Factsheet for AT1G30440.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02293	Canola	cytosol, mitochondrion, nucleus	93.23	94.08
CDY09586	Canola	cytosol	92.63	93.9
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	93.08	93.65
CDY27653	Canola	cytosol	77.44	83.33
Bra025440.1-P	Field mustard	cytosol	70.38	81.68
CDX99692	Canola	cytosol, mitochondrion, nucleus	78.8	81.24
Solyc02g021640.2.1	Tomato	nucleus	73.68	77.9
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	73.38	77.58
VIT_10s0003g04490.t01	Wine grape	cytosol	73.68	77.53
KRH37734	Soybean	cytosol	73.23	75.74
KRH12771	Soybean	cytosol	72.78	75.27
EER91175	Sorghum	cytosol	64.36	67.83
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	64.06	67.73
GSMUA_Achr5P02440_001	Banana	cytosol	57.44	66.67
GSMUA_Achr5P00550_001	Banana	cytosol	62.41	65.98
TraesCS5D01G385100.1	Wheat	plastid	62.86	65.72
HORVU5Hr1G093120.2	Barley	cytosol	62.41	65.46
GSMUA_Achr6P30010_001	Banana	cytosol	53.38	64.78
GSMUA_Achr4P31620_001	Banana	cytosol	58.05	64.66
GSMUA_Achr9P26110_001	Banana	cytosol	57.89	63.53
Os12t0613250-00	Rice	plasma membrane	61.65	63.08
TraesCS5A01G042600.1	Wheat	cytosol	59.55	62.56
TraesCS5A01G375500.3	Wheat	peroxisome	60.45	62.42
TraesCS5D01G051100.1	Wheat	cytosol	59.25	62.34
TraesCS5B01G377600.1	Wheat	cytosol	62.86	61.65
Os08t0130600-01	Rice	plasma membrane	59.25	61.47
HORVU7Hr1G073650.1	Barley	cytosol	57.89	60.06
TraesCS7D01G306400.1	Wheat	cytosol	58.05	60.03
TraesCS5B01G046200.2	Wheat	mitochondrion	57.59	59.66
TraesCS7A01G309700.1	Wheat	cytosol	57.59	59.56
TraesCS7B01G209700.1	Wheat	cytosol	57.59	59.56
EES14497	Sorghum	cytosol	58.05	58.66
Zm00001d035208_P002	Maize	cytosol	57.29	57.47
AT5G03250.1	Thale cress	cytosol	48.72	54.73
AT5G13600.1	Thale cress	cytosol	46.17	51.95
HORVU5Hr1G010370.2	Barley	plastid	59.4	50.06
AT3G50840.1	Thale cress	cytosol	37.74	44.11
AT5G66560.1	Thale cress	cytosol	43.61	43.41
AT3G44820.1	Thale cress	cytosol	42.26	43.16
AT5G48800.1	Thale cress	cytosol	34.74	37.62
AT2G23050.1	Thale cress	cytosol	26.62	36.8
AT4G37590.1	Thale cress	cytosol	30.53	35.0
AT5G67385.1	Thale cress	cytosol	31.73	34.93
AT5G67440.1	Thale cress	cytosol	29.92	34.37
AT5G64330.1	Thale cress	cytosol	38.5	34.32
AT3G49970.2	Thale cress	extracellular	26.47	34.17
AT3G08660.1	Thale cress	plastid	29.17	33.33
AT1G03010.1	Thale cress	cytosol	31.58	33.12
AT4G31820.1	Thale cress	cytosol	28.12	32.75
AT3G08570.1	Thale cress	plastid	30.38	32.74
AT2G30520.1	Thale cress	cytosol	28.87	32.38
AT1G67900.2	Thale cress	nucleus	30.53	32.17
AT2G47860.3	Thale cress	plastid	30.38	30.7
AT3G26490.3	Thale cress	cytosol	27.07	30.61
AT2G14820.2	Thale cress	cytosol	29.02	30.44
AT5G10250.2	Thale cress	cytosol	27.97	29.9
AT5G47800.2	Thale cress	cytosol	26.32	26.04
Os12t0613300-02	Rice	nucleus	1.2	2.69

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:839923	UniProt:A0A178WNN1	ProteinID:AAF19742.1	ProteinID:AEE31216.1
ArrayExpress:AT1G30440	EnsemblPlantsGene:AT1G30440	RefSeq:AT1G30440	TAIR:AT1G30440	RefSeq:AT1G30440-TAIR-G	EnsemblPlants:AT1G30440.1
TAIR:AT1G30440.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016567	GO:GO:0019538	InterPro:IPR000210	InterPro:IPR027356
InterPro:NPH3_dom	RefSeq:NP_174332.1	ProteinID:OAP19879.1	PFAM:PF00651	PFAM:PF03000	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	UniProt:Q9S9Q9	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695
UniParc:UPI0000162F22	SEG:seg	:	:	:	:

Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]

Coordinates

chr1:+:10758743..10762429

Molecular Weight (calculated)

73414.2 Da

IEP (calculated)

6.779

GRAVY (calculated)

-0.317

Length

665 amino acids

Sequence
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.