Factsheet for Solyc05g051610.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g105680.2.1
Solyc10g047530.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	Solyc01g105680.2.1	AT5G64330.1	16777956
AT4G25160.1	Solyc10g047530.1.1	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018596	Potato	cytosol	97.02	96.1
VIT_16s0013g01920.t01	Wine grape	cytosol	57.93	61.99
Solyc03g093450.2.1	Tomato	nucleus	58.4	60.64
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	37.43	59.36
KRH56330	Soybean	cytosol, plasma membrane, plastid	53.99	56.7
KRH62634	Soybean	cytosol	54.11	56.05
CDX92680	Canola	plastid	50.42	52.35
Bra019185.1-P	Field mustard	plastid	50.06	51.98
CDY11059	Canola	plastid	50.3	51.97
Bra013868.1-P	Field mustard	plastid	51.85	51.79
CDY34347	Canola	plastid	51.85	51.79
AT4G25160.1	Thale cress	plastid	50.89	51.14
CDY00462	Canola	mitochondrion, plasma membrane	37.66	49.61
Bra022543.1-P	Field mustard	plastid	46.48	49.3
CDY16329	Canola	plastid	46.48	49.24
AT5G51270.1	Thale cress	cytosol	46.84	48.82
CDY02135	Canola	cytosol	49.11	48.82
Os06t0140800-01	Rice	plasma membrane	46.84	48.76
CDY00461	Canola	cytosol	46.13	48.74
CDY16812	Canola	cytosol	46.25	48.68
Bra035920.1-P	Field mustard	cytosol	45.89	48.67
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	49.58	48.66
CDY23059	Canola	cytosol	48.99	48.47
Bra012944.1-P	Field mustard	cytosol	46.6	48.27
Bra015198.1-P	Field mustard	cytosol	43.74	48.23
CDY00464	Canola	cytosol	44.58	48.2
AT5G61550.2	Thale cress	cytosol	49.34	48.14
CDX91574	Canola	plastid	45.77	48.12
CDX99935	Canola	cytosol	42.55	48.11
Bra012943.1-P	Field mustard	cytosol	41.12	48.05
GSMUA_Achr5P21060_001	Banana	cytosol	45.89	47.95
CDY16813	Canola	cytosol	47.08	47.59
CDY42871	Canola	cytosol	46.6	47.57
CDX87220	Canola	cytosol, peroxisome, plasma membrane	46.72	47.4
CDY42870	Canola	cytosol	44.34	46.97
CDY02134	Canola	cytosol	43.15	46.95
KXG19255	Sorghum	cytosol	45.05	46.84
Bra029318.1-P	Field mustard	cytosol	44.1	46.72
GSMUA_Achr11P...	Banana	cytosol	44.34	46.56
CDY68766	Canola	cytosol, plastid	43.86	46.46
CDY23058	Canola	cytosol, plastid	43.5	46.09
AT5G61560.3	Thale cress	cytosol	44.7	46.01
CDY61455	Canola	cytosol	43.62	45.13
CDX87221	Canola	cytosol	39.33	44.84
TraesCS4A01G382900.1	Wheat	cytosol	43.98	44.73
Bra015196.1-P	Field mustard	cytosol	34.92	44.39
Zm00001d045397_P001	Maize	cytosol	39.93	44.25
TraesCS7D01G079400.2	Wheat	cytosol	44.1	43.84
TraesCS4A01G382700.4	Wheat	cytosol	41.48	41.68
TraesCS7A01G084400.4	Wheat	cytosol	41.0	41.05
HORVU7Hr1G018750.2	Barley	cytosol	40.05	40.83
Solyc12g008990.1.1	Tomato	cytosol	33.97	37.5
Solyc07g040940.2.1	Tomato	cytosol	32.42	36.46
HORVU7Hr1G018700.1	Barley	cytosol, plastid	31.82	36.43
Solyc12g096010.1.1	Tomato	cytosol	27.06	34.24
Solyc08g069180.2.1	Tomato	cytosol	27.65	33.67
Solyc04g049400.2.1	Tomato	cytosol, mitochondrion, nucleus	31.11	33.33
Solyc06g043250.2.1	Tomato	cytosol	27.29	33.33
CDY03375	Canola	plastid	51.37	33.23
Solyc08g006140.1.1	Tomato	cytosol	30.04	31.74
Solyc06g062820.2.1	Tomato	cytosol	28.96	29.85
Solyc01g094660.2.1	Tomato	cytosol	29.32	27.52
Solyc11g065950.1.1	Tomato	plastid	26.82	26.32
Solyc03g025450.2.1	Tomato	cytosol	24.2	25.79

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	UniProt:K4C1J2	InterPro:Kinase-like_dom_sf	PFAM:PF04564	PFAM:PF07714
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF29
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402
SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc05g051610.1	EnsemblPlants:Solyc05g051610.1.1
UniParc:UPI00027658F9	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

No Description!

Coordinates

chr5:-:61980713..61984235

Molecular Weight (calculated)

93993.7 Da

IEP (calculated)

6.971

GRAVY (calculated)

-0.425

Length

839 amino acids

Sequence
(BLAST)

001: MEGQGTVQSP ISSVVAMAIT GNKNSRYVVK WALEKFIPEG ETRFMLLHVR PEITAVPTPM GNLIPIAQVR EDVADAFRKE VELQASEKLL PYKTMCSRRQ
101: VQVGVVQLES NDVINAIAGV VSKCSINKLV IGTSTPGLFS RGRNLSASIS ETAPTFCTVY AVSKGKLSSV RASSTENNRF LIDDNSDTSS SSNNSTSHSF
201: SSQGERTDHS STSPASYSHM YSPSHQLQRY QSKSPVHQAL QTLLHKRTNF SENIQSRSSS VDIGEAFQAL SIKTNTPFHK RAILDEVIHP RALSVAIGEA
301: DDEKSCYFSS SGITDLYNRA SSFKKAKVDN QSWSTSQYST SDVPTDSSSG SQVNINYDLE KLRIELRHIQ GMYAIAQTEA IDASRKLNEF QKLRVEEANK
401: LKQINLKEEE AKELAEQEKL KCEAAKKEAD YAMECVEREA EQRRAAESIA NREARMKEKL EKSLALPLHH YQEFTWEEIV TASSSFSEDL KIGMGSYGMV
501: YKCYLHHTPA AVKVLHSAEA HITKQFQQEL EVLSKIHHPH LLFLLGACPE RGCLVYEYME NGSLEDRLTR KNNTPPLTWF DRVRIAWEVA SALVFLHNTK
601: PKPIIHRDLK PANILLDHNL VSKIGDVGLS TMVQSDSSSA MTAYKDTSPV GTLCYIDPEY QRTGLVSTKS DVYAFGMVIL QLLTSKRAIA LAHMVEMATE
701: EDKLVELLDQ EAGEWPLEET KELAVLALKC TELRRRDRPD LKDEVLPILE RFKEVADRAR HLKCNLPPPP SHFKCPLLKE VIQDPCVAAD GYTYDRKAIE
801: SWLADNDHSP VTNLPLPHKH LLPNYALLSA IKEWKSGKH

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.