Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42114 | Soybean | cytosol | 86.21 | 95.83 |
| KRH10586 | Soybean | cytosol | 75.77 | 84.23 |
| KRH23618 | Soybean | cytosol | 57.03 | 84.19 |
| KRH21782 | Soybean | cytosol | 75.9 | 83.75 |
| VIT_03s0038g00270.t01 | Wine grape | cytosol | 74.83 | 82.94 |
| PGSC0003DMT400083737 | Potato | cytosol | 71.75 | 81.34 |
| Solyc10g047530.1.1 | Tomato | cytosol | 73.09 | 81.01 |
| Solyc01g105680.2.1 | Tomato | nucleus | 72.16 | 80.57 |
| PGSC0003DMT400006173 | Potato | cytosol | 72.82 | 80.47 |
| GSMUA_Achr3P20380_001 | Banana | cytosol | 59.97 | 77.91 |
| Bra024285.1-P | Field mustard | cytosol | 70.42 | 72.55 |
| CDX84515 | Canola | cytosol | 70.42 | 72.45 |
| AT5G64330.1 | Thale cress | cytosol | 71.49 | 71.58 |
| CDX81221 | Canola | cytosol | 69.48 | 71.1 |
| CDY18715 | Canola | cytosol | 68.67 | 70.86 |
| Bra037773.1-P | Field mustard | cytosol | 69.08 | 70.01 |
| TraesCS6A01G085100.1 | Wheat | cytosol | 61.58 | 62.93 |
| HORVU6Hr1G015480.1 | Barley | cytosol | 61.58 | 62.93 |
| TraesCS6B01G117400.1 | Wheat | cytosol | 62.12 | 62.87 |
| TraesCSU01G114000.1 | Wheat | cytosol | 61.85 | 62.77 |
| Zm00001d016898_P001 | Maize | cytosol | 61.58 | 61.42 |
| EES07014 | Sorghum | nucleus | 62.25 | 60.16 |
| Os02t0568200-00 | Rice | cytosol | 61.31 | 60.1 |
| Zm00001d004440_P001 | Maize | cytosol | 47.39 | 55.49 |
| GSMUA_Achr1P21440_001 | Banana | cytosol | 44.18 | 54.28 |
| KXG25806 | Sorghum | cytosol | 45.38 | 51.83 |
| KRH43181 | Soybean | cytosol | 38.29 | 45.69 |
| KRH59336 | Soybean | cytosol | 37.62 | 44.6 |
| KRH58085 | Soybean | cytosol | 32.13 | 38.46 |
| KRH58082 | Soybean | cytosol | 32.26 | 38.38 |
| KRH12771 | Soybean | cytosol | 32.93 | 38.26 |
| KRH33962 | Soybean | cytosol | 28.92 | 38.23 |
| KRH04439 | Soybean | cytosol | 32.13 | 38.16 |
| KRH37734 | Soybean | cytosol | 32.8 | 38.1 |
| KRH04442 | Soybean | cytosol | 32.13 | 38.1 |
| KRH74516 | Soybean | cytosol | 30.66 | 37.24 |
| KRG92834 | Soybean | cytosol | 28.11 | 37.17 |
| KRH21111 | Soybean | cytosol | 30.25 | 36.99 |
| KRH32482 | Soybean | cytosol | 28.92 | 36.67 |
| KRH19874 | Soybean | cytosol | 28.92 | 36.67 |
| KRH69640 | Soybean | cytosol | 31.19 | 36.64 |
| KRG99441 | Soybean | cytosol | 30.92 | 36.55 |
| KRH77099 | Soybean | cytosol | 30.12 | 36.41 |
| KRH05372 | Soybean | cytosol | 29.99 | 36.36 |
| KRH45579 | Soybean | nucleus | 30.66 | 36.12 |
| KRH15648 | Soybean | cytosol | 29.72 | 36.1 |
| KRH35678 | Soybean | cytosol | 30.12 | 36.06 |
| KRH34860 | Soybean | cytosol | 29.72 | 35.92 |
| KRG91918 | Soybean | cytosol | 29.59 | 35.82 |
| KRH58066 | Soybean | cytosol | 27.98 | 35.42 |
| KRH04469 | Soybean | cytosol | 27.58 | 35.33 |
| KRH28386 | Soybean | cytosol | 29.72 | 35.24 |
| KRH66064 | Soybean | extracellular | 28.78 | 35.07 |
| KRH28552 | Soybean | cytosol | 27.71 | 34.97 |
| KRG91101 | Soybean | mitochondrion | 29.45 | 34.92 |
| KRH00498 | Soybean | cytosol, plastid | 28.38 | 34.87 |
| KRH52322 | Soybean | cytosol | 28.51 | 34.86 |
| KRH01932 | Soybean | cytosol | 27.18 | 34.7 |
| KRH08351 | Soybean | cytosol | 29.99 | 34.57 |
| KRH40661 | Soybean | plastid | 27.71 | 34.05 |
| KRH26561 | Soybean | cytosol | 28.78 | 33.86 |
| KRH11633 | Soybean | cytosol | 27.31 | 33.83 |
| KRH51214 | Soybean | cytosol | 26.77 | 33.78 |
| KRH36642 | Soybean | cytosol | 27.04 | 33.72 |
| KRG96392 | Soybean | plastid | 27.98 | 33.28 |
| KRH68133 | Soybean | cytosol, plastid | 27.98 | 33.23 |
| KRH22745 | Soybean | cytosol | 28.11 | 33.18 |
| KRH61660 | Soybean | cytosol | 27.98 | 33.12 |
| KRH31912 | Soybean | cytosol | 27.58 | 32.8 |
| KRH69999 | Soybean | endoplasmic reticulum | 29.85 | 32.79 |
| KRG99570 | Soybean | cytosol, endoplasmic reticulum, nucleus | 29.45 | 32.64 |
| KRH72843 | Soybean | cytosol | 25.3 | 32.59 |
| KRH71541 | Soybean | plastid | 27.44 | 32.54 |
| KRH17211 | Soybean | cytosol | 25.17 | 32.47 |
| KRH76914 | Soybean | cytosol | 22.09 | 32.35 |
| KRG98106 | Soybean | cytosol | 24.77 | 32.29 |
| KRH30676 | Soybean | plastid | 12.05 | 31.58 |
| KRH30675 | Soybean | cytosol | 9.24 | 31.22 |
| KRH62777 | Soybean | cytosol | 12.99 | 30.79 |
| KRG90163 | Soybean | cytosol | 18.34 | 28.54 |
Protein Annotations
| EntrezGene:100810791 | MapMan:19.2.2.8.2.2.1 | Gene3D:3.30.710.10 | EMBL:ACUP02004645 | InterPro:BTB/POZ_dom | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_07G180900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016567 |
| GO:GO:0019538 | InterPro:IPR000210 | InterPro:IPR027356 | UniProt:K7L2H2 | EnsemblPlants:KRH49804 | ProteinID:KRH49804 |
| ProteinID:KRH49804.1 | InterPro:NPH3-like | InterPro:NPH3_dom | PFAM:PF03000 | PFscan:PS50097 | PFscan:PS51649 |
| PANTHER:PTHR32370 | PANTHER:PTHR32370:SF6 | InterPro:SKP1/BTB/POZ_sf | SUPFAM:SSF54695 | TMHMM:TMhelix | UniParc:UPI000295FDBE |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:34906181..34910151
Molecular Weight (calculated)
83822.1 Da
IEP (calculated)
7.696
GRAVY (calculated)
-0.332
Length
747 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFCAESDKF EISPSTPMWG SSSLFISFLS LLIHFALWFT PSLFFFSHLE ATFLGKTSLP CSCVVSSGLV LSMWESESES GAGREYGSGL LTSTKHSVKT
101: EGFQQRGNSW YVSADIPSDL LVQIGDANFH LHKYPLLSRS GKLNRIIYDS RDPDLSKIVM DDLPGGPEAF ELASKFCYGI AIDLTSGNIS GLRCAAEYLE
201: MTEDLEEGNL IFKTEAFLSY VVLSSWRDSI VVLKSCEKLS PWAENLQIVR RCSESIAWKA CANPKGIRWS YTGRAPKVAS PKWNDMKNSS PSRNQQVPPD
301: WWFEDVSILR IDHFVRVITA IKVKGMRFEL IGAGIMHYAT KWLPGLMNIG TAIPGEEGSN SSTSNSSSSN GGGGGSWKGG LHMIVAGPRD DTSTLQAKDQ
401: RMIVESLVSI IPPQKDSVSC SFLLRLLRMA NNMLKVAPAL ITELEKRVGM QFEQATLADL LIPCYNKNET TYDVDLVQRL LEHFLVQEQT ESSSPSRPPF
501: SDKHVSSNIN AKTRVARLVD SYLTEVSRDR NLSLTKFQVL AEALPESART SDDGLYRAVD SYLKAHPTLT EHERKRLCRV MDCQKLSIDA CMHAAQNERL
601: PLRVVVQVLF SEQVKISNAL ANSSLKEGAE SHYQPMIPNR KTLLEGTPQS FQEGWTAAKK DINTLKFELE TVKTKYLELQ NDMENLQRQF DKLLKQKHTS
701: AWTSGWKKLS KLTKMTNEEN HDISPQIPTS EEQNRKTTTR RWRNSIS
101: EGFQQRGNSW YVSADIPSDL LVQIGDANFH LHKYPLLSRS GKLNRIIYDS RDPDLSKIVM DDLPGGPEAF ELASKFCYGI AIDLTSGNIS GLRCAAEYLE
201: MTEDLEEGNL IFKTEAFLSY VVLSSWRDSI VVLKSCEKLS PWAENLQIVR RCSESIAWKA CANPKGIRWS YTGRAPKVAS PKWNDMKNSS PSRNQQVPPD
301: WWFEDVSILR IDHFVRVITA IKVKGMRFEL IGAGIMHYAT KWLPGLMNIG TAIPGEEGSN SSTSNSSSSN GGGGGSWKGG LHMIVAGPRD DTSTLQAKDQ
401: RMIVESLVSI IPPQKDSVSC SFLLRLLRMA NNMLKVAPAL ITELEKRVGM QFEQATLADL LIPCYNKNET TYDVDLVQRL LEHFLVQEQT ESSSPSRPPF
501: SDKHVSSNIN AKTRVARLVD SYLTEVSRDR NLSLTKFQVL AEALPESART SDDGLYRAVD SYLKAHPTLT EHERKRLCRV MDCQKLSIDA CMHAAQNERL
601: PLRVVVQVLF SEQVKISNAL ANSSLKEGAE SHYQPMIPNR KTLLEGTPQS FQEGWTAAKK DINTLKFELE TVKTKYLELQ NDMENLQRQF DKLLKQKHTS
701: AWTSGWKKLS KLTKMTNEEN HDISPQIPTS EEQNRKTTTR RWRNSIS
001: MMWESESDGG VGVGGGGGRE YGDGVLSSNK HGGVKTDGFE LRGQSWFVAT DIPSDLLVKI GDMNFHLHKY PLLSRSGKMN RLIYESRDPD PTILILDDLP
101: GGPEAFELAS KFCYGVPVDL TATNISGLRC AAEYLEMTED LEEGNLIFKT EAFLSYVVLS SWRDSILVLK SCEKLSPWAE NLQIVRRCSE SIAWKACSNP
201: KGIRWAYTGK APSPSTTNFA GSSPRWNESK DSSFYCSPSR NTNSQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGAVIMHYAG KWLPGLIKEG
301: GVAIAPAMSS AIGGGLGLGG DEMSISCGSN SSGGSSGPDW KGGLHMVLSA GKTNGHQDSV ACLAGLGISP KDQRMIVESL ISIIPPQKDS VTCSFLLRLL
401: RAANMLKVAP ALITELEKRV GMQFEQATLQ DLLIPGYNNK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSPSQSMY ADIPRGNNNN GGGGGGNNQN
501: AKMRVARLVD SYLTEVARDR NLPLTKFQVL AEALPESART CDDGLYRAID SYLKAHPTLS EHERKRLCRV MDCQKLSMDA CMHAAQNERL PLRVVVQVLF
601: SEQVKISNAL ANTSLKESTT LGEAMGTYQP MIPNRKTLIE ATPQSFQEGW AAAKKDINTL KFELETVKTK YVELQNEMEV MQRQFEKTGK VKNTPSSSAW
701: TSGWKKLSKL TKMSGQESHD ISSGGEQAGV DHPPPRKPRR WRNSIS
101: GGPEAFELAS KFCYGVPVDL TATNISGLRC AAEYLEMTED LEEGNLIFKT EAFLSYVVLS SWRDSILVLK SCEKLSPWAE NLQIVRRCSE SIAWKACSNP
201: KGIRWAYTGK APSPSTTNFA GSSPRWNESK DSSFYCSPSR NTNSQPVPPD WWFEDVSILR IDHFVRVITA IKVKGMRFEL LGAVIMHYAG KWLPGLIKEG
301: GVAIAPAMSS AIGGGLGLGG DEMSISCGSN SSGGSSGPDW KGGLHMVLSA GKTNGHQDSV ACLAGLGISP KDQRMIVESL ISIIPPQKDS VTCSFLLRLL
401: RAANMLKVAP ALITELEKRV GMQFEQATLQ DLLIPGYNNK GETMYDVDLV QRLLEHFLVQ EQTEGSSPSR MSPSPSQSMY ADIPRGNNNN GGGGGGNNQN
501: AKMRVARLVD SYLTEVARDR NLPLTKFQVL AEALPESART CDDGLYRAID SYLKAHPTLS EHERKRLCRV MDCQKLSMDA CMHAAQNERL PLRVVVQVLF
601: SEQVKISNAL ANTSLKESTT LGEAMGTYQP MIPNRKTLIE ATPQSFQEGW AAAKKDINTL KFELETVKTK YVELQNEMEV MQRQFEKTGK VKNTPSSSAW
701: TSGWKKLSKL TKMSGQESHD ISSGGEQAGV DHPPPRKPRR WRNSIS
Arabidopsis Description
RPT3Root phototropism protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMF5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.