Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G30520.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT2G30520.1 | KRH27037 | AT2G42580.1 | 19000166 |
| AT2G30520.1 | KRH28781 | AT5G66280.1 | 21798944 |
| AT2G30520.1 | KRH76673 | AT5G66280.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG98106 | Soybean | cytosol | 89.59 | 34.55 |
| KRH17211 | Soybean | cytosol | 74.66 | 28.5 |
| KRH72843 | Soybean | cytosol | 73.3 | 27.93 |
| PGSC0003DMT400031245 | Potato | cytosol | 71.95 | 27.6 |
| Solyc07g043130.2.1 | Tomato | cytosol | 71.95 | 27.6 |
| VIT_06s0004g08230.t01 | Wine grape | mitochondrion | 71.04 | 27.45 |
| AT2G30520.1 | Thale cress | cytosol | 70.59 | 26.31 |
| CDY10743 | Canola | cytosol | 67.87 | 25.82 |
| CDY02075 | Canola | cytosol | 67.42 | 25.69 |
| Bra018309.1-P | Field mustard | cytosol, plastid | 67.87 | 25.38 |
| CDX84827 | Canola | cytosol | 63.8 | 24.96 |
| CDY23992 | Canola | cytosol | 63.8 | 24.96 |
| Bra022805.1-P | Field mustard | cytosol | 63.8 | 24.52 |
| GSMUA_Achr5P29690_001 | Banana | cytosol, plastid | 64.25 | 23.67 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 61.54 | 23.49 |
| TraesCS4A01G192900.1 | Wheat | cytosol | 55.66 | 21.89 |
| TraesCS4B01G122300.1 | Wheat | cytosol, plastid | 56.11 | 21.72 |
| TraesCS4D01G120400.1 | Wheat | cytosol, plastid | 55.2 | 21.37 |
| Zm00001d005051_P001 | Maize | cytosol | 53.85 | 20.62 |
| OQU82741 | Sorghum | plastid | 54.75 | 20.1 |
| Os12t0117400-01 | Rice | plasma membrane | 51.58 | 20.0 |
| HORVU4Hr1G023260.3 | Barley | cytosol, plastid | 54.3 | 19.17 |
| Os11t0118300-01 | Rice | cytosol, mitochondrion, nucleus | 51.58 | 18.48 |
| Zm00001d023314_P001 | Maize | cytosol | 50.68 | 17.55 |
| KRH58066 | Soybean | cytosol | 42.08 | 15.76 |
| KXG22914 | Sorghum | plastid | 49.32 | 15.27 |
| KRH04469 | Soybean | cytosol | 40.27 | 15.27 |
| KRH77099 | Soybean | cytosol | 41.63 | 14.89 |
| KRH28386 | Soybean | cytosol | 41.63 | 14.6 |
| KRH00498 | Soybean | cytosol, plastid | 37.56 | 13.65 |
| KRG96392 | Soybean | plastid | 38.46 | 13.54 |
| KRH68133 | Soybean | cytosol, plastid | 38.46 | 13.51 |
| KRH40661 | Soybean | plastid | 37.1 | 13.49 |
| KRH66064 | Soybean | extracellular | 36.2 | 13.05 |
| KRH31912 | Soybean | cytosol | 36.65 | 12.9 |
| KRH71541 | Soybean | plastid | 36.65 | 12.86 |
| KRG99570 | Soybean | cytosol, endoplasmic reticulum, nucleus | 35.29 | 11.57 |
| KRH28552 | Soybean | cytosol | 30.32 | 11.32 |
| KRH37734 | Soybean | cytosol | 32.13 | 11.04 |
| KRH12771 | Soybean | cytosol | 31.67 | 10.89 |
| KRH08351 | Soybean | cytosol | 31.67 | 10.8 |
| KRH15648 | Soybean | cytosol | 29.86 | 10.73 |
| KRH22745 | Soybean | cytosol | 29.86 | 10.43 |
| KRH35678 | Soybean | cytosol | 29.41 | 10.42 |
| KRH05372 | Soybean | cytosol | 28.96 | 10.39 |
| KRH69999 | Soybean | endoplasmic reticulum | 31.67 | 10.29 |
| KRG91918 | Soybean | cytosol | 28.51 | 10.21 |
| KRH76914 | Soybean | cytosol | 23.53 | 10.2 |
| KRH34860 | Soybean | cytosol | 28.51 | 10.19 |
| KRG91101 | Soybean | mitochondrion | 28.96 | 10.16 |
| KRH21111 | Soybean | cytosol | 28.05 | 10.15 |
| KRH10586 | Soybean | cytosol | 30.77 | 10.12 |
| KRH26561 | Soybean | cytosol | 28.96 | 10.08 |
| KRH21782 | Soybean | cytosol | 30.77 | 10.04 |
| KRH58082 | Soybean | cytosol | 28.51 | 10.03 |
| KRH42114 | Soybean | cytosol | 30.32 | 9.97 |
| KRH58085 | Soybean | cytosol | 28.05 | 9.94 |
| KRH43181 | Soybean | cytosol | 28.05 | 9.9 |
| KRH32482 | Soybean | cytosol | 26.24 | 9.85 |
| KRH04439 | Soybean | cytosol | 27.6 | 9.7 |
| KRH59336 | Soybean | cytosol | 27.6 | 9.68 |
| KRH19874 | Soybean | cytosol | 25.79 | 9.68 |
| KRH52322 | Soybean | cytosol | 26.7 | 9.66 |
| KRH04442 | Soybean | cytosol | 27.15 | 9.52 |
| KRH61660 | Soybean | cytosol | 27.15 | 9.51 |
| KRG99441 | Soybean | cytosol | 27.15 | 9.49 |
| KRH74516 | Soybean | cytosol | 26.24 | 9.43 |
| KRG90163 | Soybean | cytosol | 20.36 | 9.38 |
| KRH45579 | Soybean | nucleus | 26.7 | 9.31 |
| KRH49804 | Soybean | endoplasmic reticulum, nucleus, plasma membrane, plastid | 31.22 | 9.24 |
| KRH69640 | Soybean | cytosol | 26.24 | 9.12 |
| KRH33962 | Soybean | cytosol | 21.27 | 8.32 |
| KRG92834 | Soybean | cytosol | 20.36 | 7.96 |
| KRH01932 | Soybean | cytosol | 19.91 | 7.52 |
| KRH11633 | Soybean | cytosol | 20.36 | 7.46 |
| KRH51214 | Soybean | cytosol | 19.91 | 7.43 |
| KRH62777 | Soybean | cytosol | 10.41 | 7.3 |
| KRH36642 | Soybean | cytosol | 19.46 | 7.18 |
| KRH23618 | Soybean | cytosol | 12.22 | 5.34 |
| KRH30676 | Soybean | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.1 | EMBL:ACUP02007055 | ncoils:Coil | EnsemblPlantsGene:GLYMA_11G200100 | GO:GO:0003674 | GO:GO:0004871 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 |
| GO:GO:0009638 | GO:GO:0009987 | InterPro:IPR027356 | UniProt:K7LR66 | EnsemblPlants:KRH30675 | ProteinID:KRH30675 |
| ProteinID:KRH30675.1 | InterPro:NPH3_dom | PFAM:PF03000 | PFscan:PS51649 | PANTHER:PTHR32370 | PANTHER:PTHR32370:SF17 |
| InterPro:RPT2 | UniParc:UPI0002965129 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr11:-:27880234..27881337
Molecular Weight (calculated)
25054.9 Da
IEP (calculated)
9.770
GRAVY (calculated)
-0.667
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MQRVVKTVDA YLSEIAAYGD LSISKFNGIA TLIPKSARKI DDDLYRAVDI YLKAHPQLDE IEREKVCSVM DPLKLSYEAR VHASQNKRLP VQIVLHALYY
101: DQLRLRSGAE EREVATEKNQ LQMDVTLVRE NEELRTELMK MKMYISDLQQ NKNTNNGANP QGHGTTSSAA NPNPKKATFF SSVSKTLGKL NPFRNGSKDT
201: THLEDGNVDL TKPRRRRFSV S
101: DQLRLRSGAE EREVATEKNQ LQMDVTLVRE NEELRTELMK MKMYISDLQQ NKNTNNGANP QGHGTTSSAA NPNPKKATFF SSVSKTLGKL NPFRNGSKDT
201: THLEDGNVDL TKPRRRRFSV S
001: MATEGKNPIN MNSMSSSLAR TGQWVFSQDI PTDVVVEVGE ANFSLHKFML VAKSNYIRKL IMESKDSDVT RINLSDIPGG PEIFEKAAKF CYGVNFEITV
101: QNVAALHCAA EFLQMTDKYC DNNLAGRTQD FLSQVALSSL SGAIVVLKSC EILLPISRDL GIVRRCVDVV GAKACNEAMF PCRTPPNWWT EELCILDVDF
201: FSDVVSSMKQ RGVKPSSLAS AIITYTEKSL RDLVRDHSGR GVKYSDPGDN ESDERSQQRD LVQSIVSLLP SDKGLFPVNF LCSLLRCAVF LDTSLTCKNE
301: LEKRISVVLE HVSVDDLLIP SFTYDGERLL DLDSVRRIIS AFVEKEKNVG VFNGGDFNRG VCSVSLQRVA KTVDSYLAEI ATYGDLTISK FNAIANLVPK
401: SARKSDDDLY RAIDIFLKAH PNLDEIEREK VCSSMDPLKL SYDARLHASQ NKRLPVNIVL HALYYDQLKL RSGVAEQEER AVVVLPEALK TRSQLQADTT
501: LAKENEALRS ELMKMKMYVS DMQKNKNGAG ASSSNSSSLV SSKKSKHTFF SSVSKKLGKL NPFKNGSKDT SHIDEDLGGV DITKPRRRRF SIS
101: QNVAALHCAA EFLQMTDKYC DNNLAGRTQD FLSQVALSSL SGAIVVLKSC EILLPISRDL GIVRRCVDVV GAKACNEAMF PCRTPPNWWT EELCILDVDF
201: FSDVVSSMKQ RGVKPSSLAS AIITYTEKSL RDLVRDHSGR GVKYSDPGDN ESDERSQQRD LVQSIVSLLP SDKGLFPVNF LCSLLRCAVF LDTSLTCKNE
301: LEKRISVVLE HVSVDDLLIP SFTYDGERLL DLDSVRRIIS AFVEKEKNVG VFNGGDFNRG VCSVSLQRVA KTVDSYLAEI ATYGDLTISK FNAIANLVPK
401: SARKSDDDLY RAIDIFLKAH PNLDEIEREK VCSSMDPLKL SYDARLHASQ NKRLPVNIVL HALYYDQLKL RSGVAEQEER AVVVLPEALK TRSQLQADTT
501: LAKENEALRS ELMKMKMYVS DMQKNKNGAG ASSSNSSSLV SSKKSKHTFF SSVSKKLGKL NPFKNGSKDT SHIDEDLGGV DITKPRRRRF SIS
Arabidopsis Description
RPT2Root phototropism protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q682S0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.