CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 5
mitochondrion 1
cytosol 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00498	Soybean	cytosol, plastid	96.38	96.38
VIT_08s0056g00610.t01	Wine grape	cytosol	75.99	76.74
PGSC0003DMT400010359	Potato	cytosol	70.07	73.7
Solyc09g048980.2.1	Tomato	cytosol	62.83	72.35
GSMUA_Achr7P21950_001	Banana	plastid	60.53	65.36
AT3G08570.1	Thale cress	plastid	63.82	62.88
CDX73937	Canola	plastid	60.03	62.5
AT3G08660.1	Thale cress	plastid	59.7	62.37
Bra001349.1-P	Field mustard	plastid	59.54	62.09
CDY00659	Canola	plastid	59.7	62.05
CDY09561	Canola	cytosol	60.36	60.76
Bra032401.1-P	Field mustard	cytosol	60.03	60.13
CDY02305	Canola	cytosol	59.7	59.8
TraesCS5D01G146000.1	Wheat	plastid	61.51	59.37
TraesCS5A01G146300.1	Wheat	plastid	61.18	59.05
TraesCS5B01G145100.1	Wheat	plastid	61.02	58.89
HORVU5Hr1G046340.2	Barley	plastid	61.18	58.77
EES16593	Sorghum	plastid	60.86	57.45
Os11t0118500-00	Rice	plastid	60.36	57.08
Os12t0117600-01	Rice	plastid	60.86	56.84
HORVU0Hr1G011770.1	Barley	cytosol	42.43	56.7
Zm00001d023313_P001	Maize	plastid	57.57	53.19
KRH66064	Soybean	extracellular	51.32	50.9
KRG99570	Soybean	cytosol, endoplasmic reticulum, nucleus	50.66	45.7
KRH31912	Soybean	cytosol	45.39	43.95
KRH71541	Soybean	plastid	45.23	43.65
KRH68133	Soybean	cytosol, plastid	44.57	43.08
KRG96392	Soybean	plastid	44.41	42.99
KRH04469	Soybean	cytosol	39.31	40.99
KRH58066	Soybean	cytosol	39.64	40.85
KRH77099	Soybean	cytosol	40.3	39.64
KRH28386	Soybean	cytosol	39.8	38.41
KRH30675	Soybean	cytosol	13.49	37.1
KRG98106	Soybean	cytosol	33.39	35.43
KRH17211	Soybean	cytosol	32.57	34.2
KRH72843	Soybean	cytosol	32.57	34.14
KRH12771	Soybean	cytosol	35.2	33.28
KRH28552	Soybean	cytosol	32.4	33.28
KRG91918	Soybean	cytosol	33.72	33.23
KRH37734	Soybean	cytosol	35.03	33.13
KRH34860	Soybean	cytosol	33.55	33.01
KRH19874	Soybean	cytosol	31.74	32.77
KRH21111	Soybean	cytosol	32.57	32.41
KRH23618	Soybean	cytosol	26.81	32.21
KRH32482	Soybean	cytosol	31.09	32.09
KRH08351	Soybean	cytosol	33.72	31.64
KRH30676	Soybean	plastid	14.8	31.58
KRH76914	Soybean	cytosol	26.48	31.57
KRH10586	Soybean	cytosol	34.38	31.1
KRH21782	Soybean	cytosol	34.38	30.87
KRH05372	Soybean	cytosol	31.25	30.84
KRH15648	Soybean	cytosol	31.09	30.73
KRH42114	Soybean	cytosol	33.88	30.65
KRH52322	Soybean	cytosol	30.59	30.44
KRH69999	Soybean	endoplasmic reticulum	34.05	30.44
KRH35678	Soybean	cytosol	31.09	30.29
KRH58085	Soybean	cytosol	30.92	30.13
KRH22745	Soybean	cytosol	31.25	30.02
KRG91101	Soybean	mitochondrion	31.09	30.0
KRH74516	Soybean	cytosol	30.26	29.92
KRH58082	Soybean	cytosol	30.76	29.78
KRH26561	Soybean	cytosol	30.76	29.45
KRH04439	Soybean	cytosol	30.43	29.41
KRH69640	Soybean	cytosol	30.59	29.25
KRH04442	Soybean	cytosol	30.26	29.21
KRH61660	Soybean	cytosol	30.1	29.0
KRH43181	Soybean	cytosol	29.44	28.59
KRH45579	Soybean	nucleus	29.77	28.55
KRG99441	Soybean	cytosol	29.61	28.48
KRH59336	Soybean	cytosol	29.44	28.41
KRG92834	Soybean	cytosol	25.82	27.79
KRH49804	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	34.05	27.71
KRH33962	Soybean	cytosol	24.67	26.55
KRH01932	Soybean	cytosol	25.0	25.98
KRH51214	Soybean	cytosol	24.67	25.34
KRH36642	Soybean	cytosol	23.52	23.87
KRH11633	Soybean	cytosol	23.52	23.71
KRG90163	Soybean	cytosol	16.45	20.83
KRH62777	Soybean	cytosol	10.36	20.0

Protein Annotations

EntrezGene:100801644	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02006045	InterPro:BTB/POZ_dom	ncoils:Coil
EnsemblPlantsGene:GLYMA_09G272500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR027356
UniProt:K7LGE1	EnsemblPlants:KRH40661	ProteinID:KRH40661	ProteinID:KRH40661.1	InterPro:NPH3_dom	PFAM:PF00651
PFAM:PF03000	PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF5	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI00023C8BAF	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:48896969..48901480

Molecular Weight (calculated)

67813.1 Da

IEP (calculated)

5.934

GRAVY (calculated)

-0.117

Length

608 amino acids

Sequence
(BLAST)

001: MVSETSLSSS KRSPATPKFC NSFTTRIFAD VAGDITIVVD GESFLLHKFP LVTLSGKIRK MVAEAKGSNV SNLELLNFPG GHQTFELAMK FCYGMNFEIT
101: TFNVARLLCA AEYLEMTEEY REQNLISRAE IYLNEIVFQS LQKSVEVLST CEMLPPDIVD EIEISNGCVE AIAMNACKEQ LVSGLSKLDC DGESRELKED
201: CVAWWVEDLS VLSIDYFQRV ICAMGRMGVR SDSIIASLMH YAQSSLKGIG KCQFWNPSRT NSSPTSVEKD QKIIVETLVS LMPTDKSSSI PLTFLFGMLK
301: MAIMLGAIIP CRLELERRIA LRLEMVSLDD LLIPSLQSGD SLFDVDTVHR LLVNFLQRVE EEETEDYGYE SDGFCSSGHG SLLKVGQLID AYLAEIAPDP
401: YLSLQKFIAL IEILPDYARV IDDGFYRAVD IYLKAHPALT EQECKKLCKL IDCQKLSQEA SNHAAQNDRL PLQMVVQVLY FEQLRLKNAM SGSLGDGLLS
501: QRISSGVPSA AMSPRDNYAS LRRENRELKL EISRMRVRLS ELEKEQMFMK QGMIDKAGNG RTFLTSLSKG IGRIAIFSGQ GGGKHQKSGR KSRGLEGKTG
601: RSRRHSVS

Best Arabidopsis Sequence Match ( AT3G08570.1 )
(BLAST)

001: MGIISDNAQS HSSSSAPAPS IFSSSFATRI FSDVAGDITI VVDGESFLLH KFPLVARCGK IRKMVAEMKE SSSNLSHTEL RDFPGGSKTF ELAMKFCYGI
101: NFEITISNVV AIRCAAGYLE MTEDFKEENL IARTETYLEQ VAFRSLEKSV EVLCSCETLY PQDIAETAHI PDRCVEAIAV NACREQLVLG LSRLNRGTES
201: GELKRGDSPE WWIEDLSALR IDYYARVVSA MARTGLRSES IITSLMHYAQ ESLKGIRNCK ERTKLDSGTF ENEQRNVLEA IVSLFPNDNV PLSFLFGMLR
301: VGITINVAIS CRLELERRIA QQLETVSLDD LLIPVVRDGD SMYDVDTVHR ILVCFLKKIE EEEEYDEDCC YENETENLTG SMCHSSLLKV GRIMDAYLAE
401: IAPDPCLSLH KFMALIEILP DYARVMDDGL YRAIDMFLKG HPSLNEQECK SLCKFIDTQK LSQEACNHVA QNDRLPMQMV VRVLYSEQLR MKNVMSGESG
501: EGLLLSSQKH SSENPSRAVS PRDTYASLRR ENRELKLEIS RVRVRLTELE KEQILMKQGM MEKSGHGGTL LTSLSKGIGR ISIFGGGPTE GKLRNANRKS
601: KSRLERKTVR SRPESMF

Arabidopsis Description

BTB/POZ domain-containing protein At3g08570 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9Z7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.