Factsheet for TraesCS6D01G227800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G245400.1	Wheat	nucleus	88.37	95.18
HORVU6Hr1G064110.10	Barley	nucleus	80.42	88.9
OQU85675	Sorghum	cytosol	55.47	53.14
Zm00001d051399_P002	Maize	cytosol	47.22	49.69
TraesCS6D01G227900.1	Wheat	cytosol	41.45	46.28
GSMUA_Achr5P12380_001	Banana	cytosol	34.69	43.62
GSMUA_Achr8P11510_001	Banana	cytosol	33.4	39.53
TraesCS5D01G302100.1	Wheat	cytosol	30.22	39.33
TraesCS1D01G211400.1	Wheat	mitochondrion	28.53	36.65
CDX74774	Canola	nucleus, plastid	28.93	36.33
VIT_15s0046g02480.t01	Wine grape	cytosol	31.81	36.32
CDY27350	Canola	plastid	28.63	36.23
Bra004947.1-P	Field mustard	nucleus, plastid	28.63	35.96
CDY37074	Canola	plastid	29.22	35.85
AT2G45910.1	Thale cress	plastid	29.62	35.73
CDY18889	Canola	nucleus, plastid	28.53	35.7
Bra039305.1-P	Field mustard	plastid	29.32	35.59
KRG91553	Soybean	cytosol	25.84	35.23
KRH40448	Soybean	cytosol	30.82	35.11
PGSC0003DMT400000146	Potato	nucleus	31.11	35.09
KRH35280	Soybean	cytosol	24.55	35.04
VIT_16s0050g00690.t01	Wine grape	cytosol	29.22	35.0
KRH00764	Soybean	plastid	30.72	34.99
PGSC0003DMT400040840	Potato	cytosol	27.04	34.56
Solyc03g025450.2.1	Tomato	cytosol	26.94	34.43
Solyc01g094660.2.1	Tomato	cytosol	30.42	34.23
KRH48130	Soybean	plastid	29.62	33.79
KRH65013	Soybean	plastid	29.32	33.6
Bra019576.1-P	Field mustard	nucleus	20.68	33.44
TraesCS7D01G121000.1	Wheat	cytosol	23.56	32.83
TraesCS4D01G003800.1	Wheat	cytosol	23.76	32.52
AT3G49060.1	Thale cress	cytosol	25.75	32.17
Bra018013.1-P	Field mustard	cytosol	25.25	31.63
CDX86996	Canola	nucleus	24.75	31.48
CDY08105	Canola	cytosol	25.05	31.38
CDY05898	Canola	cytosol	24.85	31.33
CDY37899	Canola	cytosol	24.45	30.52
TraesCS5D01G302000.1	Wheat	plastid	26.44	29.23
TraesCS4D01G095000.1	Wheat	cytosol	20.97	28.13
TraesCS5D01G212200.1	Wheat	cytosol	22.27	28.11
TraesCS2D01G389400.2	Wheat	cytosol, nucleus, plasma membrane	15.11	27.84
TraesCS5D01G210500.1	Wheat	cytosol	23.16	27.67
TraesCS2D01G389200.1	Wheat	cytosol	14.02	27.59
TraesCS6D01G022900.1	Wheat	cytosol	18.79	27.23
TraesCS2D01G076700.1	Wheat	plastid	21.07	26.97
TraesCS7D01G520100.1	Wheat	cytosol	16.1	26.51
TraesCS6D01G172100.1	Wheat	plastid	19.78	25.81
TraesCS7D01G359000.1	Wheat	cytosol	19.68	25.78
TraesCS4D01G365900.1	Wheat	cytosol	19.58	24.23
TraesCS6D01G172000.1	Wheat	cytosol	16.7	23.17
TraesCS7D01G079400.2	Wheat	cytosol	18.99	22.63
TraesCS3D01G211800.1	Wheat	cytosol	16.3	22.16
TraesCS6D01G329000.2	Wheat	cytosol	16.6	21.06
TraesCS7D01G155500.1	Wheat	cytosol	16.6	20.72
TraesCS6D01G112900.1	Wheat	peroxisome	14.41	17.58

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6D01G227800	EnsemblPlants:TraesCS6D01G227800.1
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	TIGR:cd01989	TIGR:cd16655	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:318960616..318966099

Molecular Weight (calculated)

113976.0 Da

IEP (calculated)

6.613

GRAVY (calculated)

-0.594

Length

1006 amino acids

Sequence
(BLAST)

0001: MERDDGDDET FWSAQCSLSS STGDERDEQQ SSPGAEGTVF VALADDVNEG TSTLLWAMKN LAKDGSRVVI AHVRSPTRST HRMGVKAHHG SMRPEGVSNH
0101: RNLQRDKAGK NMDGYALTAK RATQDLEIDC DEVVIEMDDV AEGLAQLIAI HGITRLVMGA AADQHYSKEM KKPKSKTALK LMDTAAPSCK IWFICDGHLI
0201: CTSYKENLPA ISPSPVQRTT PSSVCRISSQ MRSMALKNEE ASSNGYNSAS SFESQMSDWD FLFGDWEKTT YISSRTDDAV GISGATTLPV IIGDAHKLRQ
0301: VKHSPTYESD GIHLVPECHM EEALLVDEET HFGHQEVYTV AELWKGHDES NKRDKATQDL LSALQRANVS EDSYLHEVNQ RKQIEEILTI QRLEIDEMKR
0401: RSYTLHDELQ DSKKQKLMLE QHIIQIETAR KDNVKEITDF FTEKSCEETK KCLKLEMDLL SALQKAREME NLYQNEKGRR LDMDVKITRQ RVEIEETKKH
0501: RDELYYELKD LKEHMLKLKI IDVPDETNRR RRAERDLLSA LEMVKDLEHG ILREMRKQKE VEEAHAIREE EIQAMIQQLA DINAKYISDM KSAIKFHEEE
0601: LEKSKHFIQE IQAKYDKSLH ERDTAVTEAK ELRQKNKHGA LVFSLSELQE ATKCFDISLK IGEGGSGRVY KGFLRNTTVA IKLLHCQRLQ RQQEFHQEVA
0701: FLSTVRHPNI MMFIGACQEA SGSGLVYEFL PNRSLEEHLS CKEKKNTPPL TWQVRTRIIG EIWSALTFIH SHKPLPIVHG DLKPDNILLD ANFVSKLRIC
0801: QVSKNPRATK NTKDPKFLTT GELTPQCDVY SFGIVILRLL TGRSSQKIVV TVEKAMEKGH LHSIIDDSAG SWPYQQAGQL ARLGLRCTNL SGKLQPDLIG
0901: GVWGELEPLM KAASRNAGRP SFAASSDDTH TPSGFVCAIS REVMHDPQIA ADGFTYEAEA IRTWLDSGHD TSPMTNLKLK HCDLTPNRAL HSAILEWQQQ
1001: QKKHGT

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.