Factsheet for AT4G25160.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013868.1-P	Field mustard	plastid	88.38	87.86
CDY34347	Canola	plastid	88.26	87.74
CDY12184	Canola	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	54.01	85.26
CDX92680	Canola	plastid	77.25	79.83
Bra019185.1-P	Field mustard	plastid	76.77	79.33
CDY11059	Canola	plastid	76.89	79.06
AT5G51270.1	Thale cress	cytosol	60.84	63.11
VIT_16s0013g01920.t01	Wine grape	cytosol	54.61	58.16
AT5G61550.2	Thale cress	cytosol	59.28	57.56
CDY03375	Canola	plastid	87.19	56.13
Solyc03g093450.2.1	Tomato	nucleus	52.81	54.58
PGSC0003DMT400048527	Potato	cytosol	52.22	53.96
KRH56330	Soybean	cytosol, plasma membrane, plastid	49.94	52.19
KRH62634	Soybean	cytosol	50.06	51.6
Solyc05g051610.1.1	Tomato	cytosol	51.14	50.89
PGSC0003DMT400018596	Potato	cytosol	51.14	50.41
AT5G61560.3	Thale cress	cytosol	45.51	46.63
Os06t0140800-01	Rice	plasma membrane	43.95	45.53
KXG19255	Sorghum	cytosol	43.95	45.48
GSMUA_Achr5P21060_001	Banana	cytosol	42.16	43.84
GSMUA_Achr11P...	Banana	cytosol	41.92	43.8
Zm00001d045397_P001	Maize	cytosol	38.8	42.8
TraesCS4A01G382900.1	Wheat	cytosol	41.8	42.3
TraesCS7D01G079400.2	Wheat	cytosol	42.4	41.94
TraesCS4A01G382700.4	Wheat	cytosol	40.24	40.24
TraesCS7A01G084400.4	Wheat	cytosol	40.36	40.21
HORVU7Hr1G018750.2	Barley	cytosol	37.84	38.4
HORVU7Hr1G018700.1	Barley	cytosol, plastid	30.78	35.06
AT2G07020.1	Thale cress	cytosol	28.5	34.0
AT5G57035.1	Thale cress	cytosol, plastid	32.1	33.97
AT5G12000.1	Thale cress	cytosol	28.5	33.95
AT2G24370.1	Thale cress	cytosol	31.38	33.25
AT5G26150.2	Thale cress	cytosol	28.02	32.91
AT2G19410.2	Thale cress	cytosol	32.34	32.85
AT5G35380.1	Thale cress	cytosol	28.14	32.15
AT1G72760.2	Thale cress	cytosol	26.83	32.0
AT4G31230.1	Thale cress	cytosol	29.1	31.81
AT1G17540.1	Thale cress	cytosol	27.31	31.32
AT1G78940.2	Thale cress	cytosol	28.02	31.03
AT1G16760.2	Thale cress	cytosol	27.9	30.58
AT3G20200.1	Thale cress	cytosol	28.02	30.0
AT2G45910.1	Thale cress	plastid	27.78	27.82
AT3G49060.1	Thale cress	cytosol	23.47	24.35

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.30.40.10	Gene3D:3.40.50.620	EntrezGene:828619
ProteinID:AEE85018.1	EMBL:AL035396	ArrayExpress:AT4G25160	EnsemblPlantsGene:AT4G25160	RefSeq:AT4G25160	TAIR:AT4G25160
RefSeq:AT4G25160-TAIR-G	EnsemblPlants:AT4G25160.1	TAIR:AT4G25160.1	Unigene:At.32287	EMBL:BX828107	ProteinID:CAB36758.1
ProteinID:CAB79425.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0004842	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR003613	InterPro:IPR013083
InterPro:IPR014729	InterPro:Kinase-like_dom_sf	RefSeq:NP_194246.2	PFAM:PF00582	PFAM:PF04564	PFAM:PF07714
PO:PO:0000037	PO:PO:0000256	PO:PO:0000262	PO:PO:0001078	PO:PO:0001185	PO:PO:0004507
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF29	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	UniProt:Q9SW11	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SMART:SM00504	SUPFAM:SSF52402
SUPFAM:SSF56112	SUPFAM:SSF57850	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000034F113	InterPro:Ubox_domain
InterPro:UspA	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

PUB35U-box domain-containing protein 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9SW11]

Coordinates

chr4:-:12903180..12907596

Molecular Weight (calculated)

93759.1 Da

IEP (calculated)

6.481

GRAVY (calculated)

-0.491

Length

835 amino acids

Sequence
(BLAST)

001: MSRSPDKLAL PPPPPPPPSR TVVVALSGSS KSKYVVTWAI EKFATEGNVG FKLLHIHPMI TSVPTPMGNA IPISEVRDDV VTAYRQEILW QSEEMLKPYT
101: KLFVRRKVAV EVLVIESDNV AAAIAEEVTR DSIDRIVIGG SSRSFFSRKA DICSVISALM PNFCTVYVVS KGKLSCVRPS DSDGNATIRE DGSERTNSSS
201: GSSGPTSDSS DVMSSAHDSQ SRPLSLPVRR MQHFPAIAGQ ASVPMETSSV GSDETRCMSL DAEEARDVSS INRSSTDTTS RWTPRRRDYE ERKEAMSSSS
301: SNREYGNFGT RFSWSGMGVD TTHSRASQQA SNMSDALSEQ SYTDNQVNLN FEVEKLRAEL RHVQEMYAVA QTETFDASRK LGELNQRRLE EAIKLEELKL
401: KEYEARELAE KEKQNFEKAR RDAESMRERA EREIAQRREA ERKSARDTKE KEKLEGTLGS PQLQYQHFAW EEIMAATSSF SEELKIGMGA YGAVYKCNLH
501: HTTAVVKVLQ SAENQLSKQF QQELEILSKI RHPHLVLLLG ACPEQGALVY EYMENGSLED RLFQVNNSPP LPWFERFRIA WEVAAALVFL HKSKPKPIIH
601: RDLKPANILL DHNFVSKVGD VGLSTMVQVD PLSTKFTIYK QTSPVGTLCY IDPEYQRTGR ISSKSDIYSF GMILLQLLTA KPAIALTHFV ESAMDSNDEF
701: LKILDQKAGN WPIEETRELA ALALCCTELR GKDRPDLKDQ ILPALENLKK VAEKARNSFS GVSTQPPTHF ICPLLKDVMN EPCVAADGYT YDRHAIEEWL
801: KEHNTSPMTD SPLHSKNLLP NYTLYTAIME WRSTR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.