Factsheet for TraesCS4A01G382900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G085100.1
TraesCS6B01G117400.1
TraesCSU01G114000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	TraesCS6A01G085100.1	AT5G64330.1	16777956
AT4G25160.1	TraesCS6B01G117400.1	AT5G64330.1	16777956
AT4G25160.1	TraesCSU01G114000.1	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G079400.2	Wheat	cytosol	95.76	93.6
TraesCS4A01G382700.4	Wheat	cytosol	89.7	88.62
TraesCS7A01G084400.4	Wheat	cytosol	84.73	83.41
HORVU7Hr1G018700.1	Barley	cytosol, plastid	68.85	77.49
Os06t0140800-01	Rice	plasma membrane	68.61	70.22
KXG19255	Sorghum	cytosol	67.88	69.39
Zm00001d045397_P001	Maize	cytosol	59.03	64.33
VIT_16s0013g01920.t01	Wine grape	cytosol	46.06	48.47
GSMUA_Achr11P...	Banana	cytosol	44.61	46.06
KRH56330	Soybean	cytosol, plasma membrane, plastid	44.0	45.43
PGSC0003DMT400048527	Potato	cytosol	44.36	45.3
Solyc03g093450.2.1	Tomato	nucleus	44.36	45.3
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	28.85	44.99
GSMUA_Achr5P21060_001	Banana	cytosol	43.64	44.83
KRH62634	Soybean	cytosol	43.52	44.32
Solyc05g051610.1.1	Tomato	cytosol	44.73	43.98
PGSC0003DMT400018596	Potato	cytosol	44.85	43.68
AT4G25160.1	Thale cress	plastid	42.3	41.8
Bra013868.1-P	Field mustard	plastid	42.55	41.79
CDY34347	Canola	plastid	42.55	41.79
CDY00462	Canola	mitochondrion, plasma membrane	32.12	41.6
Bra019185.1-P	Field mustard	plastid	40.73	41.58
CDX92680	Canola	plastid	40.73	41.58
CDY11059	Canola	plastid	40.85	41.5
CDY00464	Canola	cytosol	38.91	41.37
Bra012943.1-P	Field mustard	cytosol	36.0	41.36
CDX99935	Canola	cytosol	36.85	40.97
CDY02134	Canola	cytosol	38.18	40.86
TraesCS6A01G018500.1	Wheat	cytosol	34.06	40.49
CDY23058	Canola	cytosol, plastid	38.55	40.15
CDY42870	Canola	cytosol	38.55	40.15
Bra015198.1-P	Field mustard	cytosol	36.97	40.08
Bra022543.1-P	Field mustard	plastid	38.3	39.95
CDY02135	Canola	cytosol	40.85	39.93
CDY16329	Canola	plastid	38.3	39.9
Bra029318.1-P	Field mustard	cytosol	38.3	39.9
Bra012944.1-P	Field mustard	cytosol	39.03	39.75
CDY23059	Canola	cytosol	40.85	39.74
CDX87220	Canola	cytosol, peroxisome, plasma membrane	39.76	39.66
AT5G61560.3	Thale cress	cytosol	39.15	39.63
CDY00461	Canola	cytosol	38.06	39.55
AT5G61550.2	Thale cress	cytosol	41.21	39.53
AT5G51270.1	Thale cress	cytosol	38.55	39.5
CDY68766	Canola	cytosol, plastid	37.82	39.39
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	40.61	39.18
CDY16813	Canola	cytosol	39.39	39.16
CDX91574	Canola	plastid	37.7	38.97
Bra035920.1-P	Field mustard	cytosol	37.09	38.69
CDY16812	Canola	cytosol	37.21	38.52
CDY42871	Canola	cytosol	37.58	37.71
Bra015196.1-P	Field mustard	cytosol	30.06	37.58
CDY61455	Canola	cytosol	36.61	37.24
TraesCS5A01G542700.1	Wheat	cytosol	35.76	36.6
CDX87221	Canola	cytosol	32.0	35.87
TraesCS7A01G364200.2	Wheat	cytosol	29.94	32.16
TraesCS3A01G208900.1	Wheat	cytosol	27.88	31.04
TraesCS6A01G182800.1	Wheat	cytosol	26.67	30.14
TraesCS5A01G294700.1	Wheat	cytosol	26.91	28.76
TraesCS6A01G338300.1	Wheat	cytosol	19.52	27.71
TraesCS7A01G155200.1	Wheat	cytosol	26.91	27.54
CDY03375	Canola	plastid	42.42	26.99
TraesCS6A01G346100.2	Wheat	cytosol	26.79	26.95
TraesCS7A01G532900.1	Wheat	cytosol	19.39	26.89
TraesCS6A01G245500.1	Wheat	cytosol	29.09	26.76
TraesCS6A01G122700.2	Wheat	cytosol	27.27	26.63
TraesCS1A01G208100.1	Wheat	mitochondrion	25.33	26.22
TraesCS5A01G203900.1	Wheat	cytosol	25.7	25.39
TraesCS5A01G205800.1	Wheat	cytosol	25.21	24.64
TraesCS5A01G294600.1	Wheat	plastid	26.42	23.93
TraesCS2A01G079300.1	Wheat	plastid	22.42	23.42
TraesCS7A01G122600.1	Wheat	cytosol	20.0	22.82
TraesCS2A01G391300.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane, plastid	19.88	22.25
TraesCS7A01G122700.1	Wheat	nucleus	19.52	22.21
TraesCS4A01G220300.1	Wheat	cytosol	18.79	22.11
TraesCS6A01G245400.1	Wheat	nucleus	21.58	19.06

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004842	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00582
PFAM:PF04564	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003
PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504
SUPFAM:SSF52402	SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4A01G382900	EnsemblPlants:TraesCS4A01G382900.1
InterPro:Ubox_domain	InterPro:UspA	InterPro:Znf_RING/FYVE/PHD	TIGR:cd01989	TIGR:cd16655	SEG:seg

Description

No Description!

Coordinates

chr4A:+:660916378..660922098

Molecular Weight (calculated)

90417.0 Da

IEP (calculated)

6.714

GRAVY (calculated)

-0.384

Length

825 amino acids

Sequence
(BLAST)

001: MSMEIEEEDS GETAPEMEAP GVSTVAIAVS GSRSSRHALK WALDKFVPGG RVLFRILHVR PPITMVPTPM GNYIPVSQVR DDVASAYREE LEWQARNMLL
101: PYKKMCAQTQ VEAEAVLLES DDVPAAISEE IDKFNIGKLV LGSSSRSIFR RKLKGSKTAT KISECIPSFC TAYVISKGKL SFVHSATSDA CETPKTISSS
201: TVSSPSSRSL SSAPSECAER NGAAAVLFRQ SSLSSQRDHA LANINRRASP SGSGGSEISY HADTTLMTNS HSIASGAQLS SSSSSGDSVY KSFRRDSSPD
301: IPDLQAEVSE IATSLKHSHD QDDLTLQIES MKVKLQHLQK LHECAHTEPV DSTQKLHNNL GIHRVEHEVK LREIDLTEEI VRRLLRRMER EEEEVAEREA
401: QPIQSSSGQK STEGDGDHQN AGEINTGLKN AGRFLTEYNR YSWEHIQAAT SSFSSDLVIG KGTYGTVYKA KFQHTVAAVK VLNSLEGFGT QQLQQELEVL
501: GKIRHPHLLL LLGACPERGC VVYEYMENGS LDDALHHRRN GTRPLAWYDR VRVAWEVATA VAFLHNARPD PIIHRDLKPA NILLDRNLSS KVGDVGLSTA
601: LLHHSGAGGG AGQQQSTMVR NTTPVGTFCY IDPEYQRTGA VSAKSDVYAL GVVMLQLLTG RTSPLGLAHA VETALEEDGG DSFAEMLDAT AGQWPPEEAR
701: ELAALALQCA EMRRRDRPGL REHILPVLER IKDVAARAAR ETKALLLRTA SSSAAPGHFL CPILQEIMED PCVAADGYTY DRKAIETWVS MKDKSPMTNL
801: RLPSKSLIPN HSLRSAIIDW SSKNR

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.