Factsheet for HORVU5Hr1G093120.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 3
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G385100.1	Wheat	plastid	96.85	96.54
TraesCS5A01G375500.3	Wheat	peroxisome	93.06	91.61
TraesCS5B01G377600.1	Wheat	cytosol	96.85	90.56
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	84.54	85.21
EER91175	Sorghum	cytosol	84.7	85.1
VIT_10s0003g04490.t01	Wine grape	cytosol	70.5	70.73
GSMUA_Achr4P31620_001	Banana	cytosol	65.14	69.18
GSMUA_Achr5P02440_001	Banana	cytosol	62.15	68.76
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	67.82	68.36
Solyc02g021640.2.1	Tomato	nucleus	67.82	68.36
KRH12771	Soybean	cytosol	68.93	67.96
GSMUA_Achr6P30010_001	Banana	cytosol	58.36	67.52
KRH37734	Soybean	cytosol	68.3	67.34
GSMUA_Achr9P26110_001	Banana	cytosol	62.3	65.18
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	65.46	62.41
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	64.98	62.33
CDY02293	Canola	cytosol, mitochondrion, nucleus	64.67	62.22
CDY09586	Canola	cytosol	64.35	62.2
CDX90249	Canola	cytosol, mitochondrion, nucleus	61.83	62.12
HORVU7Hr1G073650.1	Barley	cytosol	61.36	60.69
HORVU5Hr1G010370.2	Barley	plastid	74.92	60.2
CDY27653	Canola	cytosol	55.99	57.44
CDX99692	Canola	cytosol, mitochondrion, nucleus	57.1	56.12
Bra025440.1-P	Field mustard	cytosol	50.47	55.85
HORVU3Hr1G076740.1	Barley	cytosol	50.95	50.23
HORVU5Hr1G093880.1	Barley	cytosol	26.81	40.87
HORVU5Hr1G098170.1	Barley	cytosol, mitochondrion	41.96	38.83
HORVU5Hr1G093850.15	Barley	mitochondrion	40.06	38.72
HORVU1Hr1G055870.1	Barley	plastid	35.17	33.53
HORVU4Hr1G069760.10	Barley	cytosol	32.18	33.33
HORVU5Hr1G046340.2	Barley	plastid	32.81	32.86
HORVU5Hr1G018480.1	Barley	cytosol	31.55	31.75
HORVU6Hr1G015480.1	Barley	cytosol	36.12	31.33
HORVU5Hr1G064620.1	Barley	cytosol	30.44	30.3
HORVU0Hr1G011770.1	Barley	cytosol	21.61	30.11
HORVU4Hr1G069480.3	Barley	cytosol	29.02	30.02
HORVU7Hr1G030460.8	Barley	cytosol	30.76	29.55
HORVU6Hr1G053490.2	Barley	cytosol	29.18	29.51
HORVU7Hr1G097110.6	Barley	cytosol	21.45	25.09
HORVU4Hr1G023260.3	Barley	cytosol, plastid	24.29	24.6
CDY12056	Canola	plasma membrane	62.62	24.6
HORVU0Hr1G012710.2	Barley	cytosol, plastid	21.92	23.88
HORVU1Hr1G034650.1	Barley	plasma membrane, vacuole	23.66	23.11

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:HORVU5Hr1G093120	EnsemblPlants:HORVU5Hr1G093120.2	InterPro:IPR000210	InterPro:IPR027356	UniProt:M0YJB5
InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370
PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002968C91	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:590269719..590275134

Molecular Weight (calculated)

70216.9 Da

IEP (calculated)

6.639

GRAVY (calculated)

-0.218

Length

634 amino acids

Sequence
(BLAST)

001: MAASASVKLG SKPDAFRRQG QAWFCTTGLP SDVTVEVGNM SFHLHKFPLL SKSAVLEQLI EESSDQEECI IKLNDIPGGA KSFEMVARFC YGVKIELSSA
101: NVVHLRCASE HLQMTEEISD DNLIAQTEMF LNQVVLRNWK DSLKALETCD DLLPHAEDLH IVKRCIESLA SKATTDPNLF GWPIREHGIM QSPGGSVLWN
201: GISTGARPRN FSSDWWYDDV SSLSFPMYKR LLSGMESRRI RPEIIAGSLA YYARKYIPGL SRRNSMGAMP LAGTLSDVEQ RNLLEEIDRL LPLQKGLVPT
301: KLLLGLLQTS MILKTSSTCI ANLEKRVGMQ LDQASLEDLL LPNYSYTMET LYNVECMHRI VEHFLAMDQA NGGCSPCIDD MMASPSMIPI TAVAKLLDGY
401: LAEVAPDVNL KPPKFQALAS ALPEYARPLD DGLYRAIDVY LKAHSWLSET EREQLCRLMD CQKLSLEACT HAAQNERLPL RVVVQVLFFE QLQLRTSIAG
501: CLLVSDNLEG SSRPLRSGGI AMSGEAGGWT AAVRENQVLK VGMDNMRMRL AELEKECSDM RQEIEKLGRG GKGGSGGGGG WASHVPRRFS LKMKPQMCST
601: QEGSVSEQQK SMSAKLDKLQ AKLSKQKRQL SADA

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.