Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr4P10900_001 | Banana | cytosol | 68.75 | 77.02 |
GSMUA_Achr10P... | Banana | cytosol | 59.62 | 65.38 |
VIT_07s0129g00250.t01 | Wine grape | cytosol | 59.46 | 58.98 |
GSMUA_Achr5P01710_001 | Banana | cytosol | 54.01 | 58.0 |
Os03t0205700-01 | Rice | cytosol | 56.09 | 57.85 |
TraesCS4B01G256600.1 | Wheat | cytosol | 55.93 | 57.69 |
TraesCS4D01G256700.1 | Wheat | cytosol | 55.77 | 57.43 |
TraesCS4A01G048200.1 | Wheat | cytosol | 55.61 | 57.26 |
HORVU4Hr1G069760.10 | Barley | cytosol | 56.09 | 57.19 |
OQU93039 | Sorghum | cytosol | 55.29 | 56.65 |
VIT_03s0091g00680.t01 | Wine grape | cytosol | 56.57 | 56.57 |
AT2G23050.1 | Thale cress | cytosol | 42.95 | 55.72 |
GSMUA_Achr4P01950_001 | Banana | cytosol | 36.38 | 55.64 |
KRH58082 | Soybean | cytosol | 55.77 | 55.41 |
KRH35678 | Soybean | cytosol | 55.29 | 55.29 |
KRH04439 | Soybean | cytosol | 55.61 | 55.17 |
CDX81314 | Canola | cytosol | 46.31 | 54.94 |
KRH58085 | Soybean | cytosol | 54.81 | 54.81 |
KRH04442 | Soybean | cytosol | 55.29 | 54.76 |
CDX89539 | Canola | cytosol | 41.99 | 54.7 |
Bra032187.1-P | Field mustard | cytosol | 41.99 | 54.7 |
Bra037846.1-P | Field mustard | cytosol | 45.99 | 54.56 |
PGSC0003DMT400013928 | Potato | cytosol | 53.21 | 54.43 |
CDY38923 | Canola | cytosol | 41.51 | 54.41 |
CDX81462 | Canola | cytosol | 52.56 | 54.39 |
CDY18660 | Canola | cytosol | 45.99 | 54.36 |
Solyc10g049660.1.1 | Tomato | cytosol | 53.21 | 54.34 |
Zm00001d048138_P007 | Maize | cytosol | 54.33 | 54.33 |
CDY37223 | Canola | cytosol | 52.4 | 54.23 |
CDY50369 | Canola | cytosol | 43.75 | 53.22 |
PGSC0003DMT400066161 | Potato | cytosol | 53.37 | 53.19 |
Solyc02g092480.2.1 | Tomato | cytosol | 53.37 | 53.03 |
Bra039820.1-P | Field mustard | cytosol | 53.21 | 52.95 |
Solyc01g107180.2.1 | Tomato | cytosol | 53.04 | 52.88 |
PGSC0003DMT400064174 | Potato | cytosol | 53.21 | 52.87 |
KRG91101 | Soybean | mitochondrion | 52.88 | 52.38 |
Bra012166.1-P | Field mustard | cytosol | 46.96 | 52.04 |
CDY69095 | Canola | cytosol | 46.63 | 51.87 |
PGSC0003DMT400038537 | Potato | cytosol | 52.08 | 51.83 |
GSMUA_Achr2P13430_001 | Banana | cytosol | 55.29 | 51.42 |
CDY12846 | Canola | cytosol | 46.47 | 51.33 |
Solyc03g044090.2.1 | Tomato | cytosol | 51.6 | 51.11 |
AT2G14820.2 | Thale cress | cytosol | 51.76 | 50.95 |
AT5G67440.1 | Thale cress | cytosol | 46.79 | 50.43 |
CDY22422 | Canola | cytosol | 46.15 | 50.09 |
CDX72639 | Canola | cytosol | 46.31 | 50.0 |
Bra010603.1-P | Field mustard | cytosol | 45.99 | 49.91 |
CDY44035 | Canola | cytosol | 45.99 | 49.91 |
CDY29566 | Canola | cytosol | 46.15 | 49.83 |
Bra017837.1-P | Field mustard | cytosol | 45.99 | 49.65 |
AT4G37590.1 | Thale cress | cytosol | 45.67 | 49.14 |
GSMUA_Achr3P04740_001 | Banana | cytosol | 44.87 | 47.46 |
Zm00001d028075_P010 | Maize | endoplasmic reticulum | 53.85 | 41.64 |
GSMUA_Achr10P... | Banana | cytosol | 36.38 | 40.32 |
GSMUA_Achr8P16390_001 | Banana | cytosol | 31.73 | 37.93 |
GSMUA_Achr6P30010_001 | Banana | cytosol | 33.01 | 37.59 |
GSMUA_Achr3P20380_001 | Banana | cytosol | 34.29 | 37.22 |
GSMUA_Achr9P19480_001 | Banana | extracellular, plasma membrane | 29.97 | 37.03 |
GSMUA_Achr9P26110_001 | Banana | cytosol | 35.42 | 36.47 |
GSMUA_Achr2P02890_001 | Banana | cytosol | 32.85 | 36.35 |
GSMUA_Achr3P12020_001 | Banana | cytosol | 31.73 | 36.26 |
GSMUA_Achr3P14590_001 | Banana | cytosol | 33.01 | 35.95 |
GSMUA_Achr5P02440_001 | Banana | cytosol | 33.01 | 35.95 |
GSMUA_Achr5P00550_001 | Banana | cytosol | 35.26 | 34.98 |
GSMUA_Achr4P31620_001 | Banana | cytosol | 33.33 | 34.84 |
GSMUA_AchrUn_... | Banana | cytosol | 23.24 | 34.12 |
GSMUA_Achr9P26440_001 | Banana | cytosol | 30.77 | 32.99 |
GSMUA_Achr6P27970_001 | Banana | cytosol | 26.92 | 32.5 |
GSMUA_Achr8P04840_001 | Banana | cytosol | 29.97 | 31.8 |
GSMUA_Achr10P... | Banana | cytosol | 27.88 | 31.46 |
GSMUA_Achr8P30170_001 | Banana | plastid | 27.88 | 31.18 |
GSMUA_Achr7P21950_001 | Banana | plastid | 28.04 | 31.08 |
GSMUA_Achr7P26300_001 | Banana | cytosol | 29.33 | 30.91 |
GSMUA_Achr1P21440_001 | Banana | cytosol | 29.97 | 30.76 |
GSMUA_Achr1P11260_001 | Banana | plastid | 26.76 | 29.14 |
GSMUA_Achr5P29690_001 | Banana | cytosol, plastid | 25.96 | 27.0 |
GSMUA_Achr11P... | Banana | cytosol, plastid | 24.52 | 26.42 |
GSMUA_Achr3P25690_001 | Banana | nucleus | 27.08 | 14.15 |
Protein Annotations
EnsemblPlants:GSMUA_Achr7P26250_001 | EnsemblPlants:GSMUA_Achr7T26250_001 | EnsemblPlantsGene:GSMUA_Achr7G26250_001 | Gene3D:3.30.710.10 | GO:GO:0008150 | GO:GO:0009605 |
GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009958 | InterPro:BTB/POZ_NPY2 | InterPro:IPR027356 | InterPro:NPH3_dom |
InterPro:SKP1/BTB/POZ_sf | ncoils:Coil | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF4 | PFAM:PF03000 | PFscan:PS51649 |
SEG:seg | SUPFAM:SSF54695 | UniParc:UPI0002950C4C | UniProt:M0TKW1 | MapMan:35.1 | : |
Description
BTBN4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G26250_001]
Coordinates
chr7:+:27596666..27600273
Molecular Weight (calculated)
68743.7 Da
IEP (calculated)
8.225
GRAVY (calculated)
-0.261
Length
624 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFMKLGSKP DSFQSDGKDI RFVATDLAAD IIIRVGNVKF HLHKVITLFQ SHNRCRTLSC SCPLYPYCNF ASLSFPLLSK SFRLQKLITI TNNEKTDEIC
101: ISDIPGGAAA FEICAKFCYG MTVTLNAHNV TTARCAAEYL QMHETVEKGN LIYKIEVFLR TSILRSWKDS IIVLQTTRSL LPWSEDLKLI DHCIESIASK
201: ASTDSSKVEW KENSVPKDWW VEDLCELEIG FFKKIIMAIK VKGRVSSEVI GEALKAYTYR RLSSLGKEKG GDPNKNRSLL ETIILLLPSE KGSVSCCFLL
301: KLLRAGSLLD CGECSKRELV KRIGRQLEDA SVPGLLIPST SGENTIYDVD MVLNIVEEFI MQDNSDVQLS TNEELHELNA PALASRISKI TVAKLVDDYL
401: IEIAKDPNLP LSKFIDLAEI LPSDSRPVHD GLYHAIDTYL KEHPGLGKSE KKKLCGLMNC KKLSGDVCAH AMQNERLPLR LVVQILYFEQ MRASAATTSR
501: AESGNSYGSS RSAITTNTED ECDGVPNAED GKARKFTKLS EGGKGCEWSS GGNNENRSNG QGKSGNSQVK GVVMPKKMLG KFLLSSKGQA GGSSSSSDTS
601: GSPNSAKQGE PKLTPSRNIR YTVL
101: ISDIPGGAAA FEICAKFCYG MTVTLNAHNV TTARCAAEYL QMHETVEKGN LIYKIEVFLR TSILRSWKDS IIVLQTTRSL LPWSEDLKLI DHCIESIASK
201: ASTDSSKVEW KENSVPKDWW VEDLCELEIG FFKKIIMAIK VKGRVSSEVI GEALKAYTYR RLSSLGKEKG GDPNKNRSLL ETIILLLPSE KGSVSCCFLL
301: KLLRAGSLLD CGECSKRELV KRIGRQLEDA SVPGLLIPST SGENTIYDVD MVLNIVEEFI MQDNSDVQLS TNEELHELNA PALASRISKI TVAKLVDDYL
401: IEIAKDPNLP LSKFIDLAEI LPSDSRPVHD GLYHAIDTYL KEHPGLGKSE KKKLCGLMNC KKLSGDVCAH AMQNERLPLR LVVQILYFEQ MRASAATTSR
501: AESGNSYGSS RSAITTNTED ECDGVPNAED GKARKFTKLS EGGKGCEWSS GGNNENRSNG QGKSGNSQVK GVVMPKKMLG KFLLSSKGQA GGSSSSSDTS
601: GSPNSAKQGE PKLTPSRNIR YTVL
001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS
Arabidopsis Description
NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.