Factsheet for PGSC0003DMT400040840

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g025450.2.1	Tomato	cytosol	94.79	94.79
Os09t0570000-01	Rice	cytosol, plastid	22.87	50.0
KRH35280	Soybean	cytosol	43.84	48.94
VIT_16s0050g00690.t01	Wine grape	cytosol	51.72	48.45
KRG91553	Soybean	cytosol	44.73	47.7
Os02t0665500-01	Rice	cytosol	25.03	46.79
TraesCS6B01G368900.1	Wheat	cytosol	12.71	46.3
Bra019576.1-P	Field mustard	nucleus	35.45	44.86
AT3G49060.1	Thale cress	cytosol	41.55	40.62
CDY05898	Canola	cytosol	40.91	40.35
Bra018013.1-P	Field mustard	cytosol	41.04	40.22
CDY08105	Canola	cytosol	40.91	40.1
CDX86996	Canola	nucleus	39.9	39.7
GSMUA_Achr5P12380_001	Banana	cytosol	39.77	39.12
CDY37899	Canola	cytosol	39.39	38.46
PGSC0003DMT400000146	Potato	nucleus	42.06	37.11
GSMUA_AchrUn_...	Banana	cytosol	37.48	36.88
GSMUA_Achr7P04450_001	Banana	cytosol	36.59	36.83
Os10t0548300-01	Rice	cytosol	30.5	36.81
KXG35135	Sorghum	cytosol	35.96	36.71
TraesCS5D01G302100.1	Wheat	cytosol	35.58	36.22
TraesCS6A01G338300.1	Wheat	cytosol	26.68	36.14
TraesCS5A01G294700.1	Wheat	cytosol	35.45	36.14
TraesCS5B01G294000.1	Wheat	cytosol	35.07	35.94
Zm00001d029829_P001	Maize	cytosol	27.83	35.49
Os03t0424200-01	Rice	cytosol	22.74	34.56
PGSC0003DMT400024693	Potato	cytosol	15.37	33.8
KXG31052	Sorghum	nucleus	38.5	33.55
KXG38967	Sorghum	cytosol	25.79	33.33
Zm00001d051397_P001	Maize	nucleus	36.34	33.18
TraesCS6D01G227900.1	Wheat	cytosol	37.36	32.63
TraesCS6A01G245500.1	Wheat	cytosol	37.1	32.55
TraesCS2B01G409700.1	Wheat	cytosol, nucleus, plasma membrane	24.78	32.5
TraesCS7D01G121000.1	Wheat	cytosol	29.73	32.41
TraesCS6B01G278900.1	Wheat	mitochondrion	37.1	32.16
Os10t0548700-01	Rice	cytosol	36.47	31.92
TraesCS7A01G122600.1	Wheat	cytosol	29.22	31.81
Os06t0163000-03	Rice	cytosol	32.53	31.8
TraesCS4D01G003800.1	Wheat	cytosol	29.61	31.7
GSMUA_Achr8P11510_001	Banana	cytosol	33.93	31.41
TraesCS1B01G222200.1	Wheat	cytosol	31.39	31.35
TraesCS7A01G122700.1	Wheat	nucleus	28.84	31.31
GSMUA_Achr1P17400_001	Banana	cytosol	29.48	31.31
TraesCS1D01G211400.1	Wheat	mitochondrion	31.13	31.29
EER96373	Sorghum	plastid	34.31	30.96
TraesCS5B01G293900.1	Wheat	plastid	34.18	30.96
Zm00001d045230_P001	Maize	cytosol	29.73	30.91
TraesCS1A01G208100.1	Wheat	mitochondrion	31.26	30.87
Os09t0569800-00	Rice	plastid	33.55	30.77
HORVU1Hr1G053270.1	Barley	cytosol	30.5	30.73
HORVU6Hr1G064130.1	Barley	plastid	37.74	30.56
EER89251	Sorghum	cytosol	30.11	30.15
OQU92380	Sorghum	cytosol	25.41	29.98
TraesCS4B01G350300.1	Wheat	plasma membrane	28.34	29.77
Zm00001d002693_P001	Maize	plastid	33.04	29.71
HORVU0Hr1G012820.1	Barley	cytosol, mitochondrion	22.24	29.61
TraesCS5D01G302000.1	Wheat	plastid	33.93	29.34
HORVU5Hr1G077700.15	Barley	cytosol, plasma membrane	29.22	29.26
TraesCS5B01G202600.1	Wheat	cytosol	21.86	29.01
TraesCS5A01G294600.1	Wheat	plastid	33.42	28.87
OQU85984	Sorghum	cytosol	27.45	28.27
TraesCS5B01G204400.1	Wheat	cytosol	29.99	28.03
HORVU5Hr1G060580.1	Barley	cytosol	29.61	27.71
TraesCS5A01G203900.1	Wheat	cytosol	29.22	27.54
Os02t0822900-01	Rice	cytosol	30.11	27.37
TraesCS5A01G205800.1	Wheat	cytosol	29.22	27.25
TraesCS5D01G212200.1	Wheat	cytosol	27.57	27.23
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	25.41	27.14
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	18.81	27.11
TraesCS5D01G210500.1	Wheat	cytosol	28.97	27.08
TraesCS6D01G227800.1	Wheat	nucleus	34.56	27.04
TraesCS6A01G245400.1	Wheat	nucleus	31.89	26.87
TraesCS7D01G520100.1	Wheat	cytosol	20.71	26.68
TraesCS4A01G220300.1	Wheat	cytosol	23.63	26.53
TraesCS2D01G389200.1	Wheat	cytosol	17.15	26.42
HORVU6Hr1G064110.10	Barley	nucleus	30.37	26.26
TraesCS7A01G532900.1	Wheat	cytosol	19.82	26.22
TraesCS4D01G095000.1	Wheat	cytosol	24.78	26.0
TraesCS4B01G098900.1	Wheat	cytosol	24.52	25.73
TraesCS7B01G450000.2	Wheat	cytosol	20.84	25.71
PGSC0003DMT400048527	Potato	cytosol	26.05	25.37
Zm00001d051875_P001	Maize	mitochondrion	28.46	25.37
PGSC0003DMT400027823	Potato	cytosol	23.76	25.1
OQU85675	Sorghum	cytosol	33.04	24.76
PGSC0003DMT400018596	Potato	cytosol	26.18	24.32
PGSC0003DMT400076836	Potato	cytosol	20.58	23.58
PGSC0003DMT400075335	Potato	nucleus	19.95	22.95
Zm00001d051399_P002	Maize	cytosol	27.06	22.28
PGSC0003DMT400033499	Potato	cytosol, nucleus, plastid	21.98	21.95
PGSC0003DMT400035586	Potato	cytosol	21.98	21.79
PGSC0003DMT400012520	Potato	cytosol	20.08	20.6
Os02t0665800-01	Rice	nucleus	12.33	17.51
Os09t0570100-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102605657	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083
InterPro:Kinase-like_dom_sf	UniProt:M1BAI3	PFAM:PF00582	PFAM:PF04564	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400015790
PGSC:PGSC0003DMG400015790	EnsemblPlants:PGSC0003DMT400040840	ScanProsite:PS00107	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003
PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850
InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI0002948F6F	InterPro:Ubox_domain	InterPro:UspA	RefSeq:XP_006353877.1	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

Receptor protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400015790]

Coordinates

chr3:+:43430508..43439991

Molecular Weight (calculated)

88995.0 Da

IEP (calculated)

6.103

GRAVY (calculated)

-0.404

Length

787 amino acids

Sequence
(BLAST)

001: MSGEDMIKAE GICDVEDTVF VAVGKNVKEG KSVLSWALKS FAGRRICVLH VHQPNHLFSS KDGKLSGAKL KQHMVKACQE LDRLRLHKLL NQYLLFITQA
101: GIQGGKVWLE INNVERGIIH IIEEHKIRWL VMGAAAETHY SKQLSELKSS KAKFVCQHAP MHCQIWFTCN ECLIQTRSMN NSLSSSLESL SSPEDNGGTK
201: MRNHVGDGYE DLNILENASS PANKIVKVEI KGDYSPVHEA HLHCATSQPL LEEGSFHGKA SSDERSRVEH AMMDAENSKQ RAFEESVKRW RAEEDAMEAI
301: RMAEVSYRLF KEKEDQRKEK EENFAKQKEG IEELKIQHDL CLNELQMIQE KKPVLESQIT ESSYAGKELE EKIIQAVELL ISFRKQRDEM QIERDNAIKE
401: VNRFRKLVQD DADEYCIKNF FSISFSDIIE ATRNFDPSSK IGEGKFGSVY KGIIHHVKVA IKMLPACGSF SDSDFQHKAE SLSRVRHPNL VTLIGICSES
501: RSLAYEFLEN GNLEDHLACC KKSRPLHWQH RIRIAVEICS ALIFVHANDP CIVHGNLRPT NILLDAKFVS KISDFGVHLL ISQTENSNND DPEASIYVDP
601: EYIDNGQFTV ESDVYSFGVI LLRLLTARPA LGIVRDVKCA LESGNLGSVL DSSAGDWPIE QAELLAYLAL SCCEKDPLNR PNMLSEVWPT IEPMRDICKP
701: HSDLNTSSQG SKGQKRIPPH FVCPIFQDVM EDPHIAADGY TYEGDAIKGW LYSGHDTSPM TNLKLDTCDL IPNYALYRAI QEWQQQF

Best Arabidopsis Sequence Match ( AT3G49060.1 )
(BLAST)

001: MGEIGGEELV LDVDETIFVA VAEDVERSKT TVLWAARNFS GKKICLLYVH RTARAASWTH KKLVGGSFKK HDVKVIERVE KPKVDELMNS YLQLLSETEI
101: QTDKLCIAGQ NIEECIVELI ARHKIKWLVM GAASDKHYSW KMTDLKSKKA IFVCKKAPDS CHIWFLCKGY LIFTRASNDD SNNRQTMPPL VQLDSDNETR
201: KSEKLESSYM RRRLRYWRSL LEQDGEKDTG QLEREKVEPR APPLFSSGSS SSFGEPVGPE PVSPELVDSD TLNTSNVEEK EREGDVARKV HRYDKAMHDI
301: GQSDRTVYGE AGKKWEEDAS TTEALCKAKA LEGLCIKESS QRKRLEELLE KEKLEVKMVI EQNNGFMKEL QMVQGRNLKL ESQMRKLQDL EKEHGEKFDT
401: AMELLKSFRQ KRDEIRIDHE NAVKEVNALR RLVKGETGES SGSEMLDYSF MEINEATNEF DPSWKLGEGK YGSVYKGNLQ HLQVAVKMLP SYGSLNHFEF
501: ERRVEILSRV RHPNLVTLMG ACPESRSLIY QYIPNGSLED CFSSENNVPA LSWESRIRIA SEICSALLFL HSNIPCIIHG NLKPSKILLD SNLVTKINDY
601: GISQLIPIDG LDKSDPHVDP HYFVSREMTL ESDIYAFGII LLQLLTRRPV SGILRDVKCA LENDNISAVL DNSAGDWPVA RGKKLANVAI RCCKKNPMNR
701: PDLAVVLRFI DRMKAPEVPS SETSSYANQN VPRRPPSHYL CPIFQEVMKD PLIAADGFTY EAEAIREWLA NGHDTSPMTN LKMEDCNLIP NHALHLAIQD
801: WQNQW

Arabidopsis Description

PUB32U-box domain-containing protein 32 [Source:UniProtKB/Swiss-Prot;Acc:Q94A51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.