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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:plastid
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025440.1-P Field mustard cytosol 87.86 94.76
CDX99692 Canola cytosol, mitochondrion, nucleus 94.34 90.39
AT1G30440.1 Thale cress cytosol, mitochondrion, nucleus 83.33 77.44
CDY09586 Canola cytosol 81.88 77.13
CDY02293 Canola cytosol, mitochondrion, nucleus 82.04 76.93
CDX90249 Canola cytosol, mitochondrion, nucleus 76.38 74.8
PGSC0003DMT400008211 Potato cytosol, mitochondrion 66.99 65.82
Solyc02g021640.2.1 Tomato nucleus 66.99 65.82
VIT_10s0003g04490.t01 Wine grape cytosol 66.99 65.51
KRH37734 Soybean cytosol 66.5 63.92
KRH12771 Soybean cytosol 66.02 63.45
GSMUA_Achr5P02440_001 Banana cytosol 55.83 60.21
GSMUA_Achr6P30010_001 Banana cytosol 52.91 59.67
EER91175 Sorghum cytosol 60.03 58.8
Zm00001d033240_P002 Maize cytosol, mitochondrion, nucleus 59.71 58.66
GSMUA_Achr5P00550_001 Banana cytosol 59.06 58.03
GSMUA_Achr4P31620_001 Banana cytosol 55.83 57.79
GSMUA_Achr9P26110_001 Banana cytosol 55.66 56.77
HORVU5Hr1G093120.2 Barley cytosol 57.44 55.99
TraesCS5D01G385100.1 Wheat plastid 57.61 55.97
TraesCS5A01G042600.1 Wheat cytosol 56.63 55.29
TraesCS5D01G051100.1 Wheat cytosol 56.47 55.22
Os12t0613250-00 Rice plasma membrane 57.93 55.08
Os08t0130600-01 Rice plasma membrane 56.63 54.6
TraesCS5A01G375500.3 Wheat peroxisome 55.5 53.26
HORVU7Hr1G073650.1 Barley cytosol 55.02 53.04
TraesCS5B01G377600.1 Wheat cytosol 58.09 52.95
TraesCS7D01G306400.1 Wheat cytosol 55.02 52.88
EES14497 Sorghum cytosol 56.15 52.74
TraesCS7A01G309700.1 Wheat cytosol 54.53 52.41
TraesCS7B01G209700.1 Wheat cytosol 54.53 52.41
TraesCS5B01G046200.2 Wheat mitochondrion 54.37 52.34
Zm00001d035208_P002 Maize cytosol 55.02 51.28
CDY10395 Canola cytosol 44.5 50.64
CDX70320 Canola cytosol 45.47 49.13
CDX80858 Canola cytosol 45.15 47.45
CDY11245 Canola cytosol 45.15 46.66
CDX85639 Canola cytosol 42.56 45.98
HORVU5Hr1G010370.2 Barley plastid 56.31 44.11
CDX69627 Canola cytosol 43.2 43.99
CDY09812 Canola cytosol 43.2 43.91
CDX77951 Canola cytosol 37.7 42.52
CDY45241 Canola cytosol 40.61 41.97
CDX73781 Canola cytosol 36.89 41.83
CDY72506 Canola cytosol 8.58 41.73
CDY30765 Canola cytosol 42.39 41.32
CDY29723 Canola cytosol 41.26 36.59
CDY72267 Canola cytosol 29.94 36.56
CDY72257 Canola cytosol 29.77 36.36
CDY20341 Canola cytosol 41.75 36.34
CDY38923 Canola cytosol 27.83 36.13
CDX89539 Canola cytosol 27.83 35.91
CDX85365 Canola cytosol 35.92 35.81
CDX86278 Canola cytosol 35.76 35.65
CDY68489 Canola cytosol, plastid 25.89 35.63
CDY00659 Canola plastid 32.2 34.02
CDX73937 Canola plastid 32.04 33.9
CDY22422 Canola cytosol 31.07 33.39
CDX81314 Canola cytosol 28.32 33.27
CDY37857 Canola cytosol 32.2 33.17
CDY44035 Canola cytosol 30.74 33.04
CDY29566 Canola cytosol 30.74 32.87
CDX72639 Canola cytosol 30.74 32.87
CDY18660 Canola cytosol 27.99 32.77
CDY09561 Canola cytosol 31.72 32.45
CDY69095 Canola cytosol 29.45 32.44
CDX84515 Canola cytosol 37.86 32.23
CDY57436 Canola cytosol 31.39 32.17
CDY12841 Canola cytosol 31.39 32.17
CDY02305 Canola cytosol 31.55 32.13
CDX84827 Canola cytosol 29.29 32.04
CDY10743 Canola cytosol 30.1 32.01
CDY02075 Canola cytosol 29.94 31.9
CDY23992 Canola cytosol 29.13 31.86
CDX83620 Canola cytosol 28.16 31.81
CDY18715 Canola cytosol 37.22 31.77
CDY30615 Canola cytosol 25.57 31.66
CDY12846 Canola cytosol 28.8 31.5
CDY57361 Canola cytosol 25.4 31.46
CDX81221 Canola cytosol 36.73 31.1
CDX81462 Canola cytosol 30.26 31.01
CDY13635 Canola cytosol 28.8 31.01
CDY52208 Canola plastid 32.36 30.96
CDX89922 Canola cytosol 31.39 30.79
CDY18140 Canola cytosol 31.39 30.79
CDY37223 Canola cytosol 29.94 30.68
CDX68790 Canola cytosol 28.32 30.59
CDY32492 Canola cytosol 31.07 30.09
CDX75198 Canola cytosol 27.83 29.81
CDY17704 Canola cytosol 26.86 29.59
CDX77798 Canola cytosol 26.86 29.59
CDY37449 Canola cytosol 22.98 29.22
CDY50369 Canola cytosol 24.11 29.04
CDY12056 Canola plasma membrane 75.73 29.0
CDX83030 Canola plastid 24.27 28.04
CDX69851 Canola cytosol 28.32 27.78
CDX96986 Canola cytosol 27.51 27.16
Os12t0613300-02 Rice nucleus 1.13 2.36
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078GSS1InterPro:BTB/POZ_domEnsemblPlants:CDY27653ProteinID:CDY27653
ProteinID:CDY27653.1GO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00038418001InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF12InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143UniParc:UPI0004EDC803
SEG:seg:::::
Description
BnaUnng00030DBnaUnng00030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSS1]
Coordinates
chrLK032208:+:15072..17846
Molecular Weight (calculated)
69177.4 Da
IEP (calculated)
6.915
GRAVY (calculated)
-0.293
Length
618 amino acids
Sequence
(BLAST)
001: MLTGSMACMK LGSKSDSFKR QGQDWFCTTG LPSDIIIEVG EVSFHLHKFP LLSRSGVMER RIAEASKEGD DKCLIQISDF PGGDKTFELV AKFCYGVKLE
101: LTASNVVYLR CAAKHLEMTE EYGEGNLISQ TGKFFNQVVF KSWKYSIKAL QCCDEVLKYA DEFNITKKCI ESLAMRALAD PNSFVKHGGG PMQSPGGSVL
201: WNGISTGARR EDTSSDWWYE DASMLSFALF KRLITLMDSR GIREEIVAGS LTYYTRKYLP VLKRRHSGSS SITPLSSGSS VLLSEEEQKH LLEEIQELDL
301: PCMQKGLLPT KFFVDMLIIA KILKASPSCI ENLEKRIGMQ LDKATLEDLV MPSFSHTMDT LYDVDSVQRI LDHFLNGNLN GSPQSMAAVA KLIDGYLAEV
401: APDVNLKLAK FQALAASVPE YARLLDDGLY RAIDIYLKHH PWLAETERED LCRLLDCQKL STEACTHAAQ NERLPLRIIV QVLFIEQLQL KASVSECLPL
501: GSDGFSGEST KGGWETAVRE NQDLRVGMDK MRMRVCELEK ECSNMRQEIE KLDMTTKGGG ASRSGSKTWE NVSKKLGFGM KLKSHQIDSA QKVSSLKSNN
601: ENVKIEKLKD VKERQGKY
Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)
001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER
Arabidopsis Description
BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.