
CDY57436 Canola cytosol 29.2 35.16
CDY12841 Canola cytosol 29.2 35.16
CDX75198 Canola cytosol 27.82 35.01
CDX86278 Canola cytosol 29.89 35.0
CDY02075 Canola cytosol 27.82 34.83
CDY37449 Canola cytosol 23.28 34.77
CDX77798 Canola cytosol 26.86 34.76
CDX85365 Canola cytosol 29.61 34.68
CDY17704 Canola cytosol 26.72 34.58
CDX83620 Canola cytosol 25.76 34.19
CDY18140 Canola cytosol 29.48 33.97
CDX89922 Canola cytosol 29.34 33.81
CDX73937 Canola plastid 27.14 33.73
CDY00659 Canola plastid 27.0 33.5
CDY09561 Canola cytosol 27.82 33.44
CDY32492 Canola cytosol 29.34 33.39
CDY02305 Canola cytosol 27.69 33.11
CDY52208 Canola plastid 29.34 32.97
CDY13635 Canola cytosol 26.03 32.93
CDX83030 Canola plastid 23.97 32.52
CDY29723 Canola cytosol 30.44 31.71
CDY20341 Canola cytosol 30.17 30.85
CDY72506 Canola cytosol 5.23 29.92
CDY12056 Canola plasma membrane 33.88 15.24
Protein Annotations
MapMan:19.2.2.8.2.2.1Gene3D:3.30.710.10GO:A0A078D5Z1InterPro:BTB/POZ_domEnsemblPlants:CDX84515ProteinID:CDX84515
ProteinID:CDX84515.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00141746001
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3-likeInterPro:NPH3_domPFAM:PF03000PFscan:PS50097
PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF6InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EDC349SEG:seg::::
Description
BnaC03g49850D
Coordinates
chrLK031837:+:1563525..1567108
Molecular Weight (calculated)
80437.8 Da
IEP (calculated)
8.102
GRAVY (calculated)
-0.437
Length
726 amino acids
Sequence
(BLAST)
001: MWESESDSGV VGGGGREYGN GVLSSNKHAG VKTDGFELRG QSWFVATDIP SDLLVKIGDM NFHLHKYPLL SRSGKMNRLI YESRDPDPTI LLLDDLPGGP
101: EAFELASKFC YGVPVDLTAT NISGLRCAAE YLEMTEDLEE GNLIFKTEAF LSYVVLSSWR DSILVLKSCE KLSPWAENLQ IVRRCSESIA WKACSNPKGI
201: KWAYTGKSPS PSTANNFASS SPKWKDPKDS GFYSSPSRNN NNNNQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGASITHYAG KWLPGLIKEG
301: TPDEMSVSHG SNSSGGSSGP DWRGGLHMVL SGKPNGQHQQ DSAPYLAGHG ISPKDQRMIV ESLISIIPPQ KDSVTCTFLL RLLRAANMLK VAPALITELE
401: KRVGMQFEQA TLQDLLIPSY SNKGETMYDV DLVQRLLEHF LVQEQTEGSS PSRMSPYADA GIPRANSISG GGGGNGSSNQ NAKMRVARLV DSYLTEVARD
501: RNLPLTKFQV LAEALPESAR SCDDGLYRAI DSYLKAHPTL SEHERKRLCR VMDCQKLSMD ACMHAAQNER LPLRVVVQVL FSEQVKISNA LANTSLKEST
601: TLGEAMGTTY QPMIPNRKTL IEATPQSFQA SWAAAKKDIN TLKFELETVK TKYVELQNEM EVMQRQFEKT GKVKNISSSA WTSGWKKLSK LTKMSGHETQ
701: DMVGGEQAGV DHQPTRKPRR WRNSIS
Best Arabidopsis Sequence Match ( AT5G64330.1 )
(BLAST)
001: MMWESESDGG VGVGGGGGRE YGDGVLSSNK HGGVKTDGFE LRGQSWFVAT DIPSDLLVKI GDMNFHLHKY PLLSRSGKMN RLIYESRDPD PTILILDDLP
101: GGPEAFELAS KFCYGVPVDL TATNISGLRC AAEYLEMTED LEEGNLIFKT EAFLSYVVLS SWRDSILVLK SCEKLSPWAE NLQIVRRCSE SIAWKACSNP
201: KGIRWAYTGK APSPSTTNFA GSSPRWNESK DSSFYCSPSR NTNSQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGAVIMHYAG KWLPGLIKEG
301: GVAIAPAMSS AIGGGLGLGG DEMSISCGSN SSGGSSGPDW KGGLHMVLSA GKTNGHQDSV ACLAGLGISP KDQRMIVESL ISIIPPQKDS VTCSFLLRLL
401: RAANMLKVAP ALITELEKRV GMQFEQATLQ DLLIPGYNNK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSPSQSMY ADIPRGNNNN GGGGGGNNQN
501: AKMRVARLVD SYLTEVARDR NLPLTKFQVL AEALPESART CDDGLYRAID SYLKAHPTLS EHERKRLCRV MDCQKLSMDA CMHAAQNERL PLRVVVQVLF
601: SEQVKISNAL ANTSLKESTT LGEAMGTYQP MIPNRKTLIE ATPQSFQEGW AAAKKDINTL KFELETVKTK YVELQNEMEV MQRQFEKTGK VKNTPSSSAW
701: TSGWKKLSKL TKMSGQESHD ISSGGEQAGV DHPPPRKPRR WRNSIS
Arabidopsis Description
RPT3Root phototropism protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.