Factsheet for TraesCS4B01G098900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G220300.1	Wheat	cytosol	88.8	95.01
TraesCS4D01G095000.1	Wheat	cytosol	94.4	94.4
TraesCS2B01G409700.1	Wheat	cytosol, nucleus, plasma membrane	52.8	66.0
Os03t0424200-01	Rice	cytosol	41.87	60.62
OQU92380	Sorghum	cytosol	53.07	59.67
TraesCS6B01G368900.1	Wheat	cytosol	13.2	45.83
GSMUA_Achr5P12380_001	Banana	cytosol	30.67	28.75
TraesCS5B01G294000.1	Wheat	cytosol	28.4	27.73
TraesCS5B01G202600.1	Wheat	cytosol	21.73	27.49
CDY27350	Canola	plastid	28.27	26.67
Bra019576.1-P	Field mustard	nucleus	21.73	26.21
Bra004947.1-P	Field mustard	nucleus, plastid	27.73	25.97
TraesCS1B01G222200.1	Wheat	cytosol	27.2	25.89
CDX74774	Canola	nucleus, plastid	27.6	25.84
GSMUA_Achr8P11510_001	Banana	cytosol	29.2	25.76
CDY37074	Canola	plastid	28.13	25.73
KRH00764	Soybean	plastid	30.27	25.71
AT2G45910.1	Thale cress	plastid	28.53	25.66
Bra039305.1-P	Field mustard	plastid	28.27	25.57
KRH35280	Soybean	cytosol	24.0	25.53
CDY18889	Canola	nucleus, plastid	27.33	25.5
TraesCS6B01G278900.1	Wheat	mitochondrion	30.8	25.44
VIT_15s0046g02480.t01	Wine grape	cytosol	29.87	25.43
KRH40448	Soybean	cytosol	29.73	25.25
PGSC0003DMT400040840	Potato	cytosol	25.73	24.52
PGSC0003DMT400000146	Potato	nucleus	29.07	24.44
Solyc03g025450.2.1	Tomato	cytosol	25.6	24.4
KRG91553	Soybean	cytosol	24.0	24.39
Solyc01g094660.2.1	Tomato	cytosol	29.07	24.38
VIT_16s0050g00690.t01	Wine grape	cytosol	27.07	24.17
KRH65013	Soybean	plastid	27.73	23.69
KRH48130	Soybean	plastid	27.73	23.58
TraesCS6B01G027000.1	Wheat	cytosol	21.47	23.23
TraesCS5B01G204400.1	Wheat	cytosol	24.53	21.85
AT3G49060.1	Thale cress	cytosol	23.2	21.61
TraesCS5B01G293900.1	Wheat	plastid	24.93	21.52
TraesCS4B01G350300.1	Wheat	plasma membrane	21.47	21.5
CDX86996	Canola	nucleus	22.53	21.37
CDY08105	Canola	cytosol	22.8	21.3
Bra018013.1-P	Field mustard	cytosol	22.8	21.3
CDY05898	Canola	cytosol	22.53	21.18
CDY37899	Canola	cytosol	22.53	20.97
TraesCS7B01G263700.1	Wheat	plastid	21.2	20.76
TraesCS4B01G371600.1	Wheat	cytosol	22.13	20.39
TraesCS6B01G213500.2	Wheat	plastid	20.8	20.23
TraesCS2B01G094100.1	Wheat	cytosol, plastid	20.93	19.85
TraesCS7B01G450000.2	Wheat	cytosol	15.73	18.5
TraesCS3B01G239200.2	Wheat	cytosol	18.27	18.27
TraesCS7B01G059300.1	Wheat	cytosol	18.13	16.89
TraesCS6B01G379600.1	Wheat	cytosol	18.53	16.87
TraesCS6B01G213600.1	Wheat	cytosol	15.87	16.57
TraesCS6B01G150900.1	Wheat	mitochondrion, peroxisome, plastid	16.27	14.95

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.10.20.90	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	PFAM:PF12436	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF19	InterPro:Prot_kinase_dom	SMART:SM00504	SUPFAM:SSF56112
SUPFAM:SSF57850	SUPFAM:SSF57997	EnsemblPlantsGene:TraesCS4B01G098900	EnsemblPlants:TraesCS4B01G098900.1	InterPro:USP7_ICP0-binding_dom	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	TIGR:cd16655	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4B:-:104312860..104336482

Molecular Weight (calculated)

85760.5 Da

IEP (calculated)

6.800

GRAVY (calculated)

-0.334

Length

750 amino acids

Sequence
(BLAST)

001: MAQDHRTIKV ARDEDLRSQI GSGGFYFDLV DFDRVRAFQV PVGTTVILFM EELVKELGTP VKFQRLWLCQ RRQNGTRRPS RPLNSKEKKL SIGRVFSADV
101: KLFLEVLNPC SPRNLNREYL LVFLKFYDPE QTQLRYIGTL FVSCSSRPLD ILPKLRSVAG FCADEEIELY EEIKFEPNVM CEALDIHHTF TVNQIENGDI
201: ICFQKRPKSC NQHLYPSVKL FLEHVHKLTK EGRNICALEE EIVEFRRLSD LNIAGKFECT QLRHERDNAM RQVDEFRGQN DLVHLQIEEA KKECNQLRHE
301: RDNAMRQVDE FQGQNDLVRL QIEEAKKECD QLRHERDNAV RQIDALLTQN TVGRIQIEEA KMECGQLKHE RDSAARQVDE LRDRNSQFIL EFRLTCLEQA
401: TEHFKDLCKM EDTEYGCVYK GIINNTMVAI KLSKSESLFQ QEISVLRQGG RHANIVTFVG MCSEASALVY EWLPKGNLED RIVCADGTPP LSWHNRTQII
501: GEVCCALLFL HSHKPNASVH GDLRPCNILI GANYRSKLYN FGMSTLCLQP GSCPPNLTAR LPYMDPEFLT IGDLTPLSDV YSLGVVILRL LTGMPPLAIA
601: KKVKEAFQSD NLHLLIDKSA GDWPYTQAKQ LALLGLRCVE MTREKRPDLT EVWTVVEALV RKPPAPSCPA HFICPILQEI MNDPQMASDG FTYEAEAIRR
701: WLDGGSNRSP MTNLALPNRA LIPNRALRSS IQEYLQASVA LAVRSLNLNL

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.