CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020416_P002	Maize	cytosol	88.41	85.35
Os10t0561500-01	Rice	cytosol	64.31	70.97
KXG19255	Sorghum	cytosol	39.51	42.26
OQU84639	Sorghum	plastid	28.39	31.82
EER89974	Sorghum	cytosol, plastid	28.39	31.29
KXG38967	Sorghum	cytosol	21.44	30.38
KXG35135	Sorghum	cytosol	26.88	30.09
KXG29810	Sorghum	cytosol	25.03	29.96
KXG32775	Sorghum	cytosol	25.61	29.16
EES05920	Sorghum	cytosol	25.49	28.17
KXG26353	Sorghum	plastid	26.07	27.44
EER96373	Sorghum	plastid	27.46	27.18
EER89364	Sorghum	nucleus	24.45	26.51
KXG29487	Sorghum	cytosol	24.91	26.28
KXG31052	Sorghum	nucleus	26.07	24.92
EER89251	Sorghum	cytosol	22.6	24.81
OQU92380	Sorghum	cytosol	18.66	24.14
OQU85984	Sorghum	cytosol	20.16	22.77
OQU85675	Sorghum	cytosol	22.83	18.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	UniProt:A0A1B6QCF5
ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729	EnsemblPlants:KXG35594	ProteinID:KXG35594
ProteinID:KXG35594.1	ProteinID:KXG35595.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00582	PFAM:PF04564
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF125
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	EnsemblPlantsGene:SORBI_3002G196800
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00081AB407	InterPro:Ubox_domain
InterPro:UspA	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:58593486..58602167

Molecular Weight (calculated)

94924.6 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.289

Length

863 amino acids

Sequence
(BLAST)

001: MPTQEETVVT ESSPSSDPPI TIGLAVSSSK SSKYAVRWAL KNFGTRKRTR FMLIHVRQKV TLVPTPMGNY VPVDQVRDDI ASAYEKEVEC EAQNMLLMYR
101: NMCDGKVEAE VLVVKGDDVA ETISGVVLAC QIHKLFVGVS SQGNFIRKSK GTRTSSRICK CVPSFCMVYA ISKGGLSMVY SPGSESDNSS KILQVNESSN
201: SELSSDKSSV SDITPSAISR SNSLGGNLDS LPSAHHNWPH SLQEHLSGST STSTVDAQSI SPCTDGSSNL RISEKSPTVS RALQELMLSE DEASTPCASG
301: QISASTNLPV SGKALTIKSS LQGLMLSEDK ASTPCASGQI SGSSNLPITD KAPTVSNALQ ELMLSEDKDN VNFELEKLRI KLGHMKGVCK LVQDESTSAS
401: QQMIDLVERR AQEEARLLEV HYRINTTIEA AQKEREQRYA VEAQARHVRD LAKEEALKKQ NLQLRASREA DNMQKLEKLL ESGGKSYIIF TWEEIESATS
501: SFSEALKIGS GANGTVYKGK IHQKTVAIKV LKSDDSRITK HFEQELEILG KTRHRHLLLL LGACLDRACL VYEYMENGSL EDRLQCKGGT APLPWYHRFR
601: IAWEISLALV YLHSSKPKPI IHRDLKPANI LLDSNFTSKI GDAGLATLLP LRDASSTHTI QKATDLVGTL FYMDPEYQRT GQVSAKSDVY ALGMVFLQLL
701: TANSPMGLAD TVERAVEEDR LIDILDQHAG KWPVREAHEL TQLGLRCLEM RSKDRPDLKS KVLVVLERLN NMASTACDSV QAVPVAPPSH FICPILKRVM
801: QNPCIASDGY SYERVAIEMW LHENDVSPLT KTRLPDKNLV PNHALLCLIN CWKGEAGATG LIC

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.