CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G293900.1	Wheat	plastid	69.95	70.2
Os09t0569800-00	Rice	plastid	67.89	69.0
TraesCS5D01G302000.1	Wheat	plastid	70.18	67.25
TraesCS5A01G294600.1	Wheat	plastid	69.84	66.85
HORVU5Hr1G077700.15	Barley	cytosol, plasma membrane	55.62	61.7
TraesCS4D01G003800.1	Wheat	cytosol	50.46	59.86
TraesCS4B01G350300.1	Wheat	plasma membrane	50.8	59.15
Os09t0570000-01	Rice	cytosol, plastid	21.79	52.78
KXG35135	Sorghum	cytosol	35.78	40.47
GSMUA_AchrUn_...	Banana	cytosol	36.7	40.0
KRH40448	Soybean	cytosol	40.25	39.75
GSMUA_Achr7P04450_001	Banana	cytosol	35.55	39.64
KRH00764	Soybean	plastid	40.14	39.64
CDX74774	Canola	nucleus, plastid	35.44	38.58
Bra004947.1-P	Field mustard	nucleus, plastid	35.44	38.58
CDY27350	Canola	plastid	35.09	38.49
AT2G45910.1	Thale cress	plastid	36.7	38.37
VIT_15s0046g02480.t01	Wine grape	cytosol	38.76	38.37
VIT_16s0050g00690.t01	Wine grape	cytosol	36.93	38.33
GSMUA_Achr1P17400_001	Banana	cytosol	32.57	38.33
KRH48130	Soybean	plastid	38.53	38.1
CDY18889	Canola	nucleus, plastid	34.98	37.94
CDY37074	Canola	plastid	35.55	37.8
Bra039305.1-P	Field mustard	plastid	35.78	37.64
KRH65013	Soybean	plastid	37.84	37.59
PGSC0003DMT400000146	Potato	nucleus	37.5	36.66
Solyc01g094660.2.1	Tomato	cytosol	37.27	36.35
KXG38967	Sorghum	cytosol	25.23	36.12
KRG91553	Soybean	cytosol	29.93	35.37
KRH35280	Soybean	cytosol	28.44	35.18
KXG31052	Sorghum	nucleus	36.24	34.99
PGSC0003DMT400040840	Potato	cytosol	30.96	34.31
Solyc03g025450.2.1	Tomato	cytosol	30.73	34.05
Bra019576.1-P	Field mustard	nucleus	24.2	33.92
EER89251	Sorghum	cytosol	30.05	33.33
OQU85984	Sorghum	cytosol	28.1	32.07
AT3G49060.1	Thale cress	cytosol	29.01	31.43
CDY05898	Canola	cytosol	28.33	30.95
Bra018013.1-P	Field mustard	cytosol	28.44	30.88
CDY08105	Canola	cytosol	28.44	30.88
CDX86996	Canola	nucleus	27.87	30.72
CDY37899	Canola	cytosol	27.52	29.78
KXG19255	Sorghum	cytosol	27.18	29.37
OQU84639	Sorghum	plastid	25.92	29.35
KXG26353	Sorghum	plastid	27.52	29.27
OQU92380	Sorghum	cytosol	21.56	28.19
EER89974	Sorghum	cytosol, plastid	25.23	28.1
OQU85675	Sorghum	cytosol	33.26	27.62
KXG35594	Sorghum	cytosol	27.18	27.46
KXG29810	Sorghum	cytosol	22.71	27.46
EER89364	Sorghum	nucleus	22.59	24.75
EES05920	Sorghum	cytosol	21.79	24.33
KXG32775	Sorghum	cytosol	21.1	24.27
KXG29487	Sorghum	cytosol	19.15	20.42
Os09t0570100-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	EntrezGene:8061709
InterPro:AH/BAR_dom_sf	UniProt:C5X6K0	ncoils:Coil	EnsemblPlants:EER96373	ProteinID:EER96373	ProteinID:EER96373.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:IPR027267	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF81	InterPro:Prot_kinase_dom
InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	EnsemblPlantsGene:SORBI_3002G136800	SUPFAM:SSF103657	SUPFAM:SSF52402
SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A83604	InterPro:Ubox_domain	RefSeq:XP_002459852.1
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:20707253..20713928

Molecular Weight (calculated)

96884.3 Da

IEP (calculated)

6.580

GRAVY (calculated)

-0.516

Length

872 amino acids

Sequence
(BLAST)

001: MAVVSARGSP NSFPSPRLPP SPQPRPDAER MFMRGGSSRS TGTSGSLRSA SLRDIDEEAA VVVADDDGGG GKLYVAVGKD RKDGKSNVSA AQSLGLVGGD
101: LKLVLLHVHQ PADRIMNGLG CKVLASQLEE KELKAYRQIE QEEMDRLLNT YVNHCRSYLK VEAETLIIEK NNVANGIVEL INQHRITKLV MGMSSFSTKR
201: KVPKSKVAAI VHQQAKPYCQ IFFICKGSLG CTRDANLGCT KADSPRSSSA STLSDETEIP TRSVSLPPGH PGYRGSPDES FLPRRSHSVS YPSSGLITNV
301: ERMSPIAPQS IHVKTTYCSP NSSLPSNEGS SSSSLKDSDS LDGSPVPASI ISYEEQQMSM VENGMHNEVF ERLQQARTEL ERSRKEACEG RQKAERDLFE
401: ASMKSKAREN SLHKEKKEVE EKLTKEKSIL EKEKLQIYNE LQKANEQRAQ LENKLLQTNS LLEELQQLQG ELQREKEDAL REVEEMCKLY CNRNFASAGE
501: VSLTEFSYSE IEEATNNFDG SREIGQGGCA SVYRGFLRHT TVAIKKFNRE GAVGEKEFND EVEILCRMRH PNLATLIGLC RDPKVLVYEF MPNGSLEDRL
601: QCKLHTEPLP WRMRVRIAAD ICTALIFLHS NKPKSIAHGD LKPDNVLLDA NFVGKLGDFG ISRSLDLTNT TVTPYHRTDH IKGTLGYMDP GYIASGELTA
701: QYDVYSFGVV LLRLLTGKSP LGLQSEVEAS MSSGVLHEIL DASAGEWPLE HAEELARLAL KCCRLNRKDR PDLAKEAWGI LQAMMNEPPP SSAHPPKAEA
801: PSYFICPMTQ EIMRDPHIAA DGFTYEGDAI KDWIQRGHTM SPMTYLNLSH HELIPNNALR FAIQEWQMGQ QQ

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.