Factsheet for TraesCS4D01G095000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G220300.1	Wheat	cytosol	91.6	98.0
TraesCS4B01G098900.1	Wheat	cytosol	94.4	94.4
TraesCS2D01G389200.1	Wheat	cytosol	43.87	64.38
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	45.6	62.64
Os03t0424200-01	Rice	cytosol	42.13	61.0
OQU92380	Sorghum	cytosol	53.2	59.82
GSMUA_Achr5P12380_001	Banana	cytosol	30.93	29.0
TraesCS5D01G302100.1	Wheat	cytosol	28.13	27.3
TraesCS7D01G121000.1	Wheat	cytosol	25.87	26.87
CDY27350	Canola	plastid	28.27	26.67
Bra019576.1-P	Field mustard	nucleus	21.87	26.37
KRH35280	Soybean	cytosol	24.53	26.1
Bra004947.1-P	Field mustard	nucleus, plastid	27.87	26.09
TraesCS1D01G211400.1	Wheat	mitochondrion	27.2	26.05
KRH00764	Soybean	plastid	30.67	26.05
GSMUA_Achr8P11510_001	Banana	cytosol	29.47	26.0
CDX74774	Canola	nucleus, plastid	27.73	25.97
VIT_15s0046g02480.t01	Wine grape	cytosol	30.4	25.88
TraesCS6D01G227900.1	Wheat	cytosol	31.07	25.86
CDY37074	Canola	plastid	28.13	25.73
KRH40448	Soybean	cytosol	30.27	25.71
AT2G45910.1	Thale cress	plastid	28.53	25.66
CDY18889	Canola	nucleus, plastid	27.47	25.62
Bra039305.1-P	Field mustard	plastid	28.27	25.57
KRG91553	Soybean	cytosol	24.4	24.8
PGSC0003DMT400040840	Potato	cytosol	26.0	24.78
Solyc03g025450.2.1	Tomato	cytosol	25.87	24.65
PGSC0003DMT400000146	Potato	nucleus	29.07	24.44
Solyc01g094660.2.1	Tomato	cytosol	29.07	24.38
VIT_16s0050g00690.t01	Wine grape	cytosol	27.2	24.29
KRH65013	Soybean	plastid	28.4	24.26
KRH48130	Soybean	plastid	28.27	24.04
TraesCS4D01G003800.1	Wheat	cytosol	23.07	23.54
TraesCS6D01G022900.1	Wheat	cytosol	21.47	23.2
TraesCS5D01G210500.1	Wheat	cytosol	24.67	21.97
AT3G49060.1	Thale cress	cytosol	23.47	21.86
TraesCS5D01G212200.1	Wheat	cytosol	23.07	21.71
CDY05898	Canola	cytosol	22.93	21.55
Bra018013.1-P	Field mustard	cytosol	23.07	21.54
CDY08105	Canola	cytosol	23.07	21.54
CDX86996	Canola	nucleus	22.67	21.49
CDY37899	Canola	cytosol	22.67	21.09
TraesCS6D01G227800.1	Wheat	nucleus	28.13	20.97
TraesCS2D01G076700.1	Wheat	plastid	21.87	20.87
TraesCS7D01G359000.1	Wheat	cytosol	21.33	20.83
TraesCS4D01G365900.1	Wheat	cytosol	22.4	20.66
TraesCS5D01G302000.1	Wheat	plastid	25.07	20.66
TraesCS6D01G172100.1	Wheat	plastid	20.8	20.23
TraesCS7D01G079400.2	Wheat	cytosol	22.4	19.91
TraesCS7D01G520100.1	Wheat	cytosol	16.13	19.8
TraesCS3D01G211800.1	Wheat	cytosol	18.67	18.92
TraesCS6D01G329000.2	Wheat	cytosol	18.93	17.91
TraesCS7D01G155500.1	Wheat	cytosol	18.53	17.25
TraesCS6D01G172000.1	Wheat	cytosol	16.13	16.69
TraesCS6D01G112900.1	Wheat	peroxisome	16.53	15.03

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.10.20.90	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	PFAM:PF12436	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF19	InterPro:Prot_kinase_dom	SMART:SM00504	SUPFAM:SSF56112
SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS4D01G095000	EnsemblPlants:TraesCS4D01G095000.1	InterPro:USP7_ICP0-binding_dom	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16655	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:70351316..70359092

Molecular Weight (calculated)

86108.7 Da

IEP (calculated)

6.681

GRAVY (calculated)

-0.328

Length

750 amino acids

Sequence
(BLAST)

001: MAQDHRTIKV ARDEDLRSQI GSGGFYFDLV DFDRVRAFQV PVDTTVILFM EELAKELGTP VKFQRLWLCQ RRQNGTRRPS RPLNSKEKKL SIGRVFSADV
101: KLFLEVFNPC SPRNLNREYL LVFLKFYDPE QTQLRYIGTL FVSCSSRPLD ILPKLRSLAG FCADEEIELY EEIKFEPNVM CEALDIHHTF TVNQIENGDI
201: ICFQKRPKSC NQHLYPSVKL FLEHVHKLTK EGRKICALEE EIVEFRRLSD LNIAANLECT QLRHERDNAI LQVDEFRGQN DLVRLQIEEA KKECDQLRHE
301: LDNAMRQVDE FRGQNDLVRL QIEESKKECN QLRHERDNAV RQIDALLNQN TVGRIQIEEA KMECSQLKHE RDNAVRQVDE LWDRNSQFIL EFRFTCLEQA
401: TEHFKDLCKI GDTEYGCVYK GIINNTTVAI KLSKSESLFQ QEVSVLRQGG RHANIVTFVG MCSEVSALVY EWLPKGNLED RILCADDTPP LSWHIRTQII
501: REVCCALLFL HSHKPNASVH GDLRPCNILI GADYRSKLYN FGMSTLFLQP GSCPPNLTSR LPYTDPEFLT IGDLTPLSDV YSLGVIILRL LTGMPPLAIT
601: KKVREAFRSD NLHLLIDKSA GDWPYTQAKQ LALLGLRCVE MTREKRPDLT EVWTVVEALV RKPPAPSCPA HFICPILQEI MNDPQMASDG FTYEAEAIRR
701: WLDGGSNRSP MTNLALPNRV LIPNRALRSS IQEYLQASVA KAVSSLNLNL

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.