Factsheet for GSMUA_Achr5P02440_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P31620_001	Banana	cytosol	77.84	74.71
GSMUA_Achr6P30010_001	Banana	cytosol	68.24	71.35
GSMUA_Achr9P26110_001	Banana	cytosol	75.39	71.29
VIT_10s0003g04490.t01	Wine grape	cytosol	72.95	66.14
Zm00001d033240_P002	Maize	cytosol, mitochondrion, nucleus	70.33	64.07
PGSC0003DMT400008211	Potato	cytosol, mitochondrion	70.33	64.07
Solyc02g021640.2.1	Tomato	nucleus	70.33	64.07
EER91175	Sorghum	cytosol	70.51	64.03
KRH12771	Soybean	cytosol	71.2	63.45
KRH37734	Soybean	cytosol	71.2	63.45
GSMUA_Achr5P00550_001	Banana	cytosol	68.94	62.8
HORVU5Hr1G093120.2	Barley	cytosol	68.76	62.15
TraesCS5D01G385100.1	Wheat	plastid	68.76	61.95
TraesCS5A01G375500.3	Wheat	peroxisome	66.14	58.85
TraesCS5B01G377600.1	Wheat	cytosol	69.11	58.41
TraesCS5A01G042600.1	Wheat	cytosol	64.22	58.14
Os12t0613250-00	Rice	plasma membrane	65.79	58.0
TraesCS5D01G051100.1	Wheat	cytosol	63.87	57.91
CDY02293	Canola	cytosol, mitochondrion, nucleus	66.14	57.51
Bra032391.1-P	Field mustard	cytosol, mitochondrion, nucleus	66.32	57.49
CDY09586	Canola	cytosol	65.79	57.47
AT1G30440.1	Thale cress	cytosol, mitochondrion, nucleus	66.67	57.44
CDX90249	Canola	cytosol, mitochondrion, nucleus	63.0	57.21
CDY27653	Canola	cytosol	60.21	55.83
TraesCS5B01G046200.2	Wheat	mitochondrion	62.13	55.45
GSMUA_AchrUn_...	Banana	cytosol	40.66	54.82
CDX99692	Canola	cytosol, mitochondrion, nucleus	61.43	54.57
GSMUA_Achr9P19480_001	Banana	extracellular, plasma membrane	47.12	53.47
GSMUA_Achr2P02890_001	Banana	cytosol	52.18	53.01
Bra025440.1-P	Field mustard	cytosol	52.36	52.36
HORVU5Hr1G010370.2	Barley	plastid	65.1	47.27
GSMUA_Achr4P01950_001	Banana	cytosol	31.06	43.63
GSMUA_Achr9P26440_001	Banana	cytosol	44.15	43.47
GSMUA_Achr8P04840_001	Banana	cytosol	44.33	43.2
GSMUA_Achr3P20380_001	Banana	cytosol	41.36	41.22
GSMUA_Achr10P...	Banana	cytosol	38.57	39.96
GSMUA_Achr6P27970_001	Banana	cytosol	34.03	37.72
GSMUA_Achr4P10900_001	Banana	cytosol	36.3	37.34
GSMUA_Achr5P01710_001	Banana	cytosol	37.52	37.01
GSMUA_Achr7P21950_001	Banana	plastid	35.78	36.41
GSMUA_Achr3P04740_001	Banana	cytosol	36.47	35.42
GSMUA_Achr8P30170_001	Banana	plastid	34.38	35.3
GSMUA_Achr10P...	Banana	cytosol	34.9	35.15
GSMUA_Achr10P...	Banana	cytosol	34.21	34.81
GSMUA_Achr8P16390_001	Banana	cytosol	31.59	34.67
GSMUA_Achr1P21440_001	Banana	cytosol	36.13	34.05
GSMUA_Achr1P11260_001	Banana	plastid	34.03	34.03
GSMUA_Achr7P26250_001	Banana	cytosol	35.95	33.01
GSMUA_Achr7P26300_001	Banana	cytosol	33.68	32.6
GSMUA_Achr2P13430_001	Banana	cytosol	37.52	32.04
GSMUA_Achr11P...	Banana	cytosol, plastid	31.94	31.61
GSMUA_Achr3P12020_001	Banana	cytosol	29.32	30.77
GSMUA_Achr5P29690_001	Banana	cytosol, plastid	31.94	30.5
GSMUA_Achr3P14590_001	Banana	cytosol	29.14	29.14
CDY12056	Canola	plasma membrane	63.35	22.49
GSMUA_Achr3P25690_001	Banana	nucleus	40.31	19.35
Os12t0613300-02	Rice	nucleus	1.4	2.69

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr5G02440_001	EnsemblPlants:GSMUA_Achr5P02440_001	EnsemblPlants:GSMUA_Achr5T02440_001	InterPro:IPR000210	InterPro:IPR027356
UniProt:M0SV23	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51649
PANTHER:PTHR32370	PANTHER:PTHR32370:SF12	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	UniParc:UPI000295E1BF	SEG:seg

Description

BTB/POZ domain-containing protein At1g30440 [Source:GMGC_GENE;Acc:GSMUA_Achr5G02440_001]

Coordinates

chr5:-:1544490..1548178

Molecular Weight (calculated)

63920.2 Da

IEP (calculated)

6.880

GRAVY (calculated)

-0.223

Length

573 amino acids

Sequence
(BLAST)

001: MACMKLGSKP DAFQQQGQAW FCTTGLPSDV TVEVGEISFH LHKFPLLSKS GLLEKLMKEK SDEEEDTLIK LHDVTGGART FELVAKFCYG IKLELTSSNV
101: VYLRCASEHL QMTEEIAEGN LIAQTEIFFN QVVLHSWKDS IKALQTCDDL LPHAENLQII KRCVDSLAVK ASRPRNCSSD WWYEDVSSLS FPLYKRLISV
201: MKSRGIRQEI IAGSLILYAK QYLPGLNRRP SLAQGNLTAA PSEQEQRHLL EEIDSLLPLQ KGAASTKILI GLLRTAIILQ ASPSCISNLE RRVGMQLDQA
301: DLEDLLFPTF EFSMEALYNV DRVQRMLDHF IATDQATSTA GTSSPGSVND EQLIGSPSLV PLTAVAKLID GYLAEVAPDI NLKMPKFQKL AAAVPDYARP
401: LDDGLYRALD IYLKAHPWLS ESEREQLCRL MDCQKLSLEA CTHAAQNERL PLRVVVQVLF FEQLQLRTSV AGSGGWMTAV RENKDLKVGM DNMRLRVSEL
501: EKECTSMKQE IKKLGQGRSG WSSVPKKFGS KIKLQLCSAQ EDSVSAQQKT KSGKIDKLQA IITKQKHQLS ADD

Best Arabidopsis Sequence Match ( AT1G30440.1 )
(BLAST)

001: MACMKLGSKS DAFQRQGQAW FCTTGLPSDI VVEVGEMSFH LHKFPLLSRS GVMERRIAEA SKEGDDKCLI EISDLPGGDK TFELVAKFCY GVKLELTASN
101: VVYLRCAAEH LEMTEEHGEG NLISQTETFF NQVVLKSWKD SIKALHSCDE VLEYADELNI TKKCIESLAM RASTDPNLFG WPVVEHGGPM QSPGGSVLWN
201: GISTGARPKH TSSDWWYEDA SMLSFPLFKR LITVMESRGI REDIIAGSLT YYTRKHLPGL KRRRGGPESS GRFSTPLGSG NVLSEEEQKN LLEEIQELLR
301: MQKGLVPTKF FVDMLRIAKI LKASPDCIAN LEKRIGMQLD QAALEDLVMP SFSHTMETLY DVDSVQRILD HFLGTDQIMP GGVGSPCSSV DDGNLIGSPQ
401: SITPMTAVAK LIDGYLAEVA PDVNLKLPKF QALAASIPEY ARLLDDGLYR AIDIYLKHHP WLAETERENL CRLLDCQKLS LEACTHAAQN ERLPLRIIVQ
501: VLFFEQLQLR TSVAGCFLVS DNLDGGSRQL RSGGYVGGPN EGGGGGGGWA TAVRENQVLK VGMDSMRMRV CELEKECSNM RQEIEKLGKT TKGGGSASNG
601: VGSKTWENVS KKLGFGFKLK SHQMCSAQEG SVSKSNNENV KIEKLKDVKE RRGKHKKASS ISSER

Arabidopsis Description

BTB/POZ domain-containing protein At1g30440 [Source:UniProtKB/Swiss-Prot;Acc:Q9S9Q9]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.