Factsheet for HORVU4Hr1G006120.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G036020.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03140.1	HORVU6Hr1G036020.1	AT4G32190.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0701100-01	Rice	cytosol, nucleus, plastid	32.11	38.36
TraesCS4B01G038900.1	Wheat	cytosol, mitochondrion, nucleus, plastid	36.84	36.65
TraesCS4D01G035800.1	Wheat	nucleus	36.58	36.2
TraesCS4A01G275400.1	Wheat	cytosol	36.05	35.49
KXG37778	Sorghum	cytosol, mitochondrion, nucleus, plastid	32.63	33.07
Zm00001d013489_P001	Maize	cytosol, mitochondrion, nucleus, plastid	32.37	32.71
KRG95545	Soybean	nucleus	23.95	22.14
KRH67222	Soybean	nucleus	23.16	21.31
VIT_07s0151g01010.t01	Wine grape	nucleus	22.37	20.63
Solyc09g065280.2.1	Tomato	nucleus	22.11	20.34
PGSC0003DMT400049840	Potato	nucleus	22.11	20.34
CDY37439	Canola	nucleus	20.53	19.45
AT1G03140.1	Thale cress	nucleus	21.32	19.29
Bra032556.1-P	Field mustard	nucleus	21.05	19.28
CDY32499	Canola	nucleus	20.53	19.26
CDY15450	Canola	nucleus	21.32	19.06
Bra030520.1-P	Field mustard	nucleus	21.05	18.82
PGSC0003DMT400027505	Potato	cytosol	17.11	17.38
Solyc07g052190.1.1	Tomato	cytosol	15.26	17.21
PGSC0003DMT400027500	Potato	nucleus	15.79	17.14
HORVU2Hr1G038180.2	Barley	mitochondrion	19.47	16.82
AT1G54590.1	Thale cress	nucleus	11.05	11.63
Solyc07g052050.1.1	Tomato	mitochondrion	4.47	7.62
GSMUA_Achr1P22990_001	Banana	cytosol	1.58	5.17
Bra041171.1-P	Field mustard	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G006120.1	EnsemblPlantsGene:HORVU4Hr1G006120	Gene3D:1.10.720.150	InterPro:IPR036285	InterPro:PRP4-like	InterPro:PRP4-like_sf
ncoils:Coil	PANTHER:PTHR13007	PANTHER:PTHR13007:SF20	PFAM:PF08799	SEG:seg	SMART:SM00500
SUPFAM:SSF158230	UniParc:UPI000B45FB80	UniProt:A0A287N1Z6	MapMan:35.2	:	:

Description

No Description!

Coordinates

chrchr4H:-:14631333..14632741

Molecular Weight (calculated)

42247.1 Da

IEP (calculated)

12.048

GRAVY (calculated)

-0.870

Length

380 amino acids

Sequence
(BLAST)

001: PRALCNLGLS GKNVAGRELP WRFKGWRVFA RVRSPSSFSM DPERELWNLP DPAAPAPAKS QKPAAPRFDP SQSQPQPPRE PSTPRLLSPQ HTDRSTRAIA
101: MDVLKRELQR KRQQLDADFG GRRVLRRAEI EAREIQRLRV AERERLVQKR RKEEQLRSHP AASSFSLPPA AAVADEVKAG DRAEGFMVES LPREEVIRLL
201: RLLRQPATLF GEDDAARLRR LHDALQDPAA VADVDAAEIG EGQTNDFLRD IHALRLRAKA TAKPKAVATE RGEEKRRCRS TSSATRTRSR PSSSGCWASG
301: AASWTRCPMP RRRARPRRPP ANSARATWSR SSGCATGRPS PATSGGRSRT WCGAACGGTT WRRRAATSSW RSATRRGRSG

Best Arabidopsis Sequence Match ( AT1G03140.1 )
(BLAST)

001: MDLLREEILK KRKSLAEESG GKKFFKRSEI EQKKIQKLRE EERREHELKA QRRAAAAASG GDGKSSGSAP GSSNAATSAS SKSSASDAAA IADSKALTDE
101: NLILPRQEVI RRLRFLKQPM TLFGEDDQSR LDRLKYVLKE GLFEVDSDMT EGQTNDFLRD IAELKKRQKS GMMGDRKRKS RDERGRDEGD RGETREDELS
201: GGESSDVDAD KDMKRLKANF EDLCDEDKIL VFYKKLLIEW KQELDAMENT ERRTAKGKQM VATFKQCARY LVPLFNLCRK KGLPADIRQA LMVMVNHCIK
301: RDYLAAMDHY IKLAIGNAPW PIGVTMVGIH ERSAREKIYT NSVAHIMNDE TTRKYLQSVK RLMTFCQRRY PTMPSKAVEF NSLANGSDLQ SLLAEERFFG
401: GNREQVSEER LRLMPSQSES

Arabidopsis Description

F10O3.3 protein [Source:UniProtKB/TrEMBL;Acc:Q9SA55]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.