Factsheet for TraesCS6D01G227900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G245500.1	Wheat	cytosol	96.34	96.77
TraesCS6B01G278900.1	Wheat	mitochondrion	96.23	95.48
HORVU6Hr1G064130.1	Barley	plastid	91.9	85.19
Os02t0665500-01	Rice	cytosol	37.18	79.57
KXG31052	Sorghum	nucleus	68.26	68.11
Zm00001d051397_P001	Maize	nucleus	63.71	66.59
GSMUA_Achr5P12380_001	Banana	cytosol	48.17	54.25
GSMUA_Achr8P11510_001	Banana	cytosol	45.51	48.24
TraesCS1D01G211400.1	Wheat	mitochondrion	38.96	44.83
VIT_15s0046g02480.t01	Wine grape	cytosol	43.17	44.15
CDY27350	Canola	plastid	38.4	43.52
TraesCS5D01G302100.1	Wheat	cytosol	37.29	43.47
KRH40448	Soybean	cytosol	42.29	43.15
PGSC0003DMT400000146	Potato	nucleus	42.51	42.94
KRH00764	Soybean	plastid	41.95	42.81
Bra039305.1-P	Field mustard	plastid	39.18	42.58
Bra004947.1-P	Field mustard	nucleus, plastid	37.85	42.57
CDY37074	Canola	plastid	38.73	42.56
CDX74774	Canola	nucleus, plastid	37.74	42.45
AT2G45910.1	Thale cress	plastid	39.29	42.45
Solyc01g094660.2.1	Tomato	cytosol	41.84	42.17
CDY18889	Canola	nucleus, plastid	37.62	42.16
TraesCS6D01G227800.1	Wheat	nucleus	46.28	41.45
VIT_16s0050g00690.t01	Wine grape	cytosol	38.18	40.95
KRH48130	Soybean	plastid	39.62	40.48
KRH65013	Soybean	plastid	38.62	39.64
KRH35280	Soybean	cytosol	30.41	38.87
KRG91553	Soybean	cytosol	31.52	38.48
PGSC0003DMT400040840	Potato	cytosol	32.63	37.36
Solyc03g025450.2.1	Tomato	cytosol	32.3	36.98
Os02t0665800-01	Rice	nucleus	22.64	36.82
TraesCS4D01G003800.1	Wheat	cytosol	29.52	36.19
Bra019576.1-P	Field mustard	nucleus	24.53	35.53
TraesCS7D01G121000.1	Wheat	cytosol	28.41	35.46
TraesCS5D01G302000.1	Wheat	plastid	34.96	34.62
AT3G49060.1	Thale cress	cytosol	30.08	33.66
CDY05898	Canola	cytosol	29.63	33.46
Bra018013.1-P	Field mustard	cytosol	29.74	33.37
CDY08105	Canola	cytosol	29.74	33.37
TraesCS7D01G520100.1	Wheat	cytosol	22.53	33.22
CDX86996	Canola	nucleus	29.08	33.12
TraesCS5D01G212200.1	Wheat	cytosol	29.19	33.0
TraesCS5D01G210500.1	Wheat	cytosol	30.41	32.54
CDY37899	Canola	cytosol	28.63	32.01
TraesCS6D01G022900.1	Wheat	cytosol	24.2	31.41
TraesCS4D01G095000.1	Wheat	cytosol	25.86	31.07
TraesCS6D01G172100.1	Wheat	plastid	25.64	29.96
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	18.09	29.85
TraesCS2D01G389200.1	Wheat	cytosol	16.76	29.55
TraesCS7D01G359000.1	Wheat	cytosol	24.86	29.17
TraesCS2D01G076700.1	Wheat	plastid	25.31	29.01
TraesCS7D01G079400.2	Wheat	cytosol	26.97	28.79
TraesCS4D01G365900.1	Wheat	cytosol	25.97	28.78
TraesCS6D01G172000.1	Wheat	cytosol	22.53	28.0
TraesCS3D01G211800.1	Wheat	cytosol	22.75	27.7
TraesCS7D01G155500.1	Wheat	cytosol	24.31	27.17
TraesCS6D01G329000.2	Wheat	cytosol	22.64	25.73
TraesCS6D01G112900.1	Wheat	peroxisome	21.09	23.03

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF56112
SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G227900	EnsemblPlants:TraesCS6D01G227900.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd01989	TIGR:cd16655	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6D:-:318990408..319001508

Molecular Weight (calculated)

100785.0 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.487

Length

901 amino acids

Sequence
(BLAST)

001: MEAHRRWDTS GSGSRYSFRT SVSSLADFGG EIVEAEARRA AVDRVFVAVP GEVKHGRSAL QWALHNLAKD GAQVVVAHVH RPAQMIPMMG AKMHYTRLDP
101: EQVKDYRKQE LEKALERLEE YVVLCTMLKV SCEKIIIEKD DVAKGLEELI ALHGITKLVM GAAADKHYSK KMKRPKSKTA LGLMEAEASP CKIWFTCKGQ
201: LICTREANTT IPMIPPSPAS TVASTLSASS ISSRMRSITI HHSESEAPSS NGSPQQNLNR SRTEVMRHHS RGAGGTPPQL FEPLELNANA RPTRTPLSSM
301: DSWDEFGRRS QSSWYNLSRN DDAISVSESA THHPMHESDD DHFSSPFHEL ENPGADAEMY GRLEEALRET QESKKEVFEE STKRRKAELD LLSALQKAKE
401: LEKLYHHEIR QRKTIEETLV RQAQELEATK IQCDTIYDQL HDAEEQKAVL EQRMTEMESA LRDGEEKLAT SKCLLEALQA DKEKLQQERD AAATAAAELR
501: QKSEQRISMA TEALNTEFSA VELEQATRSF DEVLKIGEGG FGCVYKGSLR STTVAIKLLH PKSLQGQSEF NQEVAVLGRV RHPNLVALIG SCREAFGLVY
601: EYLPNGSLED RLACANDTPP LTWQVRTRII YEMCSALTFL HSNKPHPVVH GDLKPANILL DANLVSKLGD FGICRLLTQS GTSTAATTLY RTTTPRGTFA
701: YMDPEFLSSG ELTPRSDVYS LGIIILQLLT GRRPQKIAEV VEDAVEKGEL HTVLDPSAGA WPFVQANQLA HLGLRCAEMS RRRRPDLARE VWTVVEPLMK
801: AASLTARRPT FAASSALPDE ASTPSYFVCP IFQEMMNDPH IAADGFTYEA EAIRGWLDSG HDTSPMTNLK LAHRELTPNR GLRSVILEWQ QQHRQYHEDW
901: R

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.