Factsheet for Bra013868.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
plasma membrane 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024285.1-P
Bra037773.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25160.1	Bra024285.1-P	AT5G64330.1	16777956
AT4G25160.1	Bra037773.1-P	AT5G64330.1	16777956

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34347	Canola	plastid	99.64	99.64
AT4G25160.1	Thale cress	plastid	87.86	88.38
Bra019185.1-P	Field mustard	plastid	80.0	83.17
Bra015198.1-P	Field mustard	cytosol	55.6	61.37
Bra022543.1-P	Field mustard	plastid	57.62	61.19
VIT_16s0013g01920.t01	Wine grape	cytosol	54.64	58.55
Bra029317.1-P	Field mustard	cytosol, nucleus, plastid	58.69	57.66
Bra035920.1-P	Field mustard	cytosol	54.29	57.65
Bra015196.1-P	Field mustard	cytosol	44.29	56.36
Bra012944.1-P	Field mustard	cytosol	54.29	56.3
Solyc03g093450.2.1	Tomato	nucleus	52.02	54.08
PGSC0003DMT400048527	Potato	cytosol	51.43	53.47
KRH56330	Soybean	cytosol, plasma membrane, plastid	49.52	52.07
Solyc05g051610.1.1	Tomato	cytosol	51.79	51.85
KRH62634	Soybean	cytosol	49.52	51.36
PGSC0003DMT400018596	Potato	cytosol	51.67	51.24
Bra012943.1-P	Field mustard	cytosol	42.26	49.44
Bra029318.1-P	Field mustard	cytosol	45.48	48.23
Os06t0140800-01	Rice	plasma membrane	43.45	45.29
KXG19255	Sorghum	cytosol	43.33	45.11
GSMUA_Achr5P21060_001	Banana	cytosol	42.38	44.33
GSMUA_Achr11P...	Banana	cytosol	41.9	44.06
TraesCS4A01G382900.1	Wheat	cytosol	41.79	42.55
TraesCS7D01G079400.2	Wheat	cytosol	42.62	42.42
Bra008047.1-P	Field mustard	cytosol	19.76	42.35
Zm00001d045397_P001	Maize	cytosol	38.1	42.27
TraesCS4A01G382700.4	Wheat	cytosol	40.6	40.84
TraesCS7A01G084400.4	Wheat	cytosol	40.48	40.57
HORVU7Hr1G018750.2	Barley	cytosol	37.98	38.76
HORVU7Hr1G018700.1	Barley	cytosol, plastid	30.83	35.33
Bra002768.1-P	Field mustard	cytosol	31.19	34.7
Bra006836.1-P	Field mustard	plastid	32.5	34.64
Bra032100.1-P	Field mustard	cytosol	30.83	33.99
Bra013166.1-P	Field mustard	cytosol, nucleus, plastid	27.38	33.92
Bra008921.1-P	Field mustard	cytosol	27.98	33.67
Bra020547.1-P	Field mustard	cytosol	28.21	33.66
Bra040779.1-P	Field mustard	cytosol	25.83	33.38
Bra023358.1-P	Field mustard	cytosol	27.5	33.38
Bra038999.1-P	Field mustard	cytosol	32.02	32.93
Bra024016.1-P	Field mustard	cytosol	30.0	32.77
Bra007857.1-P	Field mustard	cytosol	31.07	32.75
Bra025965.1-P	Field mustard	cytosol, nucleus, plastid	22.26	32.69
Bra035539.1-P	Field mustard	cytosol	27.62	32.45
Bra008387.1-P	Field mustard	nucleus	28.21	31.18
Bra026027.1-P	Field mustard	nucleus	27.86	30.71
Bra035805.1-P	Field mustard	nucleus	27.62	30.29
Bra016035.1-P	Field mustard	cytosol, nucleus, plasma membrane	24.76	30.14
Bra026707.1-P	Field mustard	cytosol, nucleus, plasma membrane	27.5	29.73
Bra016596.1-P	Field mustard	plasma membrane	26.67	29.36
Bra016631.1-P	Field mustard	cytosol	26.31	29.35
Bra019576.1-P	Field mustard	nucleus	20.83	28.14
Bra039305.1-P	Field mustard	plastid	27.02	27.38
Bra004947.1-P	Field mustard	nucleus, plastid	25.71	26.97
Bra012181.1-P	Field mustard	plastid	32.14	26.73
Bra018013.1-P	Field mustard	cytosol	23.21	24.28
Bra035078.1-P	Field mustard	cytosol	28.45	19.43
Bra020364.1-P	Field mustard	extracellular, plastid	0.24	1.01
Bra035077.1-P	Field mustard	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	EnsemblPlantsGene:Bra013868
EnsemblPlants:Bra013868.1	EnsemblPlants:Bra013868.1-P	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083	InterPro:IPR014729
InterPro:Kinase-like_dom_sf	UniProt:M4DBK8	PFAM:PF00069	PFAM:PF00582	PFAM:PF04564	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF56112
SUPFAM:SSF57850	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002546838	InterPro:Ubox_domain	InterPro:UspA	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

AT4G25160 (E=0.0) | protein kinase family protein

Coordinates

chrA01:-:8134520..8138023

Molecular Weight (calculated)

94287.6 Da

IEP (calculated)

6.444

GRAVY (calculated)

-0.513

Length

840 amino acids

Sequence
(BLAST)

001: MSRSPDTLAL PPPPPTFPPP SHTVFVALSE SRKNKNVVTW ALEKFAPEAN VGFKLLHIHP RITSVPTPMG NTIPISEVRD DVVAAYRQEV LWQAEEVLKP
101: YKKMFERRKV AVEVHVIESD NVAAAIAEVV SRNSIERLVI GGSSRSFFSR KADMCSAISA LVPNFCTVYV VSKGKLSCVR PSDSDGNATI RDDGSERTDS
201: SSGSSGPNSE STDGVSSALD SQSQSRALSL PVRRFQHVPA IGRQASVPMD TSSVGSDDTR CMSMDAEEAK DVSSINRSST DTTSRWTPRL RDYEERKDAM
301: SSSSSNREYG NAGGKFSWTG MVIDTTHSRA SQQASNMSDN LTEHSYTDNQ VNLSFEVEKL RAELRHVQEM YTAAQTETFD ASRKLGELNQ RRLEEAIKLE
401: ELKLKEYEAR ELAEKEKQNF EKAKRDAESM RERAEREIAQ RREAERKAAR DAKEKEKLED TLGSPRLQYQ HFTWEEIVAA TSSFSEELKI GMGAYGSVYK
501: CNMHHTTAAV KVLHSAENGL SKQFQQELEI LSKIRHPHLV LLLGACPEQG ALVYEYMENG SLEDRLFQVN NSPPLPWFER VRIAWEVAAA LVFLHKSKPK
601: PIIHRDLKPA NILLDHNFVS KVGDVGLSTM VQVDPLSTKF TIYKQTSPVG TLSYMDPEYQ RTGMISSKSD VYSFGMIVLQ LLTAKPPMAL THLVESAMDS
701: NDEFLKILDQ KAGNWPVEET RELTSLALCC TELRGKDRPD LRDQILPALE SLKKVAEKAR NSISSVPTQP PFHFLCPLLK DVMNEPCVAA DGYTYDRRAI
801: EEWFEEHNTS PMTDSPLLSK NLLPNYTLYT AIMEWRSRLK

Best Arabidopsis Sequence Match ( AT4G25160.1 )
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Arabidopsis Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.