Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G038180.2 | |
| HORVU4Hr1G006120.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G66560.1 | HORVU2Hr1G038180.2 | AT1G03140.1 | 21798944 |
| AT5G66560.1 | HORVU4Hr1G006120.1 | AT1G03140.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G413400.1 | Wheat | cytosol | 94.16 | 95.84 |
| TraesCS5A01G403400.1 | Wheat | cytosol | 94.31 | 95.56 |
| TraesCS5B01G408200.1 | Wheat | cytosol | 94.01 | 95.55 |
| Os03t0767600-01 | Rice | cytosol | 82.77 | 83.02 |
| EER93390 | Sorghum | cytosol | 81.31 | 82.4 |
| Zm00001d013182_P003 | Maize | cytosol, mitochondrion | 79.42 | 77.38 |
| GSMUA_Achr8P04840_001 | Banana | cytosol | 45.69 | 53.23 |
| HORVU5Hr1G093880.1 | Barley | cytosol | 32.12 | 52.88 |
| VIT_00s0207g00230.t01 | Wine grape | cytosol | 48.76 | 52.6 |
| CDY45241 | Canola | cytosol | 44.53 | 51.0 |
| KRH08351 | Soybean | cytosol | 47.88 | 50.62 |
| Solyc02g090070.2.1 | Tomato | nucleus | 48.03 | 50.54 |
| KRH28552 | Soybean | cytosol | 43.36 | 50.17 |
| PGSC0003DMT400026008 | Potato | cytosol | 47.88 | 49.77 |
| HORVU5Hr1G093850.15 | Barley | mitochondrion | 47.59 | 49.7 |
| AT3G50840.1 | Thale cress | cytosol | 41.17 | 49.56 |
| CDY30765 | Canola | cytosol | 45.4 | 49.05 |
| CDX73781 | Canola | cytosol | 38.39 | 48.26 |
| KRH76914 | Soybean | cytosol | 35.91 | 48.24 |
| CDX77951 | Canola | cytosol | 38.25 | 47.81 |
| KRH69999 | Soybean | endoplasmic reticulum | 47.45 | 47.79 |
| Bra036858.1-P | Field mustard | cytosol | 39.71 | 47.39 |
| Bra012082.1-P | Field mustard | cytosol | 45.99 | 47.09 |
| AT5G66560.1 | Thale cress | cytosol | 45.84 | 47.01 |
| HORVU5Hr1G093120.2 | Barley | cytosol | 38.83 | 41.96 |
| HORVU7Hr1G073650.1 | Barley | cytosol | 36.93 | 39.47 |
| HORVU3Hr1G076740.1 | Barley | cytosol | 35.04 | 37.33 |
| HORVU5Hr1G010370.2 | Barley | plastid | 38.98 | 33.84 |
| HORVU5Hr1G046340.2 | Barley | plastid | 29.34 | 31.75 |
| HORVU4Hr1G069480.3 | Barley | cytosol | 28.03 | 31.32 |
| HORVU1Hr1G055870.1 | Barley | plastid | 29.2 | 30.08 |
| HORVU4Hr1G069760.10 | Barley | cytosol | 26.28 | 29.41 |
| HORVU5Hr1G018480.1 | Barley | cytosol | 27.01 | 29.37 |
| HORVU6Hr1G053490.2 | Barley | cytosol | 26.86 | 29.35 |
| HORVU7Hr1G030460.8 | Barley | cytosol | 28.18 | 29.24 |
| HORVU0Hr1G011770.1 | Barley | cytosol | 18.98 | 28.57 |
| HORVU4Hr1G023260.3 | Barley | cytosol, plastid | 25.84 | 28.27 |
| HORVU5Hr1G064620.1 | Barley | cytosol | 25.69 | 27.63 |
| HORVU6Hr1G015480.1 | Barley | cytosol | 29.2 | 27.36 |
| HORVU7Hr1G097110.6 | Barley | cytosol | 19.85 | 25.09 |
| HORVU1Hr1G034650.1 | Barley | plasma membrane, vacuole | 23.36 | 24.65 |
| GSMUA_Achr3P25690_001 | Banana | nucleus | 42.04 | 24.12 |
| HORVU0Hr1G012710.2 | Barley | cytosol, plastid | 20.0 | 23.54 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G098170.1 | EnsemblPlantsGene:HORVU5Hr1G098170 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:BTB/POZ_dom |
| InterPro:IPR000210 | InterPro:IPR027356 | InterPro:NPH3_dom | InterPro:SKP1/BTB/POZ_sf | ncoils:Coil | PANTHER:PTHR32370 |
| PANTHER:PTHR32370:SF8 | PFAM:PF03000 | PFscan:PS50097 | PFscan:PS51649 | SEG:seg | SMART:SM00225 |
| SUPFAM:SSF54695 | UniParc:UPI000B46D173 | UniProt:A0A287SG67 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:606498542..606502938
Molecular Weight (calculated)
72212.7 Da
IEP (calculated)
5.985
GRAVY (calculated)
-0.360
Length
685 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQGSRKAXX XXXXXXXXXX XXXXXXXKRE DQQQHSPKGQ AWFCTTGLPS DVVIEVGDMT FHLHKFPLMS KSKKIHDLIM NKESSLARQA GGGGDEEEED
101: GAGEIREEEV VLEADEEADA HRIRLPDFPG GAEAFELAAK FCYGVKLDLT PATAAPLRCA AERLGMSDDH AEDNLVSRAD RFMSHTVLRN PRDAIRALRS
201: CEGLLPLADD LGLVSRCVDA IAAKAAASTP TALFGWPIND AGAGDRPRHK KNAGAGATST LFDDLAGLSL STFTRVIAAM RERGVGPEVL EGALIAYAKR
301: SIPGLSRSDR HAGGGAAAAA AAPRSADGDQ KALLETVIVN LPEETIKSSA HTGTAVGATT ARVLFGLLRT ANILQASEAS RDMLERRVAS RLPDAAVDDL
401: LIPSYSYLVE TLYDVDCVER IVRHFLEGRG GGVEEVDEEC SEAETPGREA SRRAMLAVGR LMDAYLGEIA TDANLKTDKF CDLAWALPDG ARVYDDGLYR
501: AVDIYIKAHP ALREEEKEKV SGVVDGRKLT LEACTHAAQN ERLPLRTVVQ VLFFEQLQLR RAIARTMVAN EGGAAVQGEE EGDSDGGRTW RVATRGNQML
601: RLDMDSMRNR VQELERECTT MRKAIQKIDR RGGAAGDRGA APAAEGRWGS MVTKRFGCKF PAQVCQSQPR SVVARPRRAR IEQSP
101: GAGEIREEEV VLEADEEADA HRIRLPDFPG GAEAFELAAK FCYGVKLDLT PATAAPLRCA AERLGMSDDH AEDNLVSRAD RFMSHTVLRN PRDAIRALRS
201: CEGLLPLADD LGLVSRCVDA IAAKAAASTP TALFGWPIND AGAGDRPRHK KNAGAGATST LFDDLAGLSL STFTRVIAAM RERGVGPEVL EGALIAYAKR
301: SIPGLSRSDR HAGGGAAAAA AAPRSADGDQ KALLETVIVN LPEETIKSSA HTGTAVGATT ARVLFGLLRT ANILQASEAS RDMLERRVAS RLPDAAVDDL
401: LIPSYSYLVE TLYDVDCVER IVRHFLEGRG GGVEEVDEEC SEAETPGREA SRRAMLAVGR LMDAYLGEIA TDANLKTDKF CDLAWALPDG ARVYDDGLYR
501: AVDIYIKAHP ALREEEKEKV SGVVDGRKLT LEACTHAAQN ERLPLRTVVQ VLFFEQLQLR RAIARTMVAN EGGAAVQGEE EGDSDGGRTW RVATRGNQML
601: RLDMDSMRNR VQELERECTT MRKAIQKIDR RGGAAGDRGA APAAEGRWGS MVTKRFGCKF PAQVCQSQPR SVVARPRRAR IEQSP
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.