CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73937	Canola	plastid	97.44	97.6
Bra001349.1-P	Field mustard	plastid	97.27	97.6
AT3G08660.1	Thale cress	plastid	76.75	77.15
CDY09561	Canola	cytosol	64.1	62.09
CDY02305	Canola	cytosol	64.1	61.78
KRH00498	Soybean	cytosol, plastid	62.39	60.03
KRH40661	Soybean	plastid	62.05	59.7
VIT_08s0056g00610.t01	Wine grape	cytosol	60.0	58.31
PGSC0003DMT400010359	Potato	cytosol	55.73	56.4
GSMUA_Achr7P21950_001	Banana	plastid	54.19	56.31
Solyc09g048980.2.1	Tomato	cytosol	50.6	56.06
TraesCS5A01G146300.1	Wheat	plastid	55.56	51.59
TraesCS5D01G146000.1	Wheat	plastid	55.56	51.59
EES16593	Sorghum	plastid	56.75	51.55
TraesCS5B01G145100.1	Wheat	plastid	55.38	51.43
HORVU5Hr1G046340.2	Barley	plastid	55.38	51.18
Os11t0118500-00	Rice	plastid	55.04	50.08
Os12t0117600-01	Rice	plastid	55.21	49.62
Zm00001d023313_P001	Maize	plastid	54.7	48.63
HORVU0Hr1G011770.1	Barley	cytosol	36.75	47.25
CDX86278	Canola	cytosol	44.79	42.26
CDX85365	Canola	cytosol	44.62	42.1
CDY18140	Canola	cytosol	42.73	39.68
CDX89922	Canola	cytosol	42.56	39.52
CDY32492	Canola	cytosol	42.22	38.71
CDY68489	Canola	cytosol, plastid	29.4	38.31
CDY52208	Canola	plastid	41.37	37.46
CDY37449	Canola	cytosol	30.09	36.21
CDY37857	Canola	cytosol	36.75	35.83
CDX83030	Canola	plastid	32.48	35.51
CDY12841	Canola	cytosol	36.58	35.49
CDY57436	Canola	cytosol	36.41	35.32
CDY10743	Canola	cytosol	34.87	35.11
CDY02075	Canola	cytosol	34.19	34.48
CDY30615	Canola	cytosol	28.89	33.87
CDY23992	Canola	cytosol	32.48	33.63
CDY57361	Canola	cytosol	28.55	33.47
CDX84827	Canola	cytosol	32.31	33.45
CDY10395	Canola	cytosol	30.94	33.33
CDX85639	Canola	cytosol	32.48	33.22
CDX70320	Canola	cytosol	31.62	32.34
CDY27653	Canola	cytosol	34.02	32.2
CDY45241	Canola	cytosol	32.65	31.94
CDX80858	Canola	cytosol	31.79	31.63
CDX90249	Canola	cytosol, mitochondrion, nucleus	33.85	31.38
CDX69627	Canola	cytosol	32.48	31.3
CDX73781	Canola	cytosol	29.06	31.19
CDX99692	Canola	cytosol, mitochondrion, nucleus	34.36	31.16
CDY11245	Canola	cytosol	31.79	31.1
CDY09586	Canola	cytosol	34.87	31.1
CDY02293	Canola	cytosol, mitochondrion, nucleus	34.7	30.8
CDY72267	Canola	cytosol	26.5	30.63
CDY72257	Canola	cytosol	26.5	30.63
CDX77951	Canola	cytosol	28.55	30.47
CDY09812	Canola	cytosol	31.45	30.26
CDY30765	Canola	cytosol	32.65	30.13
CDX81462	Canola	cytosol	30.26	29.35
CDY12846	Canola	cytosol	28.21	29.2
CDX81314	Canola	cytosol	26.15	29.09
CDY69095	Canola	cytosol	27.86	29.06
CDY18660	Canola	cytosol	26.15	28.98
CDY37223	Canola	cytosol	29.74	28.86
CDY50369	Canola	cytosol	25.3	28.85
CDY38923	Canola	cytosol	23.42	28.78
CDX89539	Canola	cytosol	23.25	28.39
CDY72506	Canola	cytosol	6.15	28.35
CDY44035	Canola	cytosol	27.18	27.65
CDY18715	Canola	cytosol	34.02	27.49
CDY22422	Canola	cytosol	26.84	27.3
CDX68790	Canola	cytosol	26.67	27.27
CDY29566	Canola	cytosol	26.84	27.16
CDX81221	Canola	cytosol	33.85	27.12
CDX84515	Canola	cytosol	33.5	27.0
CDX72639	Canola	cytosol	26.67	26.99
CDX75198	Canola	cytosol	26.15	26.52
CDX69851	Canola	cytosol	28.03	26.03
CDX83620	Canola	cytosol	24.27	25.96
CDX96986	Canola	cytosol	27.35	25.56
CDY29723	Canola	cytosol	30.26	25.39
CDY13635	Canola	cytosol	24.79	25.26
CDY20341	Canola	cytosol	29.91	24.65
CDY17704	Canola	cytosol	22.22	23.17
CDX77798	Canola	cytosol	22.22	23.17
CDY12056	Canola	plasma membrane	33.85	12.27

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	EnsemblPlants:CDY00659	ProteinID:CDY00659	ProteinID:CDY00659.1
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00110487001	InterPro:IPR000210
InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097	PFscan:PS51257
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695
UniPathway:UPA00143	UniParc:UPI0004EDF2B6	SEG:seg	:	:	:

Description

BnaC03g36430D

Coordinates

chrLK031921:-:75436..82286

Molecular Weight (calculated)

65575.7 Da

IEP (calculated)

5.665

GRAVY (calculated)

-0.293

Length

585 amino acids

Sequence
(BLAST)

001: MAGISNRPLS QSSSSTSSTS CNSCSSVPPP TFSTCIFSDV AGDITVVVDG ESFLLHKFPL VARCGKMRKI MRDLKDSSSS IELRDFPGGP LTFELAMKFC
101: YGINLEITPS NVVDLRCAAG YLEMTEDYKE DNLISQTESY LDKTAFRNLK KSVQVLTSCE RQELSEKFKI PDRCVEAIAM NACREQLVSN LSEELKGRDC
201: LAWWIEQLSA LGIDYYTRVV SVMARTGVRS ESIVASLMHY SQESLKGVIV DRNCQGQREI VEAIVTLLPS DERGTIIPLS FLLGMLKIGI TLGIEISYRL
301: ELERRIGQQL ESVSLDDLLI PSVGREESMY DVDTVHRILA CFLERVDEED EESGCDSDST GHYHGSLLKV GRIMDAYLAE IAPDPYLSLQ KFTAIIERLP
401: DYARIVDDGI YRAIDVYLKA HPLMTEEERK SLCKFIDCNK LSQDASNHMA QNDRLPVQMV VRALYSEQLR LKKALSGDSD EGVLDLSSGV LNRAVSPRDN
501: YASLRRENRE LKLEIARMRV RVSELEKEQT LMKEGMMERS GNNGGTFLTS LSKGIGKIGI FGGENRQKVN RKSRSVSERK TSRKR

Best Arabidopsis Sequence Match ( AT3G08660.1 )
(BLAST)

001: MGSDSTLSLP SSSPPCNNRS SVPPTFTTRI FSDVAGDIIV VVDGESFLLH KFPLVARSGK MRKMVRDLKD SSSMIELRDF PGGPSTFELT MKFCYGINFD
101: ITAFNVVSLR CAAGYLEMTE DYKEQNLIFR AENYLDQIVF RSFHESVLVL CSCETQEIAE TYEIPDRCVE AIAMNACRKQ LVSGLSEELK GRDCLEMWTE
201: ELSALGIDYY VQVVSAMARL SVRSESIVAS LVHYAKTSLK GIIDRNCQEQ RKIVEAMVNL LPNDEKGSYS LSIIPLGFLF GMLKVGTIID IEISCRLELE
301: RRIGHQLETA SLDDLLIPSV QNEDSMYDVD TVHRILTFFL ERIEEEDDEC GYDSDSTGQH SSLLKVGRIM DAYLVEIAPD PYLSLHKFTA IIETLPEHSR
401: IVDDGIYRAI DMYLKAHPLL TEEERKKLCN FIDCKKLSQE ASNHVAQNDR LPVQMVVRVL YTEQLRLKKA LSGDSEEGSW VLPSGVQSRA VSPRDTYAAL
501: RRENRELKLE ISRMRVRVSE LEKEHNLMKH EMMEKSGNNG GTFLTSLSKG IGRIATFGGE TRQKVNRKSR SVSERKSSRS GR

Arabidopsis Description

Putative BTB/POZ domain-containing protein At3g08660 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.