Factsheet for AT5G13600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85639	Canola	cytosol	78.17	80.77
Bra008815.1-P	Field mustard	cytosol	81.22	79.08
CDX69627	Canola	cytosol	80.88	78.75
CDY09812	Canola	cytosol	80.71	78.45
Bra023423.1-P	Field mustard	cytosol	69.54	74.46
VIT_13s0019g04420.t01	Wine grape	cytosol	59.39	56.7
AT5G03250.1	Thale cress	cytosol	54.82	54.73
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	45.35	53.07
GSMUA_AchrUn_...	Banana	cytosol	38.07	52.94
KRG91918	Soybean	cytosol	52.96	50.73
KRH34860	Soybean	cytosol	52.96	50.65
GSMUA_Achr2P02890_001	Banana	cytosol	48.22	50.53
Zm00001d043271_P001	Maize	cytosol	51.1	46.68
EES03716	Sorghum	cytosol	51.27	46.54
TraesCS3B01G349200.1	Wheat	cytosol	50.93	46.52
HORVU3Hr1G076740.1	Barley	cytosol	50.59	46.5
Os01t0780600-01	Rice	plasma membrane	51.61	46.28
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	51.95	46.17
TraesCS3A01G317300.1	Wheat	cytosol	50.25	45.76
TraesCS3D01G314000.1	Wheat	cytosol	50.42	45.71
Os04t0636500-01	Rice	plasma membrane	48.9	44.88
Zm00001d002146_P001	Maize	cytosol	45.52	43.39
EES11510	Sorghum	cytosol	45.52	42.3
TraesCS2B01G557300.2	Wheat	cytosol	45.85	41.89
TraesCS2D01G529600.1	Wheat	cytosol	45.69	41.54
TraesCS2A01G526900.1	Wheat	cytosol	45.35	41.1
AT3G50840.1	Thale cress	cytosol	37.06	38.49
AT3G44820.1	Thale cress	cytosol	40.61	36.87
AT5G66560.1	Thale cress	cytosol	40.78	36.08
AT2G23050.1	Thale cress	cytosol	28.93	35.55
AT4G31820.1	Thale cress	cytosol	31.98	33.1
AT5G48800.1	Thale cress	cytosol	34.35	33.06
AT3G08660.1	Thale cress	plastid	31.64	32.13
AT5G67440.1	Thale cress	cytosol	31.47	32.12
AT5G67385.1	Thale cress	cytosol	32.83	32.12
AT4G37590.1	Thale cress	cytosol	30.8	31.38
AT1G67900.2	Thale cress	nucleus	33.5	31.38
AT3G49970.2	Thale cress	extracellular	26.9	30.87
AT1G03010.1	Thale cress	cytosol	32.83	30.6
AT2G30520.1	Thale cress	cytosol	30.63	30.52
AT3G08570.1	Thale cress	plastid	31.47	30.15
AT5G64330.1	Thale cress	cytosol	37.73	29.89
AT2G47860.3	Thale cress	plastid	33.16	29.79
AT2G14820.2	Thale cress	cytosol	31.81	29.65
AT3G26490.3	Thale cress	cytosol	29.27	29.42
AT5G10250.2	Thale cress	cytosol	30.96	29.42
AT5G47800.2	Thale cress	cytosol	26.9	23.66

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:831204	UniProt:A0A178URB0	ProteinID:AED91916.1	ArrayExpress:AT5G13600
EnsemblPlantsGene:AT5G13600	RefSeq:AT5G13600	TAIR:AT5G13600	RefSeq:AT5G13600-TAIR-G	EnsemblPlants:AT5G13600.1	TAIR:AT5G13600.1
Unigene:At.54836	ProteinID:BAB08686.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016567	GO:GO:0019538	InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom
RefSeq:NP_196864.1	ProteinID:OAO95867.1	PFAM:PF00651	PFAM:PF03000	PO:PO:0000084	PO:PO:0007611
PO:PO:0007616	PO:PO:0009025	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF46	UniProt:Q9FNB3	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00000A6979	:	:	:

Description

Putative BTB/POZ domain-containing protein At5g13600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNB3]

Coordinates

chr5:+:4380432..4382497

Molecular Weight (calculated)

66503.8 Da

IEP (calculated)

5.425

GRAVY (calculated)

-0.241

Length

591 amino acids

Sequence
(BLAST)

001: MASLKLGSKS EVFHLSGHTW LCKTGLKPDV MIQVVDESFH LHKFPLLSRS GYLETLFSKA SETTCVAQLH DIPGGPETFL LVAKFCYGVR IEVTPENAVS
101: LRCAAEYLQM SENYGDANLI YLTESFLNDH VFVNWEDSIK ALEKSCEPKV LPLAEELHIV SRCIGSLAMK ACAEDNTSFF NWPISLPEGT TTTTIYWNGI
201: QTKATSENWW FNDVSSFLDL PMYKRFIKTV ESRGVNAGII AASVTHYAKR NLPLLGCSRK SGSPSEEGTN YGDDMYYSHE EQRSLLEEIV ELLPGKKCVT
301: STKFLLRLLR TSMVLHASQV TQETLEKRIG MQLDEAALED LLIPNMKYSG ETLYDTDSVQ RILDHFMLTF DSSIVEEKQM MGDSHPLKSI TKVASLIDGY
401: LAEVASDENL KLSKFQALGA LIPEDVRPMD DGIYRAIDIY IKAHPWLTES EREQLCLLMN CQKLSLEACT HAAQNERLPL RVIVQVLFFE QMRLRTSIAG
501: WLFGSEENND TSGALEGNKN TNANMVMHGM RERVFELEKE CMSMKQDLDK LVKTKEGRNF FSKIFGSRSK TKTSPCGKGG EDALVIPETK N

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.