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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44035 Canola cytosol 95.3 95.3
CDX72639 Canola cytosol 88.87 88.41
CDY29566 Canola cytosol 88.17 87.72
AT4G37590.1 Thale cress cytosol 86.96 86.21
CDY38923 Canola cytosol 56.17 67.86
CDX89539 Canola cytosol 56.0 67.22
CDX81314 Canola cytosol 52.52 57.41
CDY18660 Canola cytosol 52.52 57.2
VIT_07s0129g00250.t01 Wine grape cytosol 61.39 56.12
PGSC0003DMT400064174 Potato cytosol 60.17 55.1
Solyc02g092480.2.1 Tomato cytosol 60.0 54.94
CDY69095 Canola cytosol 53.57 54.9
KRH58085 Soybean cytosol 59.13 54.49
KRH04439 Soybean cytosol 59.3 54.21
CDY12846 Canola cytosol 52.87 53.81
KRH58082 Soybean cytosol 58.26 53.34
PGSC0003DMT400038537 Potato cytosol 56.87 52.15
KRH04442 Soybean cytosol 56.7 51.75
GSMUA_Achr4P10900_001 Banana cytosol 49.39 50.99
Solyc03g044090.2.1 Tomato cytosol 55.83 50.95
GSMUA_Achr5P01710_001 Banana cytosol 51.48 50.95
Os03t0205700-01 Rice cytosol 51.3 48.76
Os12t0583500-01 Rice cytosol, plasma membrane 54.09 48.75
EER91236 Sorghum cytosol 53.57 48.66
TraesCS5B01G076500.1 Wheat cytosol 52.52 48.63
OQU93039 Sorghum cytosol 51.48 48.6
TraesCS5A01G070700.1 Wheat cytosol 52.52 48.55
TraesCS5D01G082800.1 Wheat cytosol 52.52 48.55
TraesCS4B01G256600.1 Wheat cytosol 50.96 48.43
TraesCS4A01G048200.1 Wheat cytosol 50.96 48.35
HORVU5Hr1G018480.1 Barley cytosol 52.87 48.25
HORVU4Hr1G069760.10 Barley cytosol 51.3 48.2
TraesCS4D01G256700.1 Wheat cytosol 50.61 48.02
TraesCS4D01G077700.3 Wheat cytosol 52.87 47.95
GSMUA_Achr10P... Banana cytosol 47.3 47.8
TraesCS4A01G236100.1 Wheat cytosol 52.7 47.79
TraesCS4B01G078900.3 Wheat cytosol 52.7 47.79
Zm00001d033344_P001 Maize cytosol 52.7 47.72
Os03t0609800-02 Rice cytosol 52.35 47.48
CDX81462 Canola cytosol 49.74 47.43
CDY37223 Canola cytosol 49.39 47.1
Zm00001d013741_P001 Maize cytosol 52.52 46.97
Zm00001d048138_P007 Maize cytosol 50.78 46.79
OQU79444 Sorghum cytosol 52.17 46.58
Zm00001d030864_P001 Maize cytosol 51.48 46.18
GSMUA_Achr7P26250_001 Banana cytosol 50.09 46.15
CDY50369 Canola cytosol 40.52 45.42
GSMUA_Achr2P13430_001 Banana cytosol 51.3 43.96
CDY72257 Canola cytosol 37.57 42.69
CDY72267 Canola cytosol 37.57 42.69
CDX75198 Canola cytosol 41.22 41.07
CDX68790 Canola cytosol 40.7 40.91
Zm00001d028075_P010 Maize endoplasmic reticulum 50.43 35.94
CDX83620 Canola cytosol 33.39 35.1
CDX77798 Canola cytosol 33.74 34.58
CDY17704 Canola cytosol 33.74 34.58
CDY13635 Canola cytosol 33.74 33.8
CDY10395 Canola cytosol 31.83 33.7
CDY68489 Canola cytosol, plastid 25.74 32.96
CDX70320 Canola cytosol 32.35 32.52
CDX90249 Canola cytosol, mitochondrion, nucleus 35.48 32.33
CDX80858 Canola cytosol 33.04 32.31
CDX85639 Canola cytosol 31.65 31.82
CDY11245 Canola cytosol 33.04 31.77
CDY09586 Canola cytosol 35.65 31.25
CDY27653 Canola cytosol 33.39 31.07
CDY02293 Canola cytosol, mitochondrion, nucleus 35.48 30.96
CDX81221 Canola cytosol 38.43 30.27
CDY09812 Canola cytosol 32.0 30.26
CDY18715 Canola cytosol 37.91 30.11
CDX84515 Canola cytosol 37.91 30.03
CDX69627 Canola cytosol 31.3 29.65
CDY45241 Canola cytosol 30.78 29.6
CDX77951 Canola cytosol 28.0 29.38
CDX73781 Canola cytosol 27.83 29.36
CDX99692 Canola cytosol, mitochondrion, nucleus 32.87 29.3
CDY12841 Canola cytosol 30.43 29.02
CDY30765 Canola cytosol 31.83 28.86
CDY57436 Canola cytosol 30.09 28.69
CDY37857 Canola cytosol 29.57 28.33
CDY30615 Canola cytosol 24.35 28.06
CDX85365 Canola cytosol 30.09 27.9
CDX86278 Canola cytosol 30.09 27.9
CDY57361 Canola cytosol 24.17 27.86
CDX89922 Canola cytosol 30.43 27.78
CDY18140 Canola cytosol 30.26 27.62
CDX84827 Canola cytosol 26.78 27.26
CDY02075 Canola cytosol 27.13 26.9
CDX73937 Canola plastid 27.3 26.88
CDY10743 Canola cytosol 27.13 26.85
CDY00659 Canola plastid 27.3 26.84
CDY37449 Canola cytosol 22.61 26.75
CDY23992 Canola cytosol 26.26 26.73
CDY32492 Canola cytosol 29.57 26.65
CDX69851 Canola cytosol 28.87 26.35
CDY09561 Canola cytosol 27.48 26.16
CDY02305 Canola cytosol 27.48 26.03
CDY72506 Canola cytosol 5.74 25.98
CDY52208 Canola plastid 29.04 25.85
CDX96986 Canola cytosol 28.0 25.72
CDX83030 Canola plastid 23.3 25.05
CDY29723 Canola cytosol 29.22 24.1
CDY20341 Canola cytosol 28.87 23.38
CDY12056 Canola plasma membrane 35.3 12.58
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1UniProt:A0A078GBG9InterPro:BTB/POZ_domEnsemblPlants:CDY22422ProteinID:CDY22422
ProteinID:CDY22422.1ncoils:CoilGO:GO:0003674GO:GO:0005488GO:GO:0005515EnsemblPlantsGene:GSBRNA2T00018918001
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097
PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF26InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EEED46SEG:seg::::
Description
BnaC03g61350DBnaC03g61350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GBG9]
Coordinates
chrLK032131:+:16764..19189
Molecular Weight (calculated)
63842.9 Da
IEP (calculated)
6.589
GRAVY (calculated)
-0.328
Length
575 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DSFQSEGDSI RYVPSDLATD VIVIIGDVKF YLHKFPLLSK SACLQKLIAT TSSSNEDNEI HEEDEIEIAE FPGGPASFEI CAKFCYGMTV
101: TLNAYNVVAA RCAAEFLEMH ETVEKGNLVY KIKVFLNSSI LQTWKDSIIV LQTTRALSTY AEELKLTGRC LDSIASKASI DTSKVEWSYT YSKKKNLDNG
201: LRKPQAVPRD WWVEDLCDLH ISLYKRVITT IEARGRVSSD VIGEALHAYA NKRVPGFSKS SSSVQITDVS KYKALVGSII ELIPDEKQSV SSSFLTRLLR
301: ASIFLGCYEE TGLMNRVGER LDEVSLGDVM LYDVDLMQSL VEVFLKCHHS EEDDIKAKAS VAKLVDGYLA ENSRDSDSLT LQKFLSLAEM VSSFPRQSHD
401: GVYRAIDMFL KLHPEISKSE KKRLCRLMDC RKLSAEACAH AVQNERLPMR VVVQVLFFEQ VRANSNGSSS TGDSTPEITP ASRSTNTEDD RESWDTEDIK
501: ALRGELASLR LTKNQQQENS KGKLVKGGGL GVSRVFSKLW SSKERGGEMM SSSGTSSPGS VNDDSKSSSS TSKKH
Best Arabidopsis Sequence Match ( AT4G37590.1 )
(BLAST)
001: MKFMKLGSKP DSFQSEGDNV RYVSSELATD VIVIIGDVKF YLHKFPLLSK SARLQKLITT STSSSNEENQ IHHHHHEDEI EIAEIPGGPA SFEICAKFCY
101: GMTVTLNAYN VVAARCAAEF LEMYETVEKG NLVYKIEVFL NSSILQSWKD SIIVLQTTRA LSPYSEELKL TGRCLDSIAS RASIDTSKVE WSYTYSKKKN
201: LDNGLRKPQA VPRDWWVEDL CDLHIDLYKR ALATIEARGN VSADVIGEAL HAYAIKRIPG FSKSSSVQVT DFAKYRALAD SIIELIPDEK RSVSSSFLTK
301: LLRASIFLGC DEVAGLKNRV GERLDEANLG DVLLYDVELM QSLVEVFLKS RDPREDDVTA KASVAKLVDG YLAEKSRDSD NLPLQKFLSL AEMVSSFPRQ
401: SHDGVYRAID MFLKEHPEMN KSEKKRICRL MDCRKLSAEA CAHAVQNERL PMRVVVQVLF FEQVRANNNG SSSTGNSTPE VIPASRSTNT TDQEDTECWD
501: TEDIKALRGE LANLRLAKNQ QESHNQGKLM KGGGLGVSRV FSKLWSGKER SGDMISSSGT SSPGSVNDDS KSSSSTSKKH
Arabidopsis Description
NPY5BTB/POZ domain-containing protein NPY5 [Source:UniProtKB/Swiss-Prot;Acc:Q0WL52]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.