CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH10586
KRH21782
KRH23618
KRH42114
KRH49804

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	KRH10586	AT5G64330.1	16777956
AT4G25160.1	KRH21782	AT5G64330.1	16777956
AT4G25160.1	KRH23618	AT5G64330.1	16777956
AT4G25160.1	KRH42114	AT5G64330.1	16777956
AT4G25160.1	KRH49804	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56330	Soybean	cytosol, plasma membrane, plastid	91.48	92.74
VIT_16s0013g01920.t01	Wine grape	cytosol	61.85	63.9
Solyc03g093450.2.1	Tomato	nucleus	59.26	59.41
PGSC0003DMT400048527	Potato	cytosol	59.01	59.16
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	36.54	55.95
Solyc05g051610.1.1	Tomato	cytosol	56.05	54.11
PGSC0003DMT400018596	Potato	cytosol	56.3	53.84
Bra012943.1-P	Field mustard	cytosol	44.57	50.28
AT4G25160.1	Thale cress	plastid	51.6	50.06
CDX92680	Canola	plastid	49.88	50.0
Bra013868.1-P	Field mustard	plastid	51.36	49.52
CDY34347	Canola	plastid	51.36	49.52
Os06t0140800-01	Rice	plasma membrane	49.26	49.5
CDY42870	Canola	cytosol	48.27	49.37
CDY02134	Canola	cytosol	46.91	49.29
CDY68766	Canola	cytosol, plastid	48.15	49.24
Bra029318.1-P	Field mustard	cytosol	48.15	49.24
GSMUA_Achr11P...	Banana	cytosol	48.4	49.06
Bra019185.1-P	Field mustard	plastid	48.89	49.01
CDY23058	Canola	cytosol, plastid	47.53	48.61
GSMUA_Achr5P21060_001	Banana	cytosol	48.15	48.57
Bra035920.1-P	Field mustard	cytosol	47.28	48.42
CDY11059	Canola	plastid	48.52	48.4
CDY02135	Canola	cytosol	50.37	48.34
CDY16812	Canola	cytosol	47.53	48.31
CDX87220	Canola	cytosol, peroxisome, plasma membrane	49.26	48.25
KXG19255	Sorghum	cytosol	48.02	48.2
Bra012944.1-P	Field mustard	cytosol	48.15	48.15
CDY23059	Canola	cytosol	50.37	48.11
CDY16813	Canola	cytosol	49.14	47.95
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	50.49	47.84
AT5G51270.1	Thale cress	cytosol	47.28	47.58
AT5G61550.2	Thale cress	cytosol	50.37	47.44
AT5G61560.3	Thale cress	cytosol	47.65	47.36
CDY42871	Canola	cytosol	47.53	46.84
CDY00462	Canola	mitochondrion, plasma membrane	36.79	46.78
CDY00464	Canola	cytosol	44.57	46.52
CDX99935	Canola	cytosol	42.22	46.09
CDY16329	Canola	plastid	45.06	46.09
Bra022543.1-P	Field mustard	plastid	44.94	46.02
CDY00461	Canola	cytosol	45.06	45.97
Bra015198.1-P	Field mustard	cytosol	42.96	45.73
CDX87221	Canola	cytosol	40.86	44.97
CDX91574	Canola	plastid	44.2	44.86
Zm00001d045397_P001	Maize	cytosol	41.11	43.99
TraesCS4A01G382900.1	Wheat	cytosol	44.32	43.52
KRH19218	Soybean	plastid	25.56	43.31
CDY61455	Canola	cytosol	43.21	43.16
TraesCS7D01G079400.2	Wheat	cytosol	44.81	43.01
KRH23263	Soybean	cytosol	24.94	42.98
Bra015196.1-P	Field mustard	cytosol	34.69	42.58
TraesCS7A01G084400.4	Wheat	cytosol	42.72	41.29
TraesCS4A01G382700.4	Wheat	cytosol	42.47	41.2
HORVU7Hr1G018750.2	Barley	cytosol	40.74	40.1
KRH05306	Soybean	cytosol	24.81	39.72
KRH02677	Soybean	mitochondrion	35.93	38.29
HORVU7Hr1G018700.1	Barley	cytosol, plastid	32.47	35.88
KRG93493	Soybean	cytosol	23.46	33.75
KRH15730	Soybean	cytosol	28.64	33.72
KRH10056	Soybean	nucleus	28.4	33.09
KRH61536	Soybean	cytosol	29.14	32.82
KRH04920	Soybean	cytosol	32.1	32.46
KRH16168	Soybean	cytosol	31.11	32.35
CDY03375	Canola	plastid	51.36	32.07
KRH47533	Soybean	plastid	28.77	31.87
KRH61953	Soybean	cytosol	30.86	31.85
KRH46976	Soybean	nucleus	28.89	31.62
KRH52614	Soybean	plasma membrane	30.37	31.38
KRH09591	Soybean	nucleus, plasma membrane, plastid	30.0	31.15
KRH60113	Soybean	nucleus	30.0	30.8
KRH23722	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	29.51	30.56
KRH35280	Soybean	cytosol	26.42	30.35
KRH41398	Soybean	nucleus	29.38	30.16
KRH74142	Soybean	peroxisome	29.14	29.57
KRG91553	Soybean	cytosol	26.91	29.54
KRH49073	Soybean	nucleus	28.89	29.29
KRH00764	Soybean	plastid	31.73	29.11
KRH23063	Soybean	plastid	29.01	28.62
KRH40448	Soybean	cytosol	31.11	28.54
KRH10267	Soybean	plastid	28.64	28.4
KRH48130	Soybean	plastid	30.74	28.23
KRH29803	Soybean	cytosol	27.28	28.12
KRH65013	Soybean	plastid	30.12	27.79

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100801699	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620
EMBL:ACUP02002331	ncoils:Coil	EnsemblPlantsGene:GLYMA_04G121100	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	UniProt:I1JVT0	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729
EnsemblPlants:KRH62634	ProteinID:KRH62634	ProteinID:KRH62634.1	ProteinID:KRH62635.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003
PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00023C0257	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:15167665..15175524

Molecular Weight (calculated)

90258.9 Da

IEP (calculated)

7.396

GRAVY (calculated)

-0.362

Length

810 amino acids

Sequence
(BLAST)

001: MDKILEADAN NMSQHSSSSV VALAIKGNKK SKYVVQWALN KFVPEGMIIF KLIHVHGGIK GVPTPLGNVI PLSQVRNDVA TAFKKEVEWQ TNQMLLPFKR
101: MCEQRKVHVD VIVIESDDVA TAIADEVAKG AITKLVVGAS SRGLFKSKQK GMSTRISVST PRFCTIYAIS KGKLSIRPSD MPIDGNIIDD ASESETSLST
201: SSSSNYTSTS QTESASVSSY AALQSSSLTT QRFQALSSIN SALLSTNPSF ADTNHSRGQS LDLGRENTAS SSARNSDIDH ALSRVSSCKS FISDTESWMY
301: DQNSCKDVQL ATTLPSPNRQ AKYNLELEKL RIELRHAQGL HAVAQTEKIE ASRKLNDLSK RRSEETMRMK EIISKEEKAK ELAKLEREKY QDASREAEYL
401: KECAEREAAE KKEMELRAIR AAKEKEKLED ALSGSTPQYR KFTWDEIILA TSSFSEDLKI GMGAYGVVYK CNLYHTTVAV KVLTLNTNVN SKRKQFQQEL
501: EILSRIRHPN LLLLLGACPD HGCLVYEYME NGNLEDRLLR KNNTSPIPWF ERFRIALEVA SSLAFLHSSK PEPIIHRDLK PANILLDRNL VSKIGDIGLS
601: TVLNSDNLSI MSKDTAPVGT LCYIDPEYQR TGLISPKSDI YAFGMVILQL LTAKPAIALA HKVETAIDSG NLTDILDPEA GAWPYQETLD LALLGLSCAE
701: LRRRDRPDLQ DHVLPTLERL KEVVDRAQCS ASIVTIKSKP PNHFICPILQ DVMDDPCVAA DGYTYDRKAI EKWLEENDKS PMTNMALPHK HLIPNYTLLS
801: AILEWKSRES

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.