Factsheet for TraesCS4D01G003800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G302000.1	Wheat	plastid	70.2	56.7
Os09t0569800-00	Rice	plastid	63.54	54.43
EER96373	Sorghum	plastid	59.86	50.46
Os09t0570000-01	Rice	cytosol, plastid	24.49	50.0
GSMUA_AchrUn_...	Banana	cytosol	37.01	34.0
TraesCS5D01G302100.1	Wheat	cytosol	35.1	33.38
VIT_16s0050g00690.t01	Wine grape	cytosol	37.14	32.5
GSMUA_Achr7P04450_001	Banana	cytosol	34.01	31.97
CDY27350	Canola	plastid	34.56	31.95
AT2G45910.1	Thale cress	plastid	36.19	31.89
KRH00764	Soybean	plastid	37.96	31.6
VIT_15s0046g02480.t01	Wine grape	cytosol	37.82	31.56
KRH40448	Soybean	cytosol	37.69	31.37
KRG91553	Soybean	cytosol	31.43	31.3
KRH48130	Soybean	plastid	37.55	31.29
KRH35280	Soybean	cytosol	29.93	31.21
CDY37074	Canola	plastid	34.69	31.1
KRH65013	Soybean	plastid	37.01	30.98
Bra004947.1-P	Field mustard	nucleus, plastid	33.74	30.96
CDX74774	Canola	nucleus, plastid	33.74	30.96
Bra039305.1-P	Field mustard	plastid	34.83	30.88
Bra019576.1-P	Field mustard	nucleus	26.12	30.87
GSMUA_Achr1P17400_001	Banana	cytosol	31.02	30.77
CDY18889	Canola	nucleus, plastid	33.33	30.47
PGSC0003DMT400000146	Potato	nucleus	36.87	30.38
Solyc01g094660.2.1	Tomato	cytosol	36.33	29.87
PGSC0003DMT400040840	Potato	cytosol	31.7	29.61
TraesCS6D01G227900.1	Wheat	cytosol	36.19	29.52
TraesCS7D01G121000.1	Wheat	cytosol	28.98	29.5
Solyc03g025450.2.1	Tomato	cytosol	31.43	29.35
AT3G49060.1	Thale cress	cytosol	31.29	28.57
CDY05898	Canola	cytosol	30.61	28.2
CDY08105	Canola	cytosol	30.61	28.02
Bra018013.1-P	Field mustard	cytosol	30.48	27.9
TraesCS1D01G211400.1	Wheat	mitochondrion	29.66	27.84
CDX86996	Canola	nucleus	29.93	27.81
CDY37899	Canola	cytosol	29.66	27.05
TraesCS6D01G022900.1	Wheat	cytosol	24.35	25.79
TraesCS4D01G365900.1	Wheat	cytosol	26.94	24.35
TraesCS5D01G212200.1	Wheat	cytosol	26.12	24.09
TraesCS6D01G172100.1	Wheat	plastid	25.17	23.99
TraesCS7D01G079400.2	Wheat	cytosol	27.48	23.93
TraesCS6D01G227800.1	Wheat	nucleus	32.52	23.76
TraesCS5D01G210500.1	Wheat	cytosol	27.21	23.75
TraesCS2D01G076700.1	Wheat	plastid	25.31	23.66
TraesCS7D01G359000.1	Wheat	cytosol	24.35	23.31
TraesCS4D01G095000.1	Wheat	cytosol	23.54	23.07
TraesCS6D01G172000.1	Wheat	cytosol	22.59	22.9
TraesCS7D01G520100.1	Wheat	cytosol	18.64	22.42
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	16.6	22.34
TraesCS2D01G389200.1	Wheat	cytosol	15.1	21.72
TraesCS3D01G211800.1	Wheat	cytosol	21.36	21.22
TraesCS7D01G155500.1	Wheat	cytosol	23.13	21.09
TraesCS6D01G329000.2	Wheat	cytosol	22.59	20.93
TraesCS6D01G112900.1	Wheat	peroxisome	19.73	17.58
Os09t0570100-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698
PANTHER:PTHR27003	PANTHER:PTHR27003:SF81	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00504	SUPFAM:SSF56112
SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4D01G003800	EnsemblPlants:TraesCS4D01G003800.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16655	:	:	:	:	:

Description

No Description!

Coordinates

chr4D:-:1640803..1645673

Molecular Weight (calculated)

82707.7 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.495

Length

735 amino acids

Sequence
(BLAST)

001: MNTLLNHYLD FCRDSLKMQA EALVTEKNST ANGIVKLIEQ NHISNLVMGT SSFSPDVQTK YTFVTRKNKA PNSKVAAIVH QQAKPYCQIF YICNETLACS
101: REATQRLIKV ESPQSGYTST DSDRSEFPAR SQSLSPRQRS FFGSTDQKAL QQESKQPVSY TYPLLASITD STETILGARG RSIHTTTSKG FSLNSCQQSF
201: RGSSLVVKDL DNMNGSLVPV SVASSKEHQH SMIETAVQRE VFGQLQLLLD DQECSKREAI EDQQKTARGL FENPMMFKAQ ENSLRGEKNE LEERLTREKV
301: GLEKERLHLY NELQKASEQR AELENKLLQT NSLMEELQRE KEHAVKQAEE MRQTNGSGAF VFGSTSTSAI VLTDFSYAEI KEATNNFDAS KKIGEGGCGS
401: VYKGFLRHTT VAIKKLNSEG ARGDQEFNDE VETLCGMRHP NLVTLIGACR EARVLVFEFL SNGSLEDCLQ CENRRETLSW RMCVRIAADI CTGLIFLHSN
501: KPKGIAHGDL KPDNVLLDAN FVCKLADFGI SRPLNVTNTT ITPYHRTNQL KGTMGYMDPV YIASGELTAQ YDVYSFGVVL MRLLTSKSPL GLPHVVEGAL
601: RKDKLQDIID TSAGEWPPKY TKELAKLALR CCRYERKERP DLGKEVWDVL EAMMNCPDDK RKPPKFLICP ITQEIMKDPH IAADGYTYEG AAIKCWFKMG
701: NKMSPVTRVS FAHHELIPNN ALRFAIQEWK KRQQP

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.