Factsheet for TraesCS6A01G245400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G064110.10	Barley	nucleus	87.79	90.11
TraesCS6D01G227800.1	Wheat	nucleus	95.18	88.37
OQU85675	Sorghum	cytosol	56.21	50.0
Zm00001d051399_P002	Maize	cytosol	47.75	46.65
TraesCS6A01G245500.1	Wheat	cytosol	41.22	42.92
GSMUA_Achr5P12380_001	Banana	cytosol	36.08	42.12
TraesCS6A01G338300.1	Wheat	cytosol	24.95	40.1
TraesCS5A01G294700.1	Wheat	cytosol	31.26	37.82
GSMUA_Achr8P11510_001	Banana	cytosol	34.05	37.41
CDX74774	Canola	nucleus, plastid	29.55	34.46
VIT_15s0046g02480.t01	Wine grape	cytosol	32.44	34.39
TraesCS1A01G208100.1	Wheat	mitochondrion	29.34	34.38
CDY27350	Canola	plastid	29.23	34.34
CDY37074	Canola	plastid	29.98	34.15
KRH40448	Soybean	cytosol	32.23	34.09
CDY18889	Canola	nucleus, plastid	29.34	34.08
AT2G45910.1	Thale cress	plastid	30.41	34.05
KRH00764	Soybean	plastid	32.12	33.98
Bra004947.1-P	Field mustard	nucleus, plastid	29.12	33.96
Bra039305.1-P	Field mustard	plastid	30.09	33.9
KRG91553	Soybean	cytosol	26.77	33.88
KRH35280	Soybean	cytosol	25.48	33.76
PGSC0003DMT400000146	Potato	nucleus	32.12	33.63
VIT_16s0050g00690.t01	Wine grape	cytosol	29.66	32.98
TraesCS7A01G122700.1	Wheat	nucleus	25.48	32.83
Solyc01g094660.2.1	Tomato	cytosol	31.37	32.77
KRH48130	Soybean	plastid	30.51	32.31
TraesCS7A01G122600.1	Wheat	cytosol	24.95	32.23
PGSC0003DMT400040840	Potato	cytosol	26.87	31.89
Solyc03g025450.2.1	Tomato	cytosol	26.77	31.77
KRH65013	Soybean	plastid	29.76	31.66
Bra019576.1-P	Field mustard	nucleus	20.88	31.35
AT3G49060.1	Thale cress	cytosol	26.12	30.31
TraesCS4A01G220300.1	Wheat	cytosol	22.38	29.81
Bra018013.1-P	Field mustard	cytosol	25.48	29.64
CDY05898	Canola	cytosol	25.27	29.57
CDY08105	Canola	cytosol	25.27	29.39
CDX86996	Canola	nucleus	24.73	29.2
CDY37899	Canola	cytosol	24.73	28.66
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	22.38	28.36
TraesCS5A01G294600.1	Wheat	plastid	26.66	27.33
TraesCS5A01G203900.1	Wheat	cytosol	23.55	26.35
TraesCS5A01G205800.1	Wheat	cytosol	23.55	26.07
TraesCS6A01G018500.1	Wheat	cytosol	18.95	25.5
TraesCS2A01G079300.1	Wheat	plastid	21.52	25.44
TraesCS7A01G532900.1	Wheat	cytosol	15.85	24.87
TraesCS7A01G364200.2	Wheat	cytosol	19.91	24.22
TraesCS6A01G182800.1	Wheat	cytosol	17.45	22.33
TraesCS5A01G542700.1	Wheat	cytosol	19.16	22.21
TraesCS7A01G084400.4	Wheat	cytosol	19.7	21.96
TraesCS4A01G382900.1	Wheat	cytosol	19.06	21.58
TraesCS3A01G208900.1	Wheat	cytosol	16.92	21.32
TraesCS4A01G382700.4	Wheat	cytosol	18.74	20.96
TraesCS7A01G155200.1	Wheat	cytosol	17.02	19.73
TraesCS6A01G346100.2	Wheat	cytosol	17.13	19.51
TraesCS6A01G122700.2	Wheat	cytosol	15.2	16.8

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.30.40.10	MapMan:50.2.7	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SMART:SM00504	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS6A01G245400	EnsemblPlants:TraesCS6A01G245400.1
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	TIGR:cd16655	:	:	:

Description

No Description!

Coordinates

chr6A:-:456762370..456767991

Molecular Weight (calculated)

106575.0 Da

IEP (calculated)

7.052

GRAVY (calculated)

-0.587

Length

934 amino acids

Sequence
(BLAST)

001: MSVAPHDRPT KWGVKAHHGS MRPEEVSNHR NLQRDKTGKN MDEYALTAKR ATKDLEIDCD EVVIEMDDVA EGLAQLIAIH GITRIVMGAA ADQHYSKEMK
101: TPKSKTALKL MDTAAPSCKI WFICDGHLIC TSYKENLLAI SPSPVQRTTP SSVCRISSQM RSMALKNEEA SSKGYNSASS FESQMSDWDF LFGDWEKTTY
201: ISSRTDDAVS ISGATTLPVI IGDAHKLRQV KHSPTYESDG IHLVPECHME EALIVDEETH FGHQEVYTVA ELWKGHDESN KCDKAADLLS ALQRAKVSED
301: TYLHEVNQRK QIEEILTIQR LEIDEMKRRR YALHDELQDS KKQKLMLEQH IIQIETARKD NVKEITDFFT EKSCEETKKC LKLEMDLLSA LQKAREMENL
401: YQNEKGQRLD MDVKITRQRV EIEETKKHRD ELYYELKDLK EHILRLKIID APEETNRRRR AERDLLSALE MVKELEHGIL REMRKRKAVE EAHAIREEEI
501: QAMIRQLADI NAKYISDMKS AIKFHEQELE KSKHFIQEIQ AKYDKSLHER DTAVTEAKEL RQKNKHGALV FSLSELQQAT KCFDISLKIG EGGSGRVYKG
601: FLRNTTVAIK LLHCQRLQGQ QEFHQEVAFL STVRHPNIMM FIGACQEASG SGLVYEFLPN RSLEEHLSCK EKKNTPPLTW QVRTRIIGEI WSALTFIHSH
701: KPLPIVHGDL KPDNILLDAN FVSKLRICQV SKNPRATKNT KDPKFLTTGE LTPQCDVYSF GIIILRLLTG RSSQKIVVTV EKAMEKGHLH SIIDDSAGSW
801: PYQQADQLAR VGLRCTNLSG KRQPDLIEGV WGELEPLMKA ASWNAGRPSF AASSDDTHTP SSFVCAISQE VMRDPQIAAD GFTYEAEAIR RWLDSGHDTS
901: PMTNLKLKHC DLTPNRALHS AILEWQQQQK KHGT

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.