CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043271_P001	Maize	cytosol	94.16	94.75
Os01t0780600-01	Rice	plasma membrane	84.79	83.76
TraesCS3B01G349200.1	Wheat	cytosol	81.87	82.38
HORVU3Hr1G076740.1	Barley	cytosol	80.49	81.49
TraesCS3A01G317300.1	Wheat	cytosol	80.8	81.05
TraesCS3D01G314000.1	Wheat	cytosol	80.95	80.83
GSMUA_AchrUn_...	Banana	cytosol	38.25	58.59
VIT_08s0040g01800.t01	Wine grape	cytosol	53.3	55.61
Solyc09g007820.1.1	Tomato	cytosol	50.54	55.11
CDY10395	Canola	cytosol	45.93	55.06
VIT_13s0019g04420.t01	Wine grape	cytosol	52.23	54.93
AT5G03250.1	Thale cress	cytosol	49.46	54.39
PGSC0003DMT400093531	Potato	cytosol	44.85	54.28
CDX70320	Canola	cytosol	47.62	54.2
KRH21111	Soybean	cytosol	50.69	54.01
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	50.54	53.93
CDX80858	Canola	cytosol	48.39	53.57
Bra005737.1-P	Field mustard	cytosol	48.39	53.57
KRH32482	Soybean	cytosol	48.39	53.48
KRH19874	Soybean	cytosol	48.39	53.48
CDY11245	Canola	cytosol	48.39	52.68
EER91175	Sorghum	cytosol	50.54	52.14
AT5G13600.1	Thale cress	cytosol	46.54	51.27
KRH34860	Soybean	cytosol	48.08	50.65
CDX85639	Canola	cytosol	44.24	50.35
KRG91918	Soybean	cytosol	47.62	50.24
EES14497	Sorghum	cytosol	49.31	48.78
CDY72506	Canola	cytosol	9.37	48.03
Bra008815.1-P	Field mustard	cytosol	44.7	47.94
EES11510	Sorghum	cytosol	46.39	47.48
CDX69627	Canola	cytosol	44.24	47.45
CDY09812	Canola	cytosol	44.24	47.37
Bra023423.1-P	Field mustard	cytosol	37.17	43.84
OQU91026	Sorghum	cytosol, nucleus, plastid	35.64	38.8
EER93390	Sorghum	cytosol	37.17	35.8
OQU93039	Sorghum	cytosol	32.87	35.14
EER91236	Sorghum	cytosol	33.64	34.6
EES16593	Sorghum	plastid	33.49	33.85
EER98911	Sorghum	cytosol	31.03	32.63
OQU92601	Sorghum	plastid	33.03	32.53
OQU79444	Sorghum	cytosol	31.95	32.3
KXG39906	Sorghum	cytosol	29.95	31.71
KXG25806	Sorghum	cytosol	31.49	31.35
EES05363	Sorghum	cytosol, nucleus, plastid	30.72	31.1
EER89339	Sorghum	cytosol	30.26	31.02
EES10995	Sorghum	mitochondrion	30.11	29.97
EES07014	Sorghum	nucleus	34.41	28.98
KXG35200	Sorghum	cytosol	25.5	28.72
OQU82741	Sorghum	plastid	23.04	24.92
KXG22914	Sorghum	plastid	23.5	21.43

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8054710	InterPro:BTB/POZ_dom	UniProt:C5XLP7	ncoils:Coil
EnsemblPlants:EES03716	ProteinID:EES03716	ProteinID:EES03716.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3003G317000
SUPFAM:SSF54695	UniParc:UPI0001A85694	RefSeq:XP_002458596.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:64467394..64470264

Molecular Weight (calculated)

69850.7 Da

IEP (calculated)

5.022

GRAVY (calculated)

-0.076

Length

651 amino acids

Sequence
(BLAST)

001: MATMKLGSKP EIFVLEDLTW RSTTELESDV VVEVGEMSFY LHKFPLLSRS GVLQRMISEY QPPAGGGGGG MCTLQLDDIP GGAKAFELAA KFCYDVKIEL
101: NALNVVCLRC AAEYLRMTDD YAEGNLITQA ESFLADVLAN WKDSIKALET CEGVLPTAED LHLVSRCITA LASRACNSDA AAPLVRNAGV VVDKDALWNG
201: IRSGDTASAA AAAASGMDWW YEDVSFLSLP MFKRLIQAME AKGMRAESIA GAIMFYAGRF LPGLKRDTSF SNALASYGAD GAGGGGAGGM SSRNITPRAA
301: SVSAPSEGDQ RYFLEEIVAL LPTKKGVAST KFLLGMLRKA MLLHASPLCR ENLERRIGAQ LEDASLDDLL VPNLGYHVET LYDIDCVQRI LDYFMSSTDG
401: IGTGYTSPAL AEDGGGSLGI PQGGTPSSSL SPITMVAKLM DGFLAEVAPD TNLKLPKFQA LAAVVPDYAR PVDDGIYRAT DIYLKSHPWL SESEREQLCR
501: LLNCQKLSLE ACTHAAQNER LPLRVVVQVL FFEQLRLRTS IAGWFFVSDN AAGGDGARPH SGGGIVPKGA AAIAGSAQAE ADDSDVEGDA PEGKETMTDV
601: KARVSELEKE CKSMKQEIRR LGKPRRSWSL LPKKCGFGAK VQQAQTAMSG K

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.