CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051397_P001	Maize	nucleus	75.86	79.47
Os02t0665500-01	Rice	cytosol	35.88	76.96
TraesCS6D01G227900.1	Wheat	cytosol	68.11	68.26
TraesCS6A01G245500.1	Wheat	cytosol	67.77	68.23
TraesCS6B01G278900.1	Wheat	mitochondrion	67.22	66.85
HORVU6Hr1G064130.1	Barley	plastid	67.0	62.24
GSMUA_Achr5P12380_001	Banana	cytosol	47.84	54.0
GSMUA_Achr8P11510_001	Banana	cytosol	44.52	47.29
VIT_15s0046g02480.t01	Wine grape	cytosol	43.3	44.38
KXG35135	Sorghum	cytosol	37.65	44.1
KRH40448	Soybean	cytosol	42.75	43.71
KXG38967	Sorghum	cytosol	29.24	43.35
CDY27350	Canola	plastid	37.98	43.14
PGSC0003DMT400000146	Potato	nucleus	42.52	43.05
KRH00764	Soybean	plastid	42.08	43.04
CDX74774	Canola	nucleus, plastid	37.87	42.7
Bra004947.1-P	Field mustard	nucleus, plastid	37.76	42.57
AT2G45910.1	Thale cress	plastid	39.2	42.45
Solyc01g094660.2.1	Tomato	cytosol	41.97	42.39
OQU85675	Sorghum	cytosol	49.28	42.38
CDY18889	Canola	nucleus, plastid	37.65	42.29
CDY37074	Canola	plastid	38.21	42.07
Bra039305.1-P	Field mustard	plastid	38.54	41.98
VIT_16s0050g00690.t01	Wine grape	cytosol	38.54	41.43
KRH48130	Soybean	plastid	39.76	40.7
KRH65013	Soybean	plastid	39.31	40.43
KRH35280	Soybean	cytosol	30.56	39.15
PGSC0003DMT400040840	Potato	cytosol	33.55	38.5
KRG91553	Soybean	cytosol	31.45	38.48
Solyc03g025450.2.1	Tomato	cytosol	33.33	38.25
EER89251	Sorghum	cytosol	33.11	38.04
EER96373	Sorghum	plastid	34.99	36.24
Bra019576.1-P	Field mustard	nucleus	24.58	35.69
CDY05898	Canola	cytosol	30.68	34.71
OQU85984	Sorghum	cytosol	29.24	34.55
AT3G49060.1	Thale cress	cytosol	30.79	34.53
Bra018013.1-P	Field mustard	cytosol	30.68	34.5
CDY08105	Canola	cytosol	30.68	34.5
Os02t0665800-01	Rice	nucleus	21.15	34.48
CDX86996	Canola	nucleus	29.57	33.75
OQU92380	Sorghum	cytosol	24.81	33.58
CDY37899	Canola	cytosol	29.24	32.75
KXG26353	Sorghum	plastid	27.46	30.24
KXG19255	Sorghum	cytosol	26.8	29.99
OQU84639	Sorghum	plastid	24.58	28.83
EER89974	Sorghum	cytosol, plastid	24.36	28.1
KXG29810	Sorghum	cytosol	21.71	27.18
EER89364	Sorghum	nucleus	23.81	27.01
EES05920	Sorghum	cytosol	22.7	26.25
KXG32775	Sorghum	cytosol	21.93	26.12
KXG35594	Sorghum	cytosol	24.92	26.07
KXG29487	Sorghum	cytosol	20.93	23.11

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	UniProt:A0A194YS83
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729	EnsemblPlants:KXG31052	ProteinID:KXG31052	ProteinID:KXG31052.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold
SMART:SM00220	SMART:SM00504	EnsemblPlantsGene:SORBI_3004G289000	SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0007F2CD4D	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:63041050..63045420

Molecular Weight (calculated)

100006.0 Da

IEP (calculated)

6.486

GRAVY (calculated)

-0.473

Length

903 amino acids

Sequence
(BLAST)

001: MEGAGTGSAA HRRWDTSSSS QHSFRTSVSS AAEITGGDEI MDAILPAPPV ENRVFVAVPE DVKHGKNTLL WALENLAKDG SGSGVVIAHV HCPAQMIPMM
101: GGKVHYTMVN AKQVNDHRKK VRARAEEKLN EYVKICIRQK VSCEKIIIDN EDVAKGLEEL IALHGITRLV MGAAADKHHS KKMKSLKSKT ALRLTEAAAS
201: SCKIWFTCKG HLICTREANT TVPAIPPSPA FTVASGSSVT SVGSRLRSMA ISHSESDASS SNGSPRHDQI RSRTEVGLYP SLESISTSSG LYESCGRPTR
301: TSRSSIDSWD GFGRRSQNSW HDQSRNDDAV TISGSAMPHE MQEPDDENFS SPSHELENPG LDANANIYRR LTEALSEAER YKREAHEESA KRLRAELDMA
401: SALGNVYESY QHEIRQRKTI EETLASKEQE IEEMKRQHDV TSNELNDVKE QKLVLEQQIT EMASAIKDYE EKMSANEYLT QMLKTDNDKL RQERDAAVTE
501: AEGLRQKNDN KISAPLPAET LNTEFSYFEL EQATEGFDER LKIGEGGFGS VYKGFLRNTI VAVKLLNPQS MQGQSEFNQE VAVLGRVRHP NLVTLIGACR
601: EAFGLVYEFL PNGSLEDRLA CTDNTPPLTW QVRTKIICEM CSALIFLHSN KPHPVVHGDL KPGNILLNAN FVSKLGDFGI CRLLSQSSTT ITTTRAITTK
701: LHRTTTPKGT FAYMDPEFLS TGELTPRSDV YSFGIIILRL LTGRPPKSIA EVVEDAVERG QLHAVLDPTA GDWPFVQANQ LAHIGLRCAE MSRRRRPDLA
801: GEVWKVVEPL MKAASVDAGG WPSSSLDDAH APSYFVCPIF QEVMSDPHIA ADGFTYEAEA ITGWFDSGRD TSPMTNLKLD HCELTPNRAL RSAILQWQQQ
901: RRR

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.