Factsheet for TraesCS7D01G079400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G085100.1
TraesCS6B01G117400.1
TraesCSU01G114000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	TraesCS6A01G085100.1	AT5G64330.1	16777956
AT4G25160.1	TraesCS6B01G117400.1	AT5G64330.1	16777956
AT4G25160.1	TraesCSU01G114000.1	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G382900.1	Wheat	cytosol	93.6	95.76
HORVU7Hr1G018700.1	Barley	cytosol, plastid	68.25	78.58
Os06t0140800-01	Rice	plasma membrane	67.65	70.84
KXG19255	Sorghum	cytosol	66.0	69.02
Zm00001d045397_P001	Maize	cytosol	57.82	64.47
VIT_16s0013g01920.t01	Wine grape	cytosol	45.14	48.6
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	28.79	45.94
GSMUA_Achr11P...	Banana	cytosol	43.36	45.81
KRH56330	Soybean	cytosol, plasma membrane, plastid	43.36	45.81
Solyc03g093450.2.1	Tomato	nucleus	43.48	45.42
PGSC0003DMT400048527	Potato	cytosol	43.48	45.42
KRH62634	Soybean	cytosol	43.01	44.81
GSMUA_Achr5P21060_001	Banana	cytosol	42.3	44.46
Solyc05g051610.1.1	Tomato	cytosol	43.84	44.1
PGSC0003DMT400018596	Potato	cytosol	43.96	43.8
CDY34347	Canola	plastid	42.42	42.62
Bra013868.1-P	Field mustard	plastid	42.42	42.62
AT4G25160.1	Thale cress	plastid	41.94	42.4
Bra019185.1-P	Field mustard	plastid	40.52	42.33
CDX92680	Canola	plastid	40.52	42.33
CDY11059	Canola	plastid	40.52	42.12
CDY00462	Canola	mitochondrion, plasma membrane	31.4	41.6
TraesCS6D01G022900.1	Wheat	cytosol	34.12	41.5
CDY00464	Canola	cytosol	38.03	41.37
Bra012943.1-P	Field mustard	cytosol	35.19	41.36
CDY02134	Canola	cytosol	37.32	40.86
CDX99935	Canola	cytosol	35.9	40.84
CDY23058	Canola	cytosol, plastid	37.56	40.03
CDY42870	Canola	cytosol	37.56	40.03
CDX87220	Canola	cytosol, peroxisome, plasma membrane	39.22	40.02
Bra012944.1-P	Field mustard	cytosol	38.27	39.88
Bra015198.1-P	Field mustard	cytosol	35.9	39.82
CDY02135	Canola	cytosol	39.81	39.81
Bra029318.1-P	Field mustard	cytosol	37.32	39.77
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	40.28	39.77
Bra022543.1-P	Field mustard	plastid	37.2	39.7
AT5G61550.2	Thale cress	cytosol	40.4	39.65
CDY16329	Canola	plastid	37.2	39.65
CDY23059	Canola	cytosol	39.81	39.62
AT5G61560.3	Thale cress	cytosol	38.15	39.51
Bra035920.1-P	Field mustard	cytosol	36.97	39.44
CDY00461	Canola	cytosol	37.09	39.42
CDY16813	Canola	cytosol	38.74	39.4
AT5G51270.1	Thale cress	cytosol	37.56	39.38
CDY16812	Canola	cytosol	37.09	39.27
CDY68766	Canola	cytosol, plastid	36.85	39.27
CDX91574	Canola	plastid	36.61	38.72
CDY42871	Canola	cytosol	37.56	38.56
Bra015196.1-P	Field mustard	cytosol	29.38	37.58
CDY61455	Canola	cytosol	35.55	36.99
TraesCS4D01G365900.1	Wheat	cytosol	34.95	36.29
CDX87221	Canola	cytosol	31.64	36.28
TraesCS7D01G359000.1	Wheat	cytosol	29.03	31.9
TraesCS6D01G172100.1	Wheat	plastid	28.55	31.26
TraesCS3D01G211800.1	Wheat	cytosol	27.01	30.81
TraesCS6D01G172000.1	Wheat	cytosol	25.47	29.66
TraesCS6D01G329000.2	Wheat	cytosol	26.9	28.63
TraesCS5D01G302100.1	Wheat	cytosol	26.18	28.59
TraesCS7D01G155500.1	Wheat	cytosol	26.54	27.79
TraesCS7D01G520100.1	Wheat	cytosol	20.02	27.66
CDY03375	Canola	plastid	42.3	27.53
TraesCS4D01G003800.1	Wheat	cytosol	23.93	27.48
TraesCS6D01G227900.1	Wheat	cytosol	28.79	26.97
TraesCS1D01G211400.1	Wheat	mitochondrion	24.88	26.82
TraesCS6D01G112900.1	Wheat	peroxisome	25.83	26.42
TraesCS5D01G212200.1	Wheat	cytosol	24.17	25.6
TraesCS5D01G210500.1	Wheat	cytosol	25.47	25.53
TraesCS2D01G076700.1	Wheat	plastid	22.75	24.43
TraesCS5D01G302000.1	Wheat	plastid	26.18	24.29
TraesCS7D01G121000.1	Wheat	cytosol	19.43	22.71
TraesCS4D01G095000.1	Wheat	cytosol	19.91	22.4
TraesCS2D01G389200.1	Wheat	cytosol	12.68	20.94
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	13.51	20.88
TraesCS6D01G227800.1	Wheat	nucleus	22.63	18.99

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00582
PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003
PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS7D01G079400	EnsemblPlants:TraesCS7D01G079400.2
InterPro:Ubox_domain	InterPro:UspA	InterPro:Znf_RING/FYVE/PHD	TIGR:cd01989	TIGR:cd16655	SEG:seg

Description

No Description!

Coordinates

chr7D:-:46838609..46843232

Molecular Weight (calculated)

92504.7 Da

IEP (calculated)

6.751

GRAVY (calculated)

-0.361

Length

844 amino acids

Sequence
(BLAST)

001: MSMEIQEEDS GETAPEMEAA GVSTVAIAVS GSRSSRHALK WALDKFVPGG RVLFRILHVR PPITMVPTPM GNYIPVSQVR DDVASAYREE LEWQARNMLL
101: PYKKMCAQRQ VEAEAVLLES DDVPAAISEE IDKFNIGKLV LGSSSRSIFR RKLKGSKTAT KISECIPSFC TAYVVSKGKL SFVRSATSDP CETPKTISSS
201: TVSSPSSRSL SSAPSECADR NGAAAVLFRQ SSLSSQHDHA LANINRRASP SGSGGSEISY HADTTLMTNS HSIASGAQLS SSSSGDSVYK SFRRDSSPDI
301: PDLQAAVSEI ATNLKHSHDQ DDLKLQIESM KVKLRHLQML HECAHTEPVD SAQKLHNNLG IQRVEHEIKL REIDLTEEMV RRLLRRMERE EEEVAEREGQ
401: AIQSSSEQKA TEGDGDHQNA GEINTGLKNA GRCLTEYNRY SWEHIQAATS SFSSDLVIGK GTYGTVYKAK FQHTVAAVKV LNSLEGFGTQ QLQQEVPYLL
501: GNTNMFFTIC SLHPELEVLG KIRHPHLLLL LGACPERGCV VYEYMENGSL DDALNHRRNG TPPLAWYDRV RVAWEVATAV AFLHSARPDP IIHRDLKPAN
601: ILLDRNLSSK VGDVGLSTAL LHHSGAGGGG GQQQSTMVRN TTPVGTFCYI DPEYQRTGAV SAKSDVYALG VVVLQLLTGR TSPLGLAHAV ETALEEDGGD
701: SFAEMLDATA GEWPPEEARE LALLAVRCAE MRRRDRPGLR EHILPALERI KDVAARAARE TKALLVRTAS SSAAPGHFLC PILQEIMEDP CVAADGYTYD
801: RKAIETWVSM KDKSPMTNLR LPSKSLIPNH SLRSAIMDWS SKNR

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.