CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 1
plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003297_P001	Maize	mitochondrion	82.11	87.18
Os04t0477000-01	Rice	cytosol, mitochondrion, plastid	65.44	68.26
EES05363	Sorghum	cytosol, nucleus, plastid	62.08	63.14
GSMUA_Achr10P...	Banana	cytosol	44.04	51.15
GSMUA_Achr8P16390_001	Banana	cytosol	39.3	49.23
CDY72257	Canola	cytosol	37.77	48.81
CDY72267	Canola	cytosol	37.77	48.81
VIT_01s0137g00820.t01	Wine grape	cytosol, golgi, nucleus	45.41	47.14
PGSC0003DMT400047866	Potato	cytosol	44.34	46.18
Solyc05g013570.2.1	Tomato	nucleus	42.97	46.07
AT1G67900.2	Thale cress	nucleus	43.88	45.48
KRG99441	Soybean	cytosol	43.73	45.25
KRH45579	Soybean	nucleus	43.43	44.8
KRH74516	Soybean	cytosol	42.05	44.72
KRH69640	Soybean	cytosol	43.43	44.65
Bra004064.1-P	Field mustard	cytosol	42.81	44.52
CDX83620	Canola	cytosol	36.09	43.14
CDY13635	Canola	cytosol	37.61	42.86
Bra025208.1-P	Field mustard	cytosol	37.61	42.86
AT3G26490.3	Thale cress	cytosol	37.16	41.33
EER91236	Sorghum	cytosol	33.33	34.44
OQU79444	Sorghum	cytosol	33.49	34.01
EER98911	Sorghum	cytosol	32.11	33.93
OQU93039	Sorghum	cytosol	31.5	33.83
EER89339	Sorghum	cytosol	31.35	32.28
KXG35200	Sorghum	cytosol	28.13	31.83
EES11510	Sorghum	cytosol	29.51	30.35
EES03716	Sorghum	cytosol	29.97	30.11
EER91175	Sorghum	cytosol	28.44	29.48
OQU91026	Sorghum	cytosol, nucleus, plastid	26.91	29.43
KXG25806	Sorghum	cytosol	28.29	28.29
EES14497	Sorghum	cytosol	28.29	28.12
KXG39906	Sorghum	cytosol	26.3	27.97
EES16593	Sorghum	plastid	27.22	27.64
EER93390	Sorghum	cytosol	28.44	27.51
OQU92601	Sorghum	plastid	27.37	27.08
EES07014	Sorghum	nucleus	29.66	25.1
OQU82741	Sorghum	plastid	22.02	23.92
KXG22914	Sorghum	plastid	24.01	21.99

Protein Annotations

EnsemblPlants:EES10995	EnsemblPlantsGene:SORBI_3006G120000	EntrezGene:8058712	Gene3D:3.30.710.10	InterPro:IPR027356	InterPro:NPH3_dom
InterPro:SKP1/BTB/POZ_sf	ncoils:Coil	PANTHER:PTHR32370	PANTHER:PTHR32370:SF9	PFAM:PF03000	PFscan:PS51649
ProteinID:EES10995	ProteinID:EES10995.1	RefSeq:XP_002446667.1	SEG:seg	SUPFAM:SSF54695	UniParc:UPI0001A86F52
UniProt:C5YAQ3	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:48681830..48684583

Molecular Weight (calculated)

69903.6 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.077

Length

654 amino acids

Sequence
(BLAST)

001: MKLMKLGTRP DSFFTSGPVR SVHTEVATDL QIQVDRSLFR LHKFPLLSKC QLLQALCADT DAVELRGFPG GADAFEACAK FCYGVAITVG AHNVVPLRCA
101: AGRLGMTEAA DRGNLAAKLD SFLASCLLRR WRDALAVLRS AGRCNALAAE CEDLGVTSRC VEAVAMLITT DPAAAAAAGG NAALAARACS SSSSSSSPWW
201: ARDVSDLRVD LFWRVMVAVK AAGTVKGRAV GDALRTYARR WLPTVSRSGY LVVEQTDIIS TADEGSFDFD VVARNSQLLV ERMVSLLPAE RNAAPCSFFL
301: KLLKAANVLG ASPASKAELT RRAALQLEDA NVSDLLIPSC ASETTLYDVD AVMAILEELA LRQAAAGVPE ASPPHARGHR RSRSAESSEF EGARRSTSAA
401: ASHGAMVRIG RLVDGFLMEV AKDPNLPLEK LIAIAEAVPD CARPEHDHLY RAVDTYLRVH PEMDKGSRKK LCRVLNCRKL SETASMHAAQ NELLPLRVVV
501: QVLFFENARA AAAALSGPGA NNGRVAGVAG GVRALLAKSR READGEEAAK NEQRLRRGIA AAAPGPDDGN DWSVEGLKRA ASRISTLRMK LEEDEDADAD
601: ADDEAFVHRA RAGLVRSASA RVRALCDCAS AIPAGKPKRM LSRLWPSSSC RDGH

Best Arabidopsis Sequence Match ( AT1G67900.4 )
(BLAST)

001: MKFMKLGSRP DTFYTSEDLR CVSSEVSSDF TIEVSGSRYL LHKFPLLSKC LRLQRMCSES PESIIQLPEF PGGVEAFELC AKFCYGITIT ISAYNIVAAR
101: CAAEYLQMSE EVEKGNLVYK LEVFFNSCIL NGWRDSIVTL QTTKAFPLWS EDLAITSRCI EAIASKVLSH PSKVSLSHSH SRRVRDDDMS SNRAAASSRG
201: WWAEDIAELG IDLYWRTMIA IKSGGKVPAS LIGDALRVYA SKWLPTLQRN RKVVKKKEDS DSDSDTDTSS KHRLLLESII SLLPAEKGAV SCSFLLKLLK
301: AANILNASTS SKMELARRVA LQLEEATVSD LLIPPMSYKS ELLYDVDIVA TILEQFMVQG QTSPPTSPLR GKKGMMDRRR RSRSAENIDL EFQESRRSSS
401: ASHSSKLKVA KLVDGYLQQI ARDVNLPLSK FVTLAESVPE FSRLDHDDLY RAIDIYLKAH KNLNKSERKR VCRVLDCKKL SMEACMHAAQ NEMLPLRVVV
501: QVLFYEQARA AAATNNGEKN TTELPSNIKA LLAAHNIDPS NPNAAAFSTT TSIAAPEDRW SVSGLKSPKS KLSGTLRSKL AEDEEVDERF MNGDGGRTPS
601: RFKAFCAIPG RPKKMFSKLL SINRNSSDKN C

Arabidopsis Description

BTB/POZ domain-containing protein At1g67900 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9V6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.