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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G368900.1 Wheat cytosol 23.61 84.26
TraesCS6A01G338300.1 Wheat cytosol 56.81 75.39
TraesCS5D01G302100.1 Wheat cytosol 74.06 73.87
TraesCS5A01G294700.1 Wheat cytosol 73.67 73.58
TraesCS5B01G294000.1 Wheat cytosol 73.28 73.57
CDY27350 Canola plastid 43.71 42.39
Bra004947.1-P Field mustard nucleus, plastid 43.45 41.82
CDX74774 Canola nucleus, plastid 43.45 41.82
GSMUA_Achr7P04450_001 Banana cytosol 42.15 41.56
CDY18889 Canola nucleus, plastid 43.32 41.54
KRH00764 Soybean plastid 47.47 41.45
GSMUA_AchrUn_... Banana cytosol 42.93 41.38
KRH40448 Soybean cytosol 47.08 41.11
CDY37074 Canola plastid 43.71 41.1
AT2G45910.1 Thale cress plastid 44.36 41.01
Bra039305.1-P Field mustard plastid 43.84 40.77
VIT_15s0046g02480.t01 Wine grape cytosol 45.66 39.95
KRH48130 Soybean plastid 44.88 39.23
KRH65013 Soybean plastid 44.36 38.95
KXG38967 Sorghum cytosol 30.35 38.42
KRG91553 Soybean cytosol 36.32 37.94
GSMUA_Achr1P17400_001 Banana cytosol 36.45 37.92
PGSC0003DMT400000146 Potato nucleus 43.84 37.89
KXG31052 Sorghum nucleus 44.1 37.65
VIT_16s0050g00690.t01 Wine grape cytosol 40.99 37.62
Solyc01g094660.2.1 Tomato cytosol 43.45 37.47
KRH35280 Soybean cytosol 33.98 37.16
PGSC0003DMT400040840 Potato cytosol 36.71 35.96
EER96373 Sorghum plastid 40.47 35.78
Solyc03g025450.2.1 Tomato cytosol 36.45 35.71
Bra019576.1-P Field mustard nucleus 28.53 35.37
EER89251 Sorghum cytosol 35.28 34.61
OQU85984 Sorghum cytosol 32.94 33.25
AT3G49060.1 Thale cress cytosol 34.5 33.04
CDY05898 Canola cytosol 33.85 32.71
CDY08105 Canola cytosol 33.98 32.63
Bra018013.1-P Field mustard cytosol 33.85 32.5
CDX86996 Canola nucleus 33.33 32.49
CDY37899 Canola cytosol 32.81 31.39
KXG26353 Sorghum plastid 32.81 30.85
OQU92380 Sorghum cytosol 26.59 30.73
KXG19255 Sorghum cytosol 31.65 30.24
OQU85675 Sorghum cytosol 39.3 28.86
OQU84639 Sorghum plastid 28.02 28.05
EER89974 Sorghum cytosol, plastid 27.63 27.2
KXG35594 Sorghum cytosol 30.09 26.88
KXG29810 Sorghum cytosol 24.38 26.07
EES05920 Sorghum cytosol 24.38 24.07
EER89364 Sorghum nucleus 24.51 23.74
KXG32775 Sorghum cytosol 22.44 22.82
KXG29487 Sorghum cytosol 23.74 22.37
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.39.2Gene3D:3.30.200.20Gene3D:3.30.40.10Gene3D:3.40.50.620UniProt:A0A1B6QB38
ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004842
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0006950GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016567GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR003613InterPro:IPR013083InterPro:IPR014729EnsemblPlants:KXG35135ProteinID:KXG35135
ProteinID:KXG35135.1InterPro:Kinase-like_dom_sfPFAM:PF00582PFAM:PF04564PFAM:PF07714ScanProsite:PS00108
PFscan:PS50011PFscan:PS51698PANTHER:PTHR27003PANTHER:PTHR27003:SF74InterPro:Prot_kinase_domInterPro:Rossmann-like_a/b/a_fold
SMART:SM00220SMART:SM00504EnsemblPlantsGene:SORBI_3002G137000SUPFAM:SSF52402SUPFAM:SSF56112SUPFAM:SSF57850
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI00081AE79BInterPro:Ubox_domainInterPro:UspAInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:+:20853000..20857908
Molecular Weight (calculated)
87023.9 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.387
Length
771 amino acids
Sequence
(BLAST)
001: MATATAGSSS PPTPHADDSP EPSSPAERVY VAVGREVAES RATLLWALHK FPQGAFVLLH VYSPPKFLPF LGARIPAAQV REQELAAHKE MELQRISDSL
101: DQYLLLCAQE KGHAEKLLVE SDDVAQGLVD LISEHHVTEL VMGAAADKHY TKKMKILKSR KARFVEHQAD PLCKIWFICK GTLVYRRKAV QLSHEEMQEC
201: RQSSGVTHNS VEKSGSLSEM WCVANTWLCK SIREPQIERT TSDPSYISSK DNIKESYDSC ENFHHFLKKL ESARREAYEE KCRREEVERE LYEAFQKAQA
301: SEILYLRELK QKNELEEKLT TIMEEIESLT IRTDELCLKL QGERERRIVL EKRGAHSDRI IKDLMLQRDK ALREAEKLRA KKGESTATAE GTMHITEFSY
401: SEIKEATNDF DHSMKIGESV YGSVYKGFLR HTNIAIKKLN PESTQTQSQF NQEVEILSRV RHPNLVTLIG ACKDAQALVY EYMPNGSLDD RLACKDNSKP
501: LSWQLRTRIA SNICSALIFL HSNKPHSIVH SDLKASNILL DGNNIAKLSG FGVCQILSDQ FKATTTLYRY THPKGSFVYI DPEYLISGDL TPLSDVYSFG
601: IVLLRLLTGR SGFGLLKEVQ QAVEKGCLQA ILDSSAGGWP AIYAEQLAQV GLRCCEIRRK HRPDLQTEVW AVLEPMLNSA STMLCSLSFK SVSEDLGGVP
701: SYFICPIVQD VMRDPLIAAD GFTYEAEAIR EWLDSGHRTS PMTNLELSHR DLLPNHALRS AIQEWLQTNG D
Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)
001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL
Arabidopsis Description
PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.