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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • mitochondrion 3
  • cytosol 2
  • plasma membrane 1
  • plastid 2
PPI

Inferred distinct locusB in Crop

locusBlocations
EER90674
EER99582
KXG37778

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013182_P003 Maize cytosol, mitochondrion 96.01 92.32
Os03t0767600-01 Rice cytosol 86.54 85.65
TraesCS5A01G403400.1 Wheat cytosol 83.58 83.58
TraesCS5B01G408200.1 Wheat cytosol 83.14 83.38
TraesCS5D01G413400.1 Wheat cytosol 82.99 83.36
HORVU5Hr1G098170.1 Barley cytosol, mitochondrion 82.4 81.31
GSMUA_Achr8P04840_001 Banana cytosol 48.08 55.27
VIT_00s0207g00230.t01 Wine grape cytosol 50.74 54.02
KRH08351 Soybean cytosol 51.33 53.55
OQU91026 Sorghum cytosol, nucleus, plastid 46.89 53.01
KRH28552 Soybean cytosol 46.15 52.7
Solyc02g090070.2.1 Tomato nucleus 50.74 52.69
CDY45241 Canola cytosol 46.15 52.17
PGSC0003DMT400026008 Potato cytosol 50.3 51.59
KRH69999 Soybean endoplasmic reticulum 51.48 51.18
AT3G50840.1 Thale cress cytosol 43.05 51.14
KRH76914 Soybean cytosol 38.17 50.59
CDY30765 Canola cytosol 47.04 50.16
CDX73781 Canola cytosol 39.5 48.99
Bra012082.1-P Field mustard cytosol 48.08 48.58
CDX77951 Canola cytosol 39.35 48.54
AT5G66560.1 Thale cress cytosol 47.78 48.35
Bra036858.1-P Field mustard cytosol 40.24 47.39
EER91175 Sorghum cytosol 40.83 43.74
EES14497 Sorghum cytosol 39.05 40.12
EES03716 Sorghum cytosol 35.8 37.17
EES11510 Sorghum cytosol 34.32 36.48
EES16593 Sorghum plastid 30.18 31.68
KXG39906 Sorghum cytosol 28.55 31.38
OQU92601 Sorghum plastid 29.88 30.56
KXG25806 Sorghum cytosol 29.44 30.43
EER98911 Sorghum cytosol 27.81 30.37
OQU93039 Sorghum cytosol 26.33 29.23
EER89339 Sorghum cytosol 27.37 29.13
EER91236 Sorghum cytosol 27.22 29.07
OQU79444 Sorghum cytosol 27.66 29.04
EES05363 Sorghum cytosol, nucleus, plastid 27.37 28.77
EES10995 Sorghum mitochondrion 27.51 28.44
OQU82741 Sorghum plastid 25.0 28.07
EES07014 Sorghum nucleus 30.77 26.91
KXG35200 Sorghum cytosol 21.89 25.61
GSMUA_Achr3P25690_001 Banana nucleus 44.82 25.38
KXG22914 Sorghum plastid 26.63 25.21
Protein Annotations
MapMan:35.1EntrezGene:8083968InterPro:BTB/POZ_domUniProt:C5WZ94ncoils:CoilEnsemblPlants:EER93390
ProteinID:EER93390ProteinID:EER93390.1GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000210
InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097PFscan:PS51649
PANTHER:PTHR32370PANTHER:PTHR32370:SF8InterPro:SKP1/BTB/POZ_sfSMART:SM00225EnsemblPlantsGene:SORBI_3001G077200SUPFAM:SSF54695
unigene:Sbi.9235UniParc:UPI0001A82CB2RefSeq:XP_002466392.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:5923250..5925983
Molecular Weight (calculated)
73281.8 Da
IEP (calculated)
5.635
GRAVY (calculated)
-0.395
Length
676 amino acids
Sequence
(BLAST)
001: MQGRRKNTRE MAREQPQPQP PPAAAAASSK GQAWFCTTGL PSDVVIEVGD MTFHLHKFPL MSRSKKLHDL ITNKESREAS RRGRGAEQEE DAGEIREEEL
101: DVVLEEDEEA DVHRIRLPEF PGGAEAFELA AKFCYGVKLD LTPATAAPLR CAAERLGMSD DHSEDNLVSR ADRFISQTVL RNPRDAIRAL KSCEGLLPLA
201: DDLGVVSRCV DAVAAKAAAS TPTALFGWPI ADDARAGDRQ RRKNGAAAGA TWFDDLAGLS LATFTRVIAA MKEHGVGPEV IEGALIAYAK RSIPGLSRTG
301: RHVGGGGGAA AAPPSSDGEQ KALLETVIAN LPEETIKSSA HTGTAVGATT ARVLFGLLRT ANILHASEAS RDMLERRIAA RLPDAAVDDL LIPSYSYLVE
401: TLYDVDCVER IVRYFLEGRD VADEGNEEEG SEAETPGREA SRRAMLAVGR LVDAYLGEIA TDANLKPDKF CDLAWALPDG ARVYDDGLYR AVDIYLKAHP
501: GLSEEEKEKV SGVVDGRKLT LEACTHAAQN ERLPLRTVVQ VLFFEQLQLR RAIAQTIMAN EGGAAGSGEE GGESDGGGTW RVAARGNQML RLDMDSMRNR
601: VHELERECTS MRKAIDKMDR RGGAPVDRGA PSVPADGRWG AIVTKRFGCK FPAQVCQSQQ RTVVARTRRP RIEQSP
Best Arabidopsis Sequence Match ( AT5G66560.1 )
(BLAST)
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.