Factsheet for TraesCS5A01G203900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G205800.1	Wheat	cytosol	94.25	93.25
TraesCS5B01G204400.1	Wheat	cytosol	93.29	92.52
TraesCS5D01G210500.1	Wheat	cytosol	93.29	92.52
HORVU5Hr1G060580.1	Barley	cytosol	91.74	91.08
HORVU0Hr1G012820.1	Barley	cytosol, mitochondrion	60.84	85.96
TraesCS7A01G532900.1	Wheat	cytosol	45.99	64.54
OQU85984	Sorghum	cytosol	56.53	61.78
Os02t0822900-01	Rice	cytosol	63.59	61.32
Zm00001d051875_P001	Maize	mitochondrion	58.56	55.38
GSMUA_Achr7P04450_001	Banana	cytosol	34.37	36.7
TraesCS5A01G294700.1	Wheat	cytosol	32.34	34.97
GSMUA_AchrUn_...	Banana	cytosol	32.93	34.38
TraesCS6A01G338300.1	Wheat	cytosol	23.23	33.39
CDY27350	Canola	plastid	31.62	33.21
AT2G45910.1	Thale cress	plastid	32.81	32.85
CDY18889	Canola	nucleus, plastid	31.38	32.59
Bra004947.1-P	Field mustard	nucleus, plastid	31.14	32.46
Bra039305.1-P	Field mustard	plastid	32.22	32.45
CDX74774	Canola	nucleus, plastid	30.9	32.21
KRG91553	Soybean	cytosol	28.38	32.11
CDY37074	Canola	plastid	31.38	31.95
KRH35280	Soybean	cytosol	26.35	31.21
GSMUA_Achr1P17400_001	Banana	cytosol	27.54	31.04
VIT_15s0046g02480.t01	Wine grape	cytosol	32.69	30.99
TraesCS6A01G245500.1	Wheat	cytosol	33.17	30.88
VIT_16s0050g00690.t01	Wine grape	cytosol	30.9	30.71
KRH00764	Soybean	plastid	32.22	30.46
PGSC0003DMT400000146	Potato	nucleus	32.22	30.16
KRH40448	Soybean	cytosol	31.86	30.12
Solyc01g094660.2.1	Tomato	cytosol	31.86	29.75
KRH65013	Soybean	plastid	31.14	29.61
KRH48130	Soybean	plastid	31.02	29.37
TraesCS1A01G208100.1	Wheat	mitochondrion	28.02	29.36
PGSC0003DMT400040840	Potato	cytosol	27.54	29.22
Solyc03g025450.2.1	Tomato	cytosol	27.43	29.1
Bra019576.1-P	Field mustard	nucleus	21.44	28.78
CDY05898	Canola	cytosol	26.11	27.32
CDX86996	Canola	nucleus	25.87	27.31
Bra018013.1-P	Field mustard	cytosol	26.11	27.15
CDY08105	Canola	cytosol	26.11	27.15
TraesCS5A01G294600.1	Wheat	plastid	29.46	27.0
TraesCS6A01G018500.1	Wheat	cytosol	22.28	26.8
AT3G49060.1	Thale cress	cytosol	25.63	26.58
CDY37899	Canola	cytosol	25.51	26.43
TraesCS2A01G079300.1	Wheat	plastid	24.91	26.33
TraesCS7A01G122600.1	Wheat	cytosol	22.52	26.0
TraesCS4A01G220300.1	Wheat	cytosol	21.8	25.96
TraesCS4A01G382900.1	Wheat	cytosol	25.39	25.7
TraesCS7A01G364200.2	Wheat	cytosol	22.75	24.74
TraesCS7A01G122700.1	Wheat	nucleus	21.32	24.55
TraesCS7A01G084400.4	Wheat	cytosol	24.19	24.11
TraesCS4A01G382700.4	Wheat	cytosol	23.83	23.83
TraesCS5A01G542700.1	Wheat	cytosol	22.99	23.82
TraesCS6A01G245400.1	Wheat	nucleus	26.35	23.55
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	20.0	22.66
TraesCS3A01G208900.1	Wheat	cytosol	18.44	20.78
TraesCS6A01G182800.1	Wheat	cytosol	17.25	19.73
TraesCS6A01G346100.2	Wheat	cytosol	18.44	18.78
TraesCS7A01G155200.1	Wheat	cytosol	17.96	18.61
TraesCS6A01G122700.2	Wheat	cytosol	17.37	17.16

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF122	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00504
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS5A01G203900	EnsemblPlants:TraesCS5A01G203900.1	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	TIGR:cd01989	TIGR:cd16655	SEG:seg	:	:

Description

No Description!

Coordinates

chr5A:+:413232125..413237551

Molecular Weight (calculated)

90150.2 Da

IEP (calculated)

5.292

GRAVY (calculated)

-0.400

Length

835 amino acids

Sequence
(BLAST)

001: MADAGGAGRS GEEEDGEEER GGGAAAAEVQ VYCAVGKEAG KEWRANLRWV LANFPRSRHR LVLAHVHRPP HRINMMGAWV PVSQLAEHEV AAYSKLEEER
101: ATNALDVLID ICASQRVHAR KVIVSGDDAA RGLVQLVDDH GVAELVMGAA ADRGYTRKLR APKSKKAVTV QRKANPSCRI WFVCKGNLIC TREVSEGLNI
201: GEPSTASTSP RSVASDYSRS KSSPPRLTLH GDGDGELLGM HHDSPDPMMA ASLPRTPSRD DSDNAMDFGH EGAAEGASSA VVQSLQDVEE DPPTPSHDGS
301: EEAGDMEDAL YEKLKDAIME AGSLRHEAYE ETRRRQKADR DLADASMMTR DAESSYHGEA RRRKEMEESL ARERAAMEQE TRELDAILAK IREVDDRSAE
401: FELQITDSGR VMSELDVRMS ESCSVLDALR RERRGEGPAA DEESMPAVDD GDQSVSFLRL GLSELEEATD RFDESAVIGG ARAGSRGRVY RGSLRGMSVA
501: VKMICPDVAV DEPRFGRAVD AIARARHPNI VALVGACPGA RAVVHELVPG GSLEDRLGGE APPLPWHARC GIAYRTCSAL AYLHSTATVH GDVRPLNILL
601: EDGRCSSSKL AGLGMTGLLV PPHLPSGVAL AYVEPRYLVT GDLTPQCDVH ALGVVLLRLV TGMPAFAAKK AAQKAADGST PWHEVVDASA GGWPMERATE
701: VALLGLKCCD AVETGGPRRP AELLDEALSV LEAATDATPG RTWSSLSAST AFHSGGAPSY FLCPILKEVM RDPQIAGDGF TYEAEAMKEW LGSGHDTSPM
801: TNLKLPTDEL MPNHALRAAI QEWRHTRPST FHRYQ

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.