Factsheet for TraesCS4A01G220300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G095000.1	Wheat	cytosol	98.0	91.6
TraesCS4B01G098900.1	Wheat	cytosol	95.01	88.8
Os03t0424200-01	Rice	cytosol	44.37	60.04
OQU92380	Sorghum	cytosol	52.64	55.32
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	57.2	54.41
TraesCS6A01G338300.1	Wheat	cytosol	25.39	30.64
GSMUA_Achr5P12380_001	Banana	cytosol	32.24	28.25
TraesCS5A01G294700.1	Wheat	cytosol	29.53	26.81
TraesCS7A01G122700.1	Wheat	nucleus	27.67	26.76
TraesCS7A01G122600.1	Wheat	cytosol	26.82	26.0
CDY27350	Canola	plastid	28.96	25.53
GSMUA_Achr8P11510_001	Banana	cytosol	30.81	25.41
KRH00764	Soybean	plastid	31.53	25.03
TraesCS6A01G245500.1	Wheat	cytosol	31.95	24.97
Bra004947.1-P	Field mustard	nucleus, plastid	28.53	24.97
KRH35280	Soybean	cytosol	25.11	24.96
VIT_15s0046g02480.t01	Wine grape	cytosol	31.24	24.86
CDX74774	Canola	nucleus, plastid	28.39	24.84
KRH40448	Soybean	cytosol	31.24	24.8
Bra019576.1-P	Field mustard	nucleus	21.97	24.76
CDY37074	Canola	plastid	28.82	24.63
AT2G45910.1	Thale cress	plastid	29.24	24.58
CDY18889	Canola	nucleus, plastid	28.1	24.5
Bra039305.1-P	Field mustard	plastid	28.96	24.49
TraesCS1A01G208100.1	Wheat	mitochondrion	27.82	24.47
KRG91553	Soybean	cytosol	24.96	23.71
PGSC0003DMT400040840	Potato	cytosol	26.53	23.63
PGSC0003DMT400000146	Potato	nucleus	29.96	23.54
Solyc03g025450.2.1	Tomato	cytosol	26.39	23.51
Solyc01g094660.2.1	Tomato	cytosol	29.96	23.49
KRH65013	Soybean	plastid	29.24	23.35
KRH48130	Soybean	plastid	29.1	23.13
VIT_16s0050g00690.t01	Wine grape	cytosol	27.39	22.86
TraesCS6A01G245400.1	Wheat	nucleus	29.81	22.38
TraesCS6A01G018500.1	Wheat	cytosol	21.83	22.05
TraesCS5A01G203900.1	Wheat	cytosol	25.96	21.8
TraesCS5A01G205800.1	Wheat	cytosol	25.39	21.09
AT3G49060.1	Thale cress	cytosol	23.82	20.75
CDX86996	Canola	nucleus	22.97	20.35
CDY05898	Canola	cytosol	23.11	20.3
Bra018013.1-P	Field mustard	cytosol	23.25	20.3
CDY08105	Canola	cytosol	23.25	20.3
TraesCS5A01G294600.1	Wheat	plastid	26.25	20.2
TraesCS2A01G079300.1	Wheat	plastid	22.54	20.0
TraesCS7A01G364200.2	Wheat	cytosol	21.83	19.92
CDY37899	Canola	cytosol	22.82	19.85
TraesCS7A01G532900.1	Wheat	cytosol	16.83	19.83
TraesCS5A01G542700.1	Wheat	cytosol	22.4	19.48
TraesCS7A01G084400.4	Wheat	cytosol	22.68	18.97
TraesCS4A01G382900.1	Wheat	cytosol	22.11	18.79
TraesCS4A01G382700.4	Wheat	cytosol	21.68	18.2
TraesCS3A01G208900.1	Wheat	cytosol	18.54	17.54
TraesCS7A01G155200.1	Wheat	cytosol	18.97	16.5
TraesCS6A01G346100.2	Wheat	cytosol	18.97	16.22
TraesCS6A01G182800.1	Wheat	cytosol	16.55	15.89
TraesCS6A01G122700.2	Wheat	cytosol	16.41	13.61

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.10.20.90	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	PFAM:PF12436	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF19	InterPro:Prot_kinase_dom	SMART:SM00504	SUPFAM:SSF56112
SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS4A01G220300	EnsemblPlants:TraesCS4A01G220300.1	InterPro:USP7_ICP0-binding_dom	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16655	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:-:523447064..523455580

Molecular Weight (calculated)

80345.9 Da

IEP (calculated)

6.989

GRAVY (calculated)

-0.342

Length

701 amino acids

Sequence
(BLAST)

001: MEELAKELGT PVKFQRLWLC QRRQNGTRRP SRPLNSKEKK LSIGRVFSAD VKLFLEVLNP CSPRNLNREY LLVFLKFYDP EQTQLRYIGT LFVSCSSRPL
101: DILPKLRSLA GFCADEEIEL YEEIKFEPNV MCEALDIHHT FTVNQIENGD IICFQKRPKS CNQHLYPSVK LFLEHVHKLT KEGRKICALE EEIVEFRRLS
201: DLNIAANLEC TQLRHERDNA MLQVDEFRGQ NDLVRLQIEE AKKECNQLRH ELDNAMQQVN EFRGQNDLVR LQIEEAKKEC NQLRHERDNA VRQIDALLNQ
301: NTVGRIQIEE AKMECSQLKH ERDNAVRQVD ELWDRNSQFI LEFRFTCLEQ ATEHFKDLCK IGDTEYGCVY KGIINNTTVA IKLSKSESLF QQEVSVLRQG
401: GRHANIVTFV GMCSEVSALV YEWLPKGNLE DRILCADDTP PLSWHIRTQI IGEVCCALLF LHSHKPNASV HGDLRPCNIL IGADYRSKLY NFGMSTLFLQ
501: PGSCPPNLTA RLPYTDPEFL TIGDLTPLSD VYSLGVVILR LLTGMPPLAI AKKVREAFQS DNLHLLIDKS AGDWPYTQAK QLALLGLRCV EMTREKRPHL
601: TEVWTVVEAL VRKPPAPSCP AHFICPILQE IMNDPQMASD GFTYEAEAIR RWLDGGSNRS PMTNLALPNR VLIPNRALRS SIQEYLQASV AKAVRSLNLN
701: H

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.