Factsheet for HORVU7Hr1G018700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU6Hr1G015480.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	HORVU6Hr1G015480.1	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G382900.1	Wheat	cytosol	77.49	68.85
TraesCS7D01G079400.2	Wheat	cytosol	78.58	68.25
HORVU7Hr1G018750.2	Barley	cytosol	74.62	66.46
TraesCS7A01G084400.4	Wheat	cytosol	69.44	60.74
Os06t0140800-01	Rice	plasma membrane	59.62	54.22
KXG19255	Sorghum	cytosol	58.25	52.91
Zm00001d045397_P001	Maize	cytosol	49.11	47.56
VIT_16s0013g01920.t01	Wine grape	cytosol	38.06	35.59
Solyc03g093450.2.1	Tomato	nucleus	37.11	33.66
PGSC0003DMT400048527	Potato	cytosol	36.97	33.54
KRH56330	Soybean	cytosol, plasma membrane, plastid	36.15	33.17
GSMUA_Achr11P...	Banana	cytosol	35.61	32.67
KRH62634	Soybean	cytosol	35.88	32.47
PGSC0003DMT400018596	Potato	cytosol	36.83	31.88
Solyc05g051610.1.1	Tomato	cytosol	36.43	31.82
GSMUA_Achr5P21060_001	Banana	cytosol	34.79	31.76
Bra013868.1-P	Field mustard	plastid	35.33	30.83
CDY34347	Canola	plastid	35.33	30.83
Bra019185.1-P	Field mustard	plastid	33.97	30.82
AT4G25160.1	Thale cress	plastid	35.06	30.78
CDY11059	Canola	plastid	33.97	30.66
CDX92680	Canola	plastid	33.7	30.57
CDX87221	Canola	cytosol	30.29	30.16
CDY42871	Canola	cytosol	33.42	29.81
Bra035920.1-P	Field mustard	cytosol	32.06	29.71
CDY16812	Canola	cytosol	32.06	29.49
CDY02134	Canola	cytosol	30.42	28.92
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	33.56	28.77
CDY02135	Canola	cytosol	33.02	28.67
Bra012943.1-P	Field mustard	cytosol	27.97	28.55
CDY23059	Canola	cytosol	33.02	28.54
CDY23058	Canola	cytosol, plastid	30.83	28.54
AT5G61560.3	Thale cress	cytosol	31.65	28.47
Bra012944.1-P	Field mustard	cytosol	31.38	28.4
CDX87220	Canola	cytosol, peroxisome, plasma membrane	31.92	28.3
CDY00464	Canola	cytosol	29.88	28.22
CDY42870	Canola	cytosol	30.42	28.16
CDY16813	Canola	cytosol	31.79	28.07
Bra022543.1-P	Field mustard	plastid	30.29	28.07
Bra029318.1-P	Field mustard	cytosol	30.29	28.03
CDY16329	Canola	plastid	30.29	28.03
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	20.19	27.98
AT5G61550.2	Thale cress	cytosol	32.74	27.91
CDY68766	Canola	cytosol, plastid	30.01	27.78
CDX99935	Canola	cytosol	28.1	27.76
AT5G51270.1	Thale cress	cytosol	30.29	27.58
CDY00461	Canola	cytosol	29.6	27.33
Bra015198.1-P	Field mustard	cytosol	28.24	27.2
CDX91574	Canola	plastid	29.47	27.07
CDY61455	Canola	cytosol	29.6	26.76
CDY00462	Canola	mitochondrion, plasma membrane	22.78	26.22
HORVU6Hr1G003590.3	Barley	cytosol	17.6	25.96
HORVU4Hr1G088650.6	Barley	plastid	29.2	25.48
HORVU3Hr1G050430.6	Barley	cytosol	23.19	22.67
Bra015196.1-P	Field mustard	cytosol	20.33	22.58
HORVU6Hr1G083440.11	Barley	cytosol	23.6	22.27
HORVU7Hr1G086580.2	Barley	cytosol	22.65	21.61
HORVU7Hr1G031830.1	Barley	cytosol	23.19	21.04
HORVU6Hr1G039290.1	Barley	mitochondrion	22.92	20.77
CDY03375	Canola	plastid	35.2	19.89
HORVU5Hr1G060580.1	Barley	cytosol	21.28	18.55
HORVU1Hr1G053270.1	Barley	cytosol	19.1	17.93
HORVU6Hr1G064130.1	Barley	plastid	22.1	16.67
HORVU2Hr1G013130.1	Barley	cytosol, plastid	17.19	15.63
HORVU0Hr1G012820.1	Barley	cytosol, mitochondrion	12.55	15.57
HORVU5Hr1G077700.15	Barley	cytosol, plasma membrane	15.28	14.25
HORVU6Hr1G064110.10	Barley	nucleus	15.42	12.42

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.40.50.620	UniProt:A0A287VL65	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G018700	EnsemblPlants:HORVU7Hr1G018700.1	InterPro:IPR000719	InterPro:IPR014729
InterPro:Kinase-like_dom_sf	PFAM:PF00582	PFAM:PF07714	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220
SUPFAM:SSF52402	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B4798D7	InterPro:UspA
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:25053398..25058772

Molecular Weight (calculated)

79807.8 Da

IEP (calculated)

8.621

GRAVY (calculated)

-0.505

Length

733 amino acids

Sequence
(BLAST)

001: ELSPHSTPAS PAASSSSSPG SSDHHRHPPH GFSEALSLIR REGGKRSILS GDDVRSSMEI EEDSGETAPE MEVSTVAIAV SGSRSSRHAL RWALDKFVPG
101: GRVLFRILHV RPPLTMVPTP MGNYIPVSQV RDEVASAYRE ELEWQARNML LPYKKMCAQR QVEAEAVLLE SDDVPAAISE EIDKFNIGKL VLGSSSRSIF
201: RRKLKGSKTA TKISECIPSF CTAYVVSKGK LSFVHSAASD RCETPRSISS STVSSPSSTS LSSAPSESAD RNGAAAVLFR QSSLLSQRDH ALANINRSAN
301: RGASPSGSAG SEISYHADTN PVSNSHSITS VAQFSSSSSG DSVYRSFRRD SFPDTSDLQA AVSEVATNLE HSHDKDDLKL QIESMKVKLR HLQKLHECAH
401: TEPVDSTQKL HNNLGIQRVA DEVKLREIDL TEEMVRRLLR RMEREEEEAA EREAQPIQSS SEHKATEGDG DHQTAGEINT GLKSAGRCLT KYNRYSWEHI
501: QAATSSFSSD LVIGKGTYGT VYKAKFQHTV AAVKVLNSLE GFGTQQLQQE LEVLGKIRHP HLLLLLGACP ERGCVVYEYM ENGSLDDALH RGNGTPPLAW
601: YDRVRVAWEV ATAVAFLHSA RPDPIIHRDL KPANILLDRN LASKVGDVGL STALLRHPGP RRRRRPAAVD DGEEHGAGGH VLLHRPGVPA DWRRVGQVGR
701: VRARRGGAAA AHGAHVAAGA RPCHGDRAGG RRR

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.