Factsheet for TraesCS3A01G317300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G314000.1	Wheat	cytosol	99.08	98.62
TraesCS3B01G349200.1	Wheat	cytosol	97.53	97.84
HORVU3Hr1G076740.1	Barley	cytosol	93.07	93.93
Os01t0780600-01	Rice	plasma membrane	82.9	81.64
Zm00001d043271_P001	Maize	cytosol	80.89	81.14
EES03716	Sorghum	cytosol	81.05	80.8
GSMUA_AchrUn_...	Banana	cytosol	37.9	57.88
VIT_13s0019g04420.t01	Wine grape	cytosol	52.7	55.25
CDY10395	Canola	cytosol	46.23	55.25
KRH32482	Soybean	cytosol	49.15	54.16
KRH21111	Soybean	cytosol	50.85	54.01
VIT_08s0040g01800.t01	Wine grape	cytosol	51.93	54.01
CDX70320	Canola	cytosol	47.46	53.85
Solyc09g007820.1.1	Tomato	cytosol	49.46	53.77
Bra005737.1-P	Field mustard	cytosol	48.54	53.57
CDX80858	Canola	cytosol	48.54	53.57
AT5G03250.1	Thale cress	cytosol	48.84	53.55
KRH19874	Soybean	cytosol	48.54	53.48
PGSC0003DMT400093531	Potato	cytosol	43.91	52.97
CDY11245	Canola	cytosol	48.54	52.68
PGSC0003DMT400045367	Potato	cytosol, mitochondrion	49.0	52.13
CDY72506	Canola	cytosol	9.86	50.39
AT5G13600.1	Thale cress	cytosol	45.76	50.25
KRH34860	Soybean	cytosol	47.77	50.16
CDX85639	Canola	cytosol	43.76	49.65
KRG91918	Soybean	cytosol	47.15	49.59
TraesCS5A01G375500.3	Wheat	peroxisome	49.15	49.53
TraesCS7A01G309700.1	Wheat	cytosol	48.38	48.83
TraesCS5A01G042600.1	Wheat	cytosol	47.61	48.82
TraesCS2A01G526900.1	Wheat	cytosol	48.23	48.01
Bra008815.1-P	Field mustard	cytosol	44.38	47.45
CDY09812	Canola	cytosol	44.22	47.2
CDX69627	Canola	cytosol	43.91	46.95
Bra023423.1-P	Field mustard	cytosol	36.36	42.75
TraesCS5A01G403400.1	Wheat	cytosol	37.13	35.65
TraesCS5A01G379300.1	Wheat	cytosol, plastid	34.82	34.72
TraesCS4A01G048200.1	Wheat	cytosol	31.9	34.16
TraesCS4A01G236100.1	Wheat	cytosol	33.13	33.91
TraesCS7A01G184200.2	Wheat	plastid	34.51	33.53
TraesCS5A01G070700.1	Wheat	cytosol	31.74	33.12
TraesCS5A01G146300.1	Wheat	plastid	31.74	32.7
TraesCS6A01G085100.1	Wheat	cytosol	35.13	31.19
TraesCS6A01G208800.2	Wheat	cytosol	30.05	31.1
TraesCS4A01G049300.1	Wheat	cytosol	28.97	30.92
TraesCS7A01G149100.1	Wheat	cytosol	31.12	30.84
TraesCS5A01G223800.1	Wheat	cytosol	30.51	29.86
TraesCS5A01G171100.1	Wheat	cytosol	26.04	29.44
TraesCS4A01G192900.1	Wheat	cytosol	23.73	27.4

Protein Annotations

EnsemblPlants:TraesCS3A01G317300.1	EnsemblPlantsGene:TraesCS3A01G317300	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	InterPro:SKP1/BTB/POZ_sf	ncoils:Coil
PANTHER:PTHR32370	PANTHER:PTHR32370:SF41	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
SEG:seg	SMART:SM00225	SUPFAM:SSF54695	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3A:+:557947493..557950279

Molecular Weight (calculated)

69927.9 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.005

Length

649 amino acids

Sequence
(BLAST)

001: MVTMKLGSKP DIFVLEGLTW RCMTELESDV VVEVGDMSFY LHKFPLLSRS GVLQRLISEY QPPSDGGGMC TLQLDDIPGG AKAFELAARF CYDVKIELNA
101: LNVVCLRCAA EYLGMTDDYA EGNLIAQAES FLADVLANWK DSVRALETCE GVLPAAEDLQ IVPRCITALA SKACASDAAA WSTHGAKGAS LDRDALWNGI
201: GSGDTPRGAA AAAAASAMDW WYEDVSLLSL PMFKRLIQAM EAKSMRAESI AGAIMFYAGR LLPGLNRSAS FSNASFGGDY GGIAGSRSAT PRSATASLSG
301: TSDGDQRYFL EEIIALLPTK KGVTSTKFLL GLLRTAMLLH ASPLCRENLE RRIGAQLEDA SLEDLLVPNL GYTVDTLYDI DCVQRILDYF MSSMDGLGTG
401: YTSPALAEDG SQLGLPHAAT PPAVAPIAMV AKLMDGYLAE VAPDTNLKLA KFQALAAVVP DYARTVDDGI YRAMDIYLKS HHWLSESERE QLCRLMNCQK
501: LSLEACTHAA QNERLPLRVV VQVLFFEQLR LRTSIAGWFF VSDNAATATD GAHLHHPGNA GAIVPKGSAV VDSGAAGQDE EVVMVTPEGK GSETMSNVKA
601: RVSELEKECV SMKQEIRRLG KPRRSWSILT RKCGFGAKVQ QAQPAMSGK

Best Arabidopsis Sequence Match ( AT5G03250.1 )
(BLAST)

001: MAFMRLGSKS EAFHREGQTW LCTTGLVSDV TIEVGDMKFH LHKFPLLSRS GLLERLIEES STDDGSGCVL SLDEIPGGGK TFELVTKFCY GVKIELTAFN
101: VVSLRCAAEY LEMTDNYGEG NLVGMTETFL NEVFGNWTDS IKALQTCEEV IDYAEDLHII SRCVDSLAVK ACADPSLFNW PVGGGKNATS GQNTEDESHL
201: WNGISASGKM LQHTGEDWWF DDASFLSLPL FKRLITAIEA RGMKLENIAM AVMYYTRKHV PLMNRQVNMD EQVIETPNPS EEDQKTCLEE IVGLLPSKKG
301: VNPTKFLLRL LQTAMVLHAS QSSRENLERR IGNQLDQAAL VDLLIPNMGY SETLYDVECV LRMIEQFVSS TEQAGIVPSP CIIEEGHLVK DGADLLTPTT
401: LVATLVDGYL AEVAPDVNLK LAKFEAIAAA IPDYARPLDD GVYHAIDVYL KAHPWITDSE REHICRLMNC QKLSLEASTH AAQNERLPLR VIVQVLFFEQ
501: LRLRTSVSGW FFVSENLDNP DNQHGANGGL LKPRGENVRE RVSELEKECM NMKQELHKLV RTKRSWKNFT RKLNFKKKSE CCKPKDQATP AI

Arabidopsis Description

BTB/POZ domain-containing protein At5g03250 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYW0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.