Factsheet for TraesCS5B01G293900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G302000.1	Wheat	plastid	96.32	91.98
TraesCS5A01G294600.1	Wheat	plastid	96.09	91.66
HORVU5Hr1G077700.15	Barley	cytosol, plasma membrane	72.5	80.15
Os09t0569800-00	Rice	plastid	71.58	72.49
EER96373	Sorghum	plastid	70.2	69.95
TraesCS4B01G350300.1	Wheat	plasma membrane	58.69	68.09
Os09t0570000-01	Rice	cytosol, plastid	20.94	50.56
TraesCS6B01G368900.1	Wheat	cytosol	11.05	44.44
GSMUA_AchrUn_...	Banana	cytosol	36.71	39.88
KRH40448	Soybean	cytosol	38.9	38.28
KRH00764	Soybean	plastid	38.78	38.17
VIT_15s0046g02480.t01	Wine grape	cytosol	38.67	38.14
TraesCS5B01G294000.1	Wheat	cytosol	33.6	38.02
KRH48130	Soybean	plastid	38.55	37.98
GSMUA_Achr7P04450_001	Banana	cytosol	34.06	37.85
AT2G45910.1	Thale cress	plastid	36.25	37.77
CDY27350	Canola	plastid	34.52	37.74
KRH65013	Soybean	plastid	37.97	37.59
CDX74774	Canola	nucleus, plastid	34.64	37.58
Bra004947.1-P	Field mustard	nucleus, plastid	34.52	37.45
CDY37074	Canola	plastid	34.75	36.83
CDY18889	Canola	nucleus, plastid	34.06	36.82
Bra039305.1-P	Field mustard	plastid	34.98	36.67
VIT_16s0050g00690.t01	Wine grape	cytosol	35.33	36.55
GSMUA_Achr1P17400_001	Banana	cytosol	31.07	36.44
PGSC0003DMT400000146	Potato	nucleus	36.25	35.31
KRH35280	Soybean	cytosol	28.42	35.04
KRG91553	Soybean	cytosol	29.57	34.82
TraesCS6B01G278900.1	Wheat	mitochondrion	36.36	34.8
Solyc01g094660.2.1	Tomato	cytosol	35.79	34.79
PGSC0003DMT400040840	Potato	cytosol	30.96	34.18
Bra019576.1-P	Field mustard	nucleus	24.28	33.92
Solyc03g025450.2.1	Tomato	cytosol	30.49	33.67
TraesCS1B01G222200.1	Wheat	cytosol	29.46	32.49
AT3G49060.1	Thale cress	cytosol	28.88	31.18
CDY05898	Canola	cytosol	27.85	30.33
TraesCS5B01G202600.1	Wheat	cytosol	20.6	30.19
Bra018013.1-P	Field mustard	cytosol	27.85	30.14
CDY08105	Canola	cytosol	27.85	30.14
CDX86996	Canola	nucleus	27.39	30.09
TraesCS5B01G204400.1	Wheat	cytosol	28.77	29.69
TraesCS2B01G409700.1	Wheat	cytosol, nucleus, plasma membrane	20.25	29.33
CDY37899	Canola	cytosol	26.7	28.78
TraesCS2B01G094100.1	Wheat	cytosol, plastid	26.01	28.57
TraesCS6B01G027000.1	Wheat	cytosol	22.32	27.99
TraesCS6B01G213500.2	Wheat	plastid	24.51	27.63
TraesCS7B01G450000.2	Wheat	cytosol	19.79	26.96
TraesCS7B01G263700.1	Wheat	plastid	23.36	26.5
TraesCS4B01G371600.1	Wheat	cytosol	24.28	25.92
TraesCS6B01G213600.1	Wheat	cytosol	21.4	25.91
TraesCS4B01G098900.1	Wheat	cytosol	21.52	24.93
TraesCS7B01G059300.1	Wheat	cytosol	22.55	24.35
TraesCS3B01G239200.2	Wheat	cytosol	20.6	23.87
TraesCS6B01G379600.1	Wheat	cytosol	21.17	22.33
TraesCS6B01G150900.1	Wheat	mitochondrion, peroxisome, plastid	18.41	19.61
Os09t0570100-01	Rice	cytosol, nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613
InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF81	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold
SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS
EnsemblPlantsGene:TraesCS5B01G293900	EnsemblPlants:TraesCS5B01G293900.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	TIGR:cd01989	TIGR:cd16655
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:478476296..478480827

Molecular Weight (calculated)

96854.2 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.493

Length

869 amino acids

Sequence
(BLAST)

001: MAVVSRARAS LPSPSSSPLT AFSPRSPQPE VAERMFTRGG SGRSSSSSAS GANRSASLRE IDEEAAILHD AYDDDGVGKL YVAVGKDVKD GRSNLVWAAR
101: NLLAGDPKLV LLHVHQPADR IMIGLCKVPA SQVEEKELKA YRKIEKEEMN TLLNQYLNFC RVSLKMQAET LVIEKNSPAN GIIELIDQNR ITKLVMGTSS
201: FSVKRKVPKS KVAASVHLQA KPYCQIFYIC KEALGCSREA TELCAKVESP RSSFASTISD QPELTPRSLS LPPGHPGLLA STGQQPLPRR SNSVSYPLSG
301: LIADVEIMSP ARRQSIDMTP TDSSPSSSQQ STGGSSLGLR DLDSMDGSPV PVSVASSEEH QHSTVSYVEI REMFEQLHRV RNQLERSKKE ASEGRQKAEK
401: NLFESSMMFK ARESSLRNEK KEVEERLTRE KADLEKEHIH VCNELQKANE QRAELESKLL QTNTLMEELQ QLQAELQREK DHAVKEAEEM RQTNGNSVFG
501: STSAVALTEF SYEIEEATDN FNDSKKIGSG GCGTVYKGFL RHTTVAIKKF NREGTTGDKE FNDEVETLSR MRHPNLVTLI GVCREAKALV FEFLSNGSLE
601: DCLQCENQRE PLSWRMRIRI AADICTGLIF LHSNKPKGIA HGDLKPDNVL LDNSFVCKLA DFGISRPLDL TNTTVTPYHR TNQIKGTMGY MDPGYIASGE
701: ITAQYDVYSF GVVLMRLLTG KSPLGLPNEV EAALSNDMLQ DIIDTSAGEW PPEYTEELAR LALRCCRYER KERPNLANEA WGILQAMMNC PDDKCKPPTF
801: FICPMTQEIM RDPHIAADGF TYEGEAIKDW LQRGHKMSPM TYLGFTHHEL IPNTALRFAI QEWQMQQQP

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.